KEGG   Thamnophis sirtalis (common garter snake): 106539416
Entry
106539416         CDS       T06107                                 
Symbol
BICC1
Name
(RefSeq) protein bicaudal C homolog 1
  KO
K18756  protein bicaudal C
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsr03019]
    106539416 (BICC1)
Messenger RNA biogenesis [BR:tsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106539416 (BICC1)
SSDB
Motif
Pfam: KH_BICC1 SAM_1 KH_1 SAM_2 KH-I_KHDC4-BBP KH_Vigilin SAM_Ribosomal_mS41 GM130_C
Other DBs
NCBI-GeneID: 106539416
NCBI-ProteinID: XP_013909680
UniProt: A0A6I9XYW9
LinkDB
Position
Unknown
AA seq 678 aa
MMGRNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVLMF
DMKEEIDVEPHFITQLMEQLDVFISIKPKPKQTSKSVIVKSVERNALNMYEARKCLLGLE
SNGIAVATHPSPISCPVGLPCPGLDILTSAGLGLTGLGLLGPTTLSVNTSTSPNSLLNAL
NSSVSPLQSPSSNTPSSTFWASSIANTSTTGFSAIPHLMMPPTAQATLTSILLSGVPNYS
QSTPSPPPGLTPVDIHVNGMQVENKKNATSSLNGHVKTSAMKYPAFSATALGENVLSANH
SEPSRTIGSHNASEQVTAKTNPGEGCNDAFVEVGMPRSPSHSANANDLKQMMSASKQSCT
KRQAVELLQGTKNSHLHAGERLLSDSEMSASETTVADKKAPGSERAAERAAVAQQNSERA
HLGPQSTYVDMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKEL
RRANHVAYKPSMSTTYEGSSMSLSRSNSREHLGSGSDSDNWRDHNGISSTAPGDFVSSIG
SPKRKQKSSEHYLSSSNYMDCISSLIGSNGCNLNSLFKGSDLPELFSKLGLGKYTDIFQQ
QEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPSNVRASFLEGGAS
GRLSHQYHSDIASVSGRW
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgatgggccgaaacggcagcaacatcaagcatatcatgcagagaactggtgctcagatc
cacttccccgatcctagtaatccccagaagaaatccacagtctacctccaaggcacaatc
gaatcagtctgccttgccagacaatatctcatgggctgccttcctcttgtgctgatgttt
gatatgaaggaagaaattgacgtagaaccacattttattacccagctgatggagcagcta
gatgtcttcatcagtattaaaccaaagccaaagcagacgagtaagtctgtgattgtgaag
agcgttgagcgaaatgccttaaatatgtacgaagcacggaaatgtctcctgggtctggaa
agcaacggcattgccgtagcaacacacccctcccccatctcttgcccagttggccttcct
tgccctggcttggacatcttgacctcagctggccttggactaactggacttggtcttttg
ggtccaaccactttatctgtcaacacatccacatctccaaactccctcctaaatgctctc
aatagttcggttagtcctttgcagagtccaagttcaaacacgccaagttcaactttctgg
gcttcctcaatcgctaatacaagcactacaggtttctctgctattcctcacctgatgatg
ccgcctactgcacaagccacattaaccagtatcctgttgtcgggagtgcccaactacagt
caaagcacaccgtctccccctcctggcttaacacctgttgatattcatgtgaatggcatg
caagtagagaacaagaaaaatgcaacctcatcattaaatggtcatgtaaagacctcagct
atgaagtatcctgcattctctgccacagctctcggtgaaaatgtattaagtgcaaaccac
agcgaaccttctcggacgattggtagccataatgcctctgaacaagtgacggccaagaca
aaccctggcgaaggttgcaatgatgcttttgtagaagtgggcatgccccggagtccttcg
cactccgctaatgccaacgatctcaagcagatgatgagcgcctcgaagcaatcctgcaca
aagaggcaggcggtggaattactgcaaggcaccaaaaattctcatttacacgcgggcgag
agattgctgtcggattctgagatgagtgcttcagagaccacagtggctgataaaaaggca
cctggaagtgaaagggcagcagagagggcggccgtggcacagcagaactctgaaagagca
cacctgggcccccagtcgacatatgtggacatgcaggcatttgactacgaacagaagaag
ctactggcaaccaaagctatgctgaaaaagcctgttgttacggaggtgagaactcccacc
aacacctggagtgggttgggcttttccaaatcgatgccagccgaaacaattaaggagctg
aggagggccaaccacgtagcctacaaaccatctatgtcgacaacctatgagggttcctcc
atgtctctctcccgatccaacagccgggaacacctggggagcgggagcgattccgataac
tggagagatcacaatggcatcagttcaactgctccgggcgactttgtttcttccatcggc
agccctaaacggaaacagaaatcaagcgagcattatctcagcagtagcaactacatggat
tgcatctcctccctgattggaagcaacggctgtaacctgaacagtctgtttaagggatct
gacctacctgagttattcagcaaactgggcctgggtaaatacacagacatatttcagcaa
caagagattgatcttcagacgttcctcacgctaacagatcaggatctgaaagagcttgga
attaccacttttggtgcacgaaggaaaatgcttctggcaatctcagaactgaacaaaaac
cgaagaaaactctttgaaccctccaatgtccgagcctcgtttctggaaggcggcgctagt
ggacggctgtctcaccaataccattcggacattgccagcgtgagcggtcgttggtag

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