Thamnophis sirtalis (common garter snake): 106547494
Help
Entry
106547494 CDS
T06107
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106547494 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106547494 (CNGB1)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106547494 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106547494
NCBI-ProteinID:
XP_013920174
UniProt:
A0A6I9XVJ6
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MSRPTRAVELVRLVPKKPRRHLHASLSCSAVVEELPNVPSYHSSAPPSHIPVLVPRKAKA
GLSNPGFRKEEASCLAVGGQPTGKYPTVKFPKVDSGSSRLPIPASQARPSAPKSLHTLAV
PPTPKAPKRRKSSSQEVNVEELRLSPVNAWPDQSSPQEEPSSSPRRGSSAASQSSAIIND
RLQELVRLFKDRTEKVKEKLTDPDASSEDETPAASPSKEKISEEKDKKAEEDGEGRFHEI
LCCRFKYHPFLCHMRRVQFPSSIDPSSNLMYVLWLLLVVLAWNWNCWLIPVRWAFPYQSP
ENVYYWMAIDYLCDFIYFLDIAVFQVRLQFVHQGDIITDKRAMRKNYLKSHRFKMDALCL
LPLDFFYFKVGVHPLLRLPRCLKYLAFFEFNNRLEAILSKAYVYRVVRITAYLLFSLHLN
SCLYYWASSFQGIGSTAWVYDGRGNSYIRCYYWAVKTLITIGGLPEPHNLFEIVFQLLNY
FTGVFAFSVMIGQMRDVVGAATAGQSYYRSCMDNTIKYMALYRIPRSVQNRIKTWYEYTW
HSQGMLDESELLLQLPEKMKLDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKRLRSVVYLP
NDYVCKKGEIGREMYIIQVGQVQVLGGPDGKTILVTLKAGSVFGEISLLAVGGGNRRTAN
VVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRNNTRPKEEKVLIIPPRVGTP
KLFQAALVAAGRMGGKGRLAHLRWKLKELKAIQAATSTPVVSKSAASHASPAGSPKPNNC
GTETKTSRSPDHPVRVSMSPTPAGDEEVLLVEVLEKGEPK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccaacccgcgctgtcgagctggttcgcctggtgcccaagaagccacgccgt
catctgcatgcctccctttcctgctcagccgtcgtggaagagttgcccaatgtccccagc
taccacagctctgctcctccctcccacatccctgtcctcgtccctaggaaagcgaaggct
ggcctgagcaaccccggttttcggaaggaagaagcttcctgcttggccgttgggggacaa
ccaacaggcaaataccctacggtgaagtttccaaaggtggattctggctcttccaggctg
ccaataccggcctcccaagctcgaccatctgccccaaagagcttgcacaccctcgctgtg
ccacctacgccaaaggctcccaaaaggaggaaatcctcttcccaagaagtaaatgtggag
gagctgagactgtccccagtcaatgcctggccagaccagtccagtccacaggaagaaccc
agcagctcacccagacggggcagctcagccgccagccagagtagcgccatcatcaacgat
cggctgcaggagctggtgcggctcttcaaggaccgaactgagaaagtcaaggagaagctg
acggaccccgacgcctcctccgaggatgagacccctgcagcctctccttccaaagagaaa
atctcagaggagaaagacaaaaaagccgaggaagatggagaggggcgtttccacgaaatt
ctttgctgcaggtttaagtatcaccccttcctctgccacatgaggagagtccagttcccc
agcagtattgacccttcctccaatctgatgtacgtgttgtggctcttacttgtggtcctg
gcatggaactggaactgctggctgattccggtccgttgggctttcccatatcaatcacct
gagaacgtctattactggatggctattgactacctctgtgatttcatctacttcctggac
atcgccgtctttcaggtccgcctgcagtttgtccatcaaggagatattattactgataag
agagccatgaggaagaattacctgaagtcccatcgttttaagatggatgccctctgcctt
ctccccctggatttcttctacttcaaggttggcgtgcatcctctcctgcgcttgcctcgc
tgcctaaagtacctggccttctttgagtttaacaaccgcctggaagctattttgagcaag
gcctatgtttacagagtcgtaaggattacggcctacctgctcttcagcctgcacctgaac
tcctgcttgtactactgggcctcctccttccaggggatcggctccactgcctgggtctac
gacggcagaggaaacagttacatccgctgttattactgggctgtcaagacgctcatcacc
atcggggggctgccggagccccacaacctctttgagatcgtttttcagcttctcaattac
ttcacaggtgtctttgctttctcagtgatgatcggccagatgagggatgttgttggtgct
gccacagcaggacaatcgtactatcggagctgcatggataataccataaaatatatggct
ttgtacagaattccccgttcggttcagaacagaatcaaaacttggtatgaatatacttgg
cattcccaaggcatgctggacgaatccgagctgctcctgcagctgcccgaaaagatgaag
ctggacatcgccatcgacgtgaactacagcattgtgagcaaagtgccactcttccagggc
tgtgatcggcaaatgatttttgacatgctgaagaggctgcgatccgtggtgtacttacct
aacgactacgtgtgcaaaaagggagagatcggccgggagatgtacatcattcaggttgga
caagtccaagtacttgggggaccggatgggaaaactattcttgtgaccctgaaagccggc
tctgtgtttggagaaataagtttactagctgtgggaggtggaaatcgccgtaccgctaat
gttgtggcacatggatttactaaccttttcattctggataagaaggatttgaatgaaatt
ctggtgcactatccagagtcccaaaagctgctgcggaagaaagctaggcgaatgctgagg
aacaacaccaggcccaaagaagagaaggtcctcataatccctcccagggttgggaccccc
aaactcttccaagccgccctggtggctgcaggcagaatggggggcaaaggcagactggct
cacctccgctggaaactgaaggagctgaaggcaatccaggctgccacttccacaccagtt
gtctccaagtcagcagctagccatgcttcaccagctggttcccccaagcccaacaactgc
ggaacagagacgaagacctccaggagtcccgatcatcctgttcgggtttccatgagtccc
acccctgctggggatgaagaggttctcttggtggaagtcttagaaaaaggggaacctaag
tag
DBGET
integrated database retrieval system
