Thamnophis sirtalis (common garter snake): 106550917
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Entry
106550917 CDS
T06107
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04517
IgSF CAM signaling
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106550917 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106550917 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106550917 (RAPGEF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
cNMP_binding
RasGEF_N
RA_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
106550917
NCBI-ProteinID:
XP_013924381
UniProt:
A0A6I9YJN5
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MASYVDNNFRQAVMKNPVDRSPQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDAYPVGKPPLPRGYHTECTKQ
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMDKEYMKGIMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTPERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKSNCVSTVTMFLSCYCSDIAIGQSQDDSIVGLRQTKHIPPALPVSGTLSSSN
PDLLQSHHRILDFNTTPDLPDQVLRVFKADQQSRYIMISKDTTAKEVVVQAIREFALTTT
PDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRYYLKNNMETETLCSDEDAQELL
RESQISLLQLSTIEVATQLSMRNFELFRNIEPTEYIDDLFKLKSKFNCANLKKFEEVINQ
ETFWVASEILRETNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRTTW
EKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDS
KVEGLVNFEKLRMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSTNTAVLDV
AQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLSNLDLEMDEESLQALSLQCEPASNT
LPKTPGDKRSGKAET
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataataacttccgccaggcggtcatgaaaaacccagtcgacagg
agcccccaggatctggagatagtatattcttatttacatggaatggaagctttgtctaat
ttaagagaacatcagctcagaatcatgtgtgaaaccgtgagatatgagcggcatgaagcc
aatgaagttttatactatcctgatgatattggaacctgttggtatattcttctgtctggt
tcagtatttatcaaagaatcaatgtttcttccaaggagcagttttgggaaacgctctgca
ggaagcttcaggcgtggctgtgaatgcattgttctagaaccatctgaaatgattgtggtg
gattacatggatgaaaatgaagaatatttccagcgacaagcttcacatagacaatcaagg
aggagatttaggaaaatcaaccaaaaaggagaaagacaaacaattattgatactgttgat
gcttatcctgtagggaagccacccttacctagaggttatcatacggaatgcactaaacag
cagctacctgcagattttacaaaactgcacctcactgacagtctccacccacaggtgacc
cacgtttcatctagtcattcaggatgtagcatcactagtgactctggcagtagcagttta
tctgatatctatcaggccacagaaagtgaagctggtgacatggacctgagtggattacca
gaaacagcagtagattctgaagatgatgacgatgaagaagatattgagagggcttctgat
cctttgatgagcagagatattgttagagactgtctagaaaaagatccaatagacaggaca
gatgatgatattgaacaactcttggaattcatgcatcaattaccagcttttgctaacatg
acaatgtcagtgagaagagaactctgtgctgtgatggtatttgcagttgtagaaagagca
ggaaccattgttctaaatgatggagaagaacttgattcctggtctgttattttgaatggt
tctgtagaagtaacatatccagatggaagaacagaaatattatgcatgggaaacagtttt
ggtgtttctcctactatggacaaagaatatatgaaaggaatcatgagaaccaaagtggat
gactgccagtttgtatgcatagcccaacaagattactgtcgcatactgaaccaagtagaa
aagaacatgcagaaggtagaagaggaaggggagattgttatggtaaaagagcatagggaa
ctggatcgcactggaacaagaaaaggtcacattgttattaagggaacaccggagagatta
acaatgcatttagttgaagaacattcagtagtggatccaacttacatagaagatttccta
ttgacatatagaaccttcctttcgagcccaatggaagtggggaaaaagttattggagtgg
tttaatgatcctagcctcagggataagagtaattgtgtaagcacagtaactatgtttctc
tcctgttactgcagtgatattgcaattggtcagtctcaggatgatagcattgtaggttta
aggcagaccaagcacattcctcctgctttacctgtcagtggaacactgtcatcaagtaat
cctgatttactgcagtcacatcatcgcatcttagatttcaacacaaccccagatttacca
gatcaggttctacgagtctttaaagcagatcagcaaagtcgctacattatgataagcaaa
gacacaactgcaaaagaagtcgtcgttcaagctattcgtgagtttgctttaaccaccacc
ccagatgcttactcgttatgtgaggtctctgtcactccagagggtgtcattaagcagcgg
agacttccagatcaactctccaaacttgctgacagaatacagcttagtggaaggtattat
ttgaaaaataacatggagacagaaactttgtgttcagatgaagatgctcaggaattgcta
agagagagccaaatttctctactgcagctcagcactatagaggtggctacccaactctca
atgcgtaattttgaactgttccgcaacattgaacctacagagtacatagacgatttattt
aaactgaaatctaaatttaactgtgctaatttaaaaaagtttgaagaagtaataaaccaa
gaaaccttttgggtagcatctgagattttgcgagaaaccaaccagttgaaaaggatgaag
ataattaagcacttcattaagatagcactgcactgcagggaatgcaagaactttaactca
atgtttgcaataataagtggtctgaatttagctccggttgcaagattacgaaccacgtgg
gaaaaacttccaagcaaatacgagaaattgtttcaagatcttcaggacttatttgatcca
tctagaaacatggcaaaataccgcaatgtcttgaatagtcagaatctacagccccccatt
attccattgttccctgtaataaaaaaggatcttacatttcttcatgaaggaaatgattcc
aaggtggaaggtttggtcaattttgagaaattaagaatgattgcaaaagagatccgccat
gtgggtcgaatggcttccgttaatatggatcctgctttaatgttcaggactcggaagaag
aaatggaggagtctggggtctcttagtcaaggcagtacaaacacagcagtacttgatgtt
gcacaaacaggtggacacaaaaaacgggtgcgtcgcagctcatttctgaatgccaaaaag
ctatatgaagatgcccagatggctcgaaaagtcaaacagtatctctctaacctagacttg
gaaatggatgaagaaagtctccaggcactgtccttgcagtgtgaaccagccagcaataca
ctacccaaaactccaggggacaaacgatctggaaaagctgaaacg
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