Thamnophis sirtalis (common garter snake): 106537786
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Entry
106537786 CDS
T06107
Symbol
PCDH8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106537786 (PCDH8)
Cell adhesion molecules [BR:
tsr04515
]
Cadherins
Protocadherins
106537786 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
106537786
NCBI-ProteinID:
XP_013907507
UniProt:
A0A6I9X124
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All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MGARKDGGCPAVPSSPTGILCLAWLLLASAVGKTIRYHTYEEEPPGTVIGTLADELPLKG
ASGVERTFRLVKAPGNGSLVRVRERDGQLSLGPERLDREQLCGPSESPCLLAFDVLSLGG
PATPGASPFRLVHVELEVRDLNDHAPRFPQPAVALEVSESAAPGTRLPLPLAHDPDAGSN
GLQSFSLSPGSPFGLEAQRRADGLRCAELVLLRELDREAQAGYRLELVATDGQQQEEEEE
EAGWAAVSEAAPAQSLVALVSTSDSDAGANGQVRCALLPAPHQPFALQRAYDAASYLLLT
TGPLDRERVAEYNLTLVAEDLGSPPAKTVRSLTVRVADENDNAPRFAKARYEVALPENNP
PGAYLTTVAASDPDLGPNGKVTYRLLDNQIMGASISTYVSVDPGTGAIYALRTFNYEILK
EMELSIQASDGGSPSLSTTAMVKVRVMDQNDNAPVITSPALTNGSLEIGVSSRASRESLV
ARIKARDADEGSSSELSFTFSEDPQQQERSLDLFAINQKTGEVTLRRSLSEEQLGQVYPL
LLTVADSGLPPLSTTVVVNFLVTASLPPSSGQDSAAKPGSWEDQPLQWDVPLIVIIILAG
SCTLLLVAIITIATTCNQRKKEKKVVLDEPLDTSHLEKGHEEGSTGDGALHPSSPRFDVH
SFPSKSSFASPEPSPASEDIPASENSRETNSLYDSQSRLRGANAEVISHTFSCQG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccgcaaagacggcggttgccccgccgtgccaagctccccgacgggcatcctc
tgcctggcttggctgctgctggcctcggcggtgggcaagacgatccgctaccacacctac
gaggaagagccgcccggcacggtgatcgggaccttggccgacgagctgcctctgaaaggc
gcgtcaggagtggaaaggactttccggctggtgaaggcgccgggcaacgggtcgctggtg
cgagtgcgggagcgggacgggcagctgagcctgggcccggagcggctggaccgggagcag
ctgtgcggcccgtcggagtcgccctgcctgctggccttcgacgtgctgagcctgggaggc
cctgcgaccccgggcgcttcgcctttccgcctggtgcacgtggagctggaggtgcgggac
ctgaacgaccacgcgccgcgcttcccgcagcccgccgtggccctggaggtgtcggagagc
gcggcgcccggcacccgcctgccgctgcccctggcgcacgacccggacgccggctctaac
gggctgcagagcttctccctctcgccgggcagccccttcggcttggaggcgcagcgccgt
gccgacggcctccgctgcgccgagctggtgttgctgcgcgagctggaccgggaggcgcag
gccggctaccggctggagctggtggccacggacggccagcagcaggaggaggaggaggag
gaggccggctgggcggcggtgagcgaggcggcgccggcccagagcctggtggcgctggtc
agcacctcggacagcgacgcgggcgccaacggccaggtgcgctgcgccctcctgccggcg
ccccaccagcccttcgccctgcagcgcgcctacgacgccgccagctacctgctgctgacc
accgggcccctggaccgcgagcgcgtggccgagtacaacctgacgctggtggccgaggac
ctgggctctcccccggccaagaccgtccgctcgctcaccgtccgcgtggccgacgagaac
gacaacgccccgcgcttcgccaaggcgcgctacgaggtggccctgcccgagaacaacccc
ccgggggcctacctgaccaccgtggccgcctccgaccccgacctggggcccaacggcaaa
gtgacctaccgcctgctggacaaccaaatcatgggcgcctcgatctccacctacgtttct
gtcgatccgggcacgggagccatctacgccctgcggactttcaactatgagatcctgaag
gagatggagttgtccatccaagcgtcggatgggggatctccttcgctctccactacggcc
atggtcaaggtacgggtgatggaccagaacgacaacgctccggtcattacttctcctgcg
ctcaccaacggctctcttgaaattggcgtctccagcagagcttctcgagagtccctggtt
gcgcgcatcaaggcccgagatgcagacgagggctccagctcagagctgagcttcactttc
tcagaggatcctcagcaacaggaaagatctctggatctttttgccatcaaccagaaaaca
ggggaggtcacgctccggaggagcttatctgaagagcagctgggccaagtctatcccttg
cttctcaccgtggccgatagtgggctgccacctctctccaccaccgtggtggtcaacttc
ctggtgaccgcctcgctgcctccctctagtggccaggattccgcggccaagcccggctct
tgggaagaccaaccgttgcaatgggacgtccctttaatcgtcatcattatcctggcggga
agctgtacgttgctcctggtggccatcatcaccatcgccaccacgtgcaatcagcggaag
aaggagaagaaggtggtcttggacgaacctctggacacttctcacctggagaaggggcac
gaggaaggaagcacgggggacggggccctccacccttccagtcctcgcttcgacgtccat
tccttccccagcaagtcttctttcgctagcccggagccctctccggccagtgaagatatc
ccagcgtccgagaatagtcgagaaaccaacagcctctacgacagccagagccgactccga
ggagccaacgcagaggtaatctcccacactttctcttgccaggggtag
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