Thamnophis sirtalis (common garter snake): 106552079
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Entry
106552079 CDS
T06107
Symbol
ITGAV
Name
(RefSeq) integrin alpha-V
KO
K06487
integrin alpha V
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
tsr04148
Efferocytosis
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04514
Cell adhesion molecules
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106552079 (ITGAV)
04514 Cell adhesion molecules
106552079 (ITGAV)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106552079 (ITGAV)
04148 Efferocytosis
106552079 (ITGAV)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106552079 (ITGAV)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106552079 (ITGAV)
04810 Regulation of actin cytoskeleton
106552079 (ITGAV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106552079 (ITGAV)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106552079 (ITGAV)
04515 Cell adhesion molecules [BR:
tsr04515
]
106552079 (ITGAV)
04090 CD molecules [BR:
tsr04090
]
106552079 (ITGAV)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106552079 (ITGAV)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106552079 (ITGAV)
Exosomal proteins of epithelial cells
106552079 (ITGAV)
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin alpha subunits
106552079 (ITGAV)
CD molecules [BR:
tsr04090
]
Proteins
106552079 (ITGAV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
TerY_C
LYRIC
Motif
Other DBs
NCBI-GeneID:
106552079
NCBI-ProteinID:
XP_013925745
UniProt:
A0A6I9YPY6
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MSVIGQIYKDKGNREFAVDDLLEFKSHQWFGASVRSKENKILACAPLYHWRTEQKAQREP
VGTCYLFDGSKAVEYAPCRSTSTDAEGQGFCQGGFSIDFTEKDRVLLGGPGSFYWQGQLI
SDQVAEIVSKYSAKVYTTKYDNQLATRSASASFDDSYLGYSVAVGDFNGDGIEDFVSGVP
RAAKTLGMVSIYNGETMASMYNFTGEQIAAYFGYSVAATDINGDHYTDLLVGAPLFMDRG
SDGKLLEVGQVSLYLQQASGGFQTTAMKLNGFEVFARFSSSVAPLGDLDQDGFNDIAIAA
PYGGENKKGLVYIYNGRATGLNGMPSQVLEGQWASEAMPPSFGYALKGAIDVDKNGYPDL
IVGAFGVDRVALYRARPVITVNAGLEVTPTILNPENKICEDNGQKVSCFRVKFCLKADGK
GNLPPELTFHVELLLDKLKQKGTIRRALFLHNRQSGHSKNMTVSKGGRKSCEELDAFLRD
ETEFRDKLTPITIFMEYQLDYKTALDSTGLQPILNQFTPANISRQAHILLDCGEDNICRP
DLKVTVDSDQKQIYIGDDNPLTLIVNTQNLGEGAYEAELFVTIPPQADFIGIVRNNEAFA
RLSCAFKTENQTRLVVCDLGNPMKAGTKLSAGLHFSVHQQSEMDTSVKFDLQIRSSNLFN
NLSPVSSYQVDLAISAAVEIRGVSSPDHIFLPIPNWQPKENPETEDDIGPLVQHIYELRN
NGPSTFSKLMLNLQWPYKYNNNTLLYIIKYEIEGPMNCTSDMEINPLKIKVSTSQQDERN
ETLSGEDTRNHQIHRRDLGVPEEDVQTLGCGNADCLKIFCQVGRLERGKTAILYLKSRLW
AQTFMTKENQNHSYSLKSSASFNVIEFPYKNLSFPEDVQNSTIVTTNILWGIQPAPMTVQ
VWVIILAVLAGLLLLALLVFIMHKVGFFKRVRPPQEEQEREQLQPHENGEGTTEA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaattggccagatctataaggacaaaggcaacagagaatttgctgtagatgat
cttttggaattcaaatcacatcaatggtttggagcatctgtgagatctaaagaaaataaa
attttggcatgtgctcctttatatcactggagaactgaacagaaagcacagagggaacct
gtgggaacttgttatctttttgatgggtctaaagctgttgaatatgctccttgcaggtca
acaagtactgacgctgaaggacagggcttttgtcaaggtggattcagcattgattttact
gagaaagacagagttctacttggaggacctggaagcttttattggcaaggccagctaatc
tctgatcaagtggctgagattgtgtcaaaatacagcgctaaagtctacaccaccaaatac
gataaccaattagcaacgcggtccgctagtgctagtttcgatgacagttatttgggttat
tcagttgctgtaggggatttcaatggtgatggcatagaagattttgtgtcaggtgtccca
agagcagcaaaaactttgggcatggtatccatttacaatggggaaaccatggcatccatg
tataacttcactggagaacagatagctgcttattttggatattctgtagctgccacggat
atcaatggagatcactatacagatttgcttgtaggtgccccactctttatggatcgtggt
tcagatggcaagcttctggaagtgggccaggtgtctctttaccttcaacaagcctccgga
gggtttcaaactacagccatgaagttaaatggctttgaagtctttgcaagattcagcagt
tcagttgcccctctgggagaccttgatcaggatggcttcaatgacatagcaattgcagca
ccttatggtggagaaaacaagaaaggactggtttatatatacaatgggagagccacagga
ttgaatggaatgccatcgcaggtccttgaaggacaatgggcctctgaagcaatgccacca
agttttggatatgccctgaaaggagctattgatgtggacaaaaatggctacccagacttg
attgtaggagcttttggtgttgaccgagttgctttatacagggcccggccagtcattact
gtgaatgctggattagaagttacaccaacaattttaaatccagagaacaaaatctgtgaa
gacaatggtcaaaaggtttcttgttttagagtaaagttctgcttaaaagctgatggcaaa
gggaatctccccccggaactcactttccacgtggagctcctgttggacaaacttaaacaa
aaaggtaccataaggcgagctctgtttctccacaacagacaatcgggccactcaaagaac
atgacagtctccaaaggaggtcgaaagagttgtgaagaacttgatgcttttttaagggat
gaaactgaatttcgagataagcttactccaattactatcttcatggaatatcagctggat
tacaaaactgctttggattctactggtttacagcccatcctcaaccagtttactcctgca
aatatcagcagacaggctcatattcttttggattgtggggaagataatatctgccgtcca
gatttaaaagtaactgttgacagtgaccagaagcaaatctacattggggacgacaatcca
ttaaccctgattgtcaacacccagaacttaggtgagggagcctatgaagctgaactcttt
gtaaccatcccaccacaagcagacttcattggtatagttcgcaacaatgaggctttcgca
agactttcatgtgcatttaagactgagaatcaaactcgattggttgtctgtgatcttgga
aatcctatgaaagcaggaacaaagctctcagctggtcttcattttagtgttcatcaacaa
tctgagatggatacttctgtcaagtttgatctacagatccgtagctccaatttgtttaac
aacctaagcccagtgagctcataccaggtggacctggccatttcagctgctgtagaaatc
agaggggtctcttctcctgatcatattttcctcccaattcctaactggcaaccaaaagaa
aatccagaaacagaggatgacatagggcctttagttcaacacatctatgagctcagaaac
aatggtccaagtaccttcagcaagctgatgctcaaccttcagtggccatataaatacaac
aataatacccttttatatatcatcaaatatgaaattgaaggacccatgaactgtacatct
gatatggagattaacccactaaaaattaaggtatcaacttctcagcaagatgaaaggaac
gaaacgcttagtggggaagatacccgcaatcatcaaatccaccggagagatctaggtgtt
ccagaggaagatgtacaaactttgggttgtggaaacgcagattgtttaaaaatattttgc
caagttggtcgcctagagaggggaaaaactgcaattctctatttgaaatctcgcctttgg
gctcaaaccttcatgactaaagagaaccaaaaccactcctattctctcaagtcatcggcg
tctttcaatgtcatagagtttccatacaagaacctttcttttcctgaagatgtccagaat
tctacaatagttaccacaaacatcttgtggggtattcagccagcaccaatgacagtacaa
gtatgggtaatcatactggctgtcttagcaggattattactgttagcccttcttgttttt
ataatgcacaaggtgggtttcttcaaacgtgtacggccacctcaggaagaacaagaaaga
gagcaattgcaacctcatgaaaatggagaagggaccacagaagcttaa
DBGET
integrated database retrieval system
