Thamnophis sirtalis (common garter snake): 106550113
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Entry
106550113 CDS
T06107
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106550113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106550113
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106550113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_16
TPR_19
TPR_12
TPR_1
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_10
TolB_N
Motif
Other DBs
NCBI-GeneID:
106550113
NCBI-ProteinID:
XP_013923382
UniProt:
A0A6I9YGR7
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MLLLFSQFKVLPIVEGVTDKSVFFLGVGNYALAQHAFIKSIQADQINVVAWTNLGVLYLT
SGKIEQAHEAFKVAQSLEPSHLTCWIGQAFVAETVGSYETMDLFRHTTELSMHTEGAKGY
AYWVCSTLQDKTNRNTELYKYNILQMNAIPTAQVALTKYTERIQNDACAFTMLGYLNEYL
QLKKQAADTYQRAVLLLTNSEDRERYNIVMRNYGRSLCALGRCDDAIKAYLTTHLIEFDD
IVGIALSYFKKGHFQESQKAYEKALAMAESEQDKAYILTALAIIEYKQNRVDAAKTLLFK
CSILQEPNMESLQALCSLGLIKQDATLATAALKELLKHPGKKDNVYKRCLLASAVYALQG
RHLAVQRQVSKAVHSNPDNPALWSLLSRLVPRYVPQNAKGGAVAGNIACILDLNHGKKAL
LNTAVNQLATGCHKAENKKNILKAVHLSPDDPTAWAVLLAACQAENTIAHLHNKQSKQTH
LEKMIVTAISAKTKAKELPASRAQEIEEWSFFQAITGLNEAGRTSEAEALCEKGLKKFPE
QPMWYL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgttttcacaatttaaagttttacctatcgtagagggtgttacagataaa
tctgtattttttttaggtgttggaaactatgctcttgcacaacatgcattcattaaatct
attcaagctgatcaaattaacgttgtcgcctggaccaatctgggagttttgtatttaaca
agtggaaaaatagagcaagcgcatgaagctttcaaagtagcccagtctctggaaccctcc
catctaacctgttggattggacaggcctttgttgcagaaactgttggtagctatgaaaca
atggatctcttcagacacaccactgaactcagcatgcatacggaaggtgcaaaaggctat
gcctactgggtgtgctcaaccttacaagataaaaccaacagaaatactgaactatataag
tacaacatccttcagatgaatgctattccaacagcacaagttgctttaactaagtataca
gaaagaatccagaatgatgcatgtgctttcacaatgcttggttatttgaatgaatatctt
cagctgaaaaaacaggcagcagatacatatcaaagggcagtcctattgctgacaaattct
gaagacagagaaagatacaacatagtgatgagaaattatggaagatcactctgtgctctt
gggcggtgtgatgatgccatcaaggcttatttgacaactcatctgatagaatttgatgat
attgtaggaattgctctgtcttacttcaagaaaggacatttccaggaaagtcagaaggct
tatgaaaaagctcttgcaatggcagagtctgagcaagataaagcatatatattaaccgcc
ctcgcaataatagaatacaaacagaaccgagtggatgctgcaaagaccctcttatttaaa
tgttctatattacaggagcctaacatggaaagcctgcaagccttatgcagtttagggctg
atcaagcaggatgccacacttgcaaccgcagcacttaaagaactgttaaagcacccaggg
aaaaaagacaatgtttataagaggtgccttcttgcatctgctgtctatgcattacaaggc
agacatctggctgttcaaagacaagtttctaaagctgtccacagcaaccccgataaccct
gccctctggtccctgctgtcaagactggtccctcggtacgtgccacaaaatgccaagggt
ggagctgtggcaggaaatattgcttgtattcttgatctaaatcatgggaagaaagccttg
ctgaataccgcagttaatcaactggccacaggatgtcacaaagctgaaaacaaaaagaat
attctaaaagcagttcatctttctccagatgatcctacagcttgggcagtactcttggct
gcttgccaggcagaaaacacaattgctcatctgcataataagcaatccaagcagacacat
ctggaaaaaatgattgtcactgcaatctcagctaagactaaagccaaagaacttccagct
tccagagctcaagaaatcgaagaatggtcttttttccaagctattactggcttaaatgag
gcaggtagaacttcagaagctgaggctctctgtgaaaagggcttaaaaaaatttcctgag
cagccaatgtggtaccta
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