Thamnophis sirtalis (common garter snake): 106552203
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Entry
106552203 CDS
T06107
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106552203 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106552203 (LRFN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
106552203
NCBI-ProteinID:
XP_013925892
UniProt:
A0A6I9YNP1
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MEKLLLYLFFIGLVLKAETCPKRCVCQIWSPNLATLCAKKGLLFVPPDIDRKTVELRLAD
NFVTSIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITHDMLS
GLSNLHHLILNNNQLTMISSTAFDDVLALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIINIPKGTFSHLHKMTRLDVTSNKLHKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPSVLSGRYFWSVPEEEFLCEPPLITRHTHELRVLE
GQRAILRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDIHITTMKDTGSFTCIAS
NPAGEDTQSVDLHIIKLPHIVNSTNHIHEPDPGSSDISTSTKSGSNASSSNGETKVSQDK
KVVIAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPMSKTFLVNNLAAG
TMYDLCVLAIYDDGITSLTATRVVGCTQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNNGGHPKVTKVSNVYSQTNGAQAQGCSGAVMSQSGSKQAVGREE
SLQCCKVSNDNVAQSSEACCSQDSSTATSSLPPMWTPGPPTSQKLKRKPMPKPSSDPPPP
SEGAATSLESQNTNRNNSTALQLSSQTPDYAKGGSQYKRAQAKSSKFLTLPADPSRAKRR
YSLNGELMEYHCYINSSNAGGFWSKRSLSMNGMLTQTDCSNVDSGKATFSSSEWILESTV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttctatatctgttcttcattggcttagtgctgaaggctgagacttgt
cccaagcgctgcgtatgccagatctggtctcccaatcttgctacactttgtgcaaagaaa
gggctattgtttgtccctcctgacattgataggaagacagtagaattgcggctggcagac
aactttgttacaagcatcaagcggaaagattttgccaatatgaccagcctggtggacctg
acgctgtctaggaatacaattagtttcatcacccctcatgcatttgctgacctgcgcaac
ctgagggctttgcacttgaacagtaaccgattgactaaaatcacccatgatatgttaagt
gggctttccaatctgcatcatttgatattgaacaataaccagctgaccatgatctcctcc
accgcttttgacgatgtcttggctcttgaggagctggatttgtcctacaacaacctggag
accattccctgggatgctgtcgagaagatggtcagcttgcacaccctcagtttggaccac
aacatgatcatcaacattcccaaggggaccttctcccacctccacaagatgacccggctg
gacgtcacgtccaacaaactgcataagctgccgcctgaccctctcttccagcgagctcag
gttttagccacctcaggaatcatcagcccatccacatttgcactgagctttggagggaac
cctcttcattgcaattgtgaacttttgtggctgagacgcctttccagggaggatgacctg
gagacttgtgcttcaccttctgttctgtctggtcgctatttctggtcggtccccgaggag
gagttcctgtgcgaaccccccctcattactaggcacacacatgagctcagagtgcttgag
ggccaaagagccatcctgagatgtaaagcccgtggtgacccagagcctgctatacattgg
atttccccagaaggcaagctgatttctaatgcaacccggtctctggtgtatgacaacgga
actcttgacattcatattacaaccatgaaggatacaggctctttcacctgtattgcttcc
aacccagcgggggaagacacccagtctgtagatcttcacataatcaaactgcctcacata
gtaaacagcacaaaccacatccatgagccagatcctggctcctcggatatatcaacttcg
accaaatctggctcaaatgcaagcagtagcaacggggaaacgaaagttagccaggacaag
aaggtggtgatagcagaagccacatcatccactgccctgcttaaatttaatttccaaagg
aatatacccgggatacgtatgttccaaattcagtataatggaacatatgatgattcgctt
gtttacagaatgatacctcccatgagcaagaccttcctggtcaacaacttggctgcgggg
acgatgtacgacttgtgtgtcttagcaatctatgacgatggcatcacctccttgacagct
actcgcgtggtgggatgcacccagttcacgacggagcaggactacgtgcgctgccatttc
atgcagtcccagttcctgggcgggaccatgatcatcatcatcggagggattatcgtggcc
tccgtcctggtcttcatcatcatcctcatgattcgctataaggtgtgtaacaacggcggg
caccccaaggtgaccaaggtcagcaacgtttactcccagaccaacggggctcaggcccag
gggtgcagtggagccgtcatgtcccagtctgggtccaagcaggccgtggggcgtgaggag
agcctgcagtgctgcaaagtcagcaacgacaatgtggcgcagtcgtcggaagcctgctgc
agccaggactcctccactgctacctcctctttgcctcccatgtggactcctggccctccc
acttcccaaaagctgaagcgtaagcccatgccaaagcccagcagtgatcctccaccgccg
agcgaaggcgccgctaccagcctagaatcccagaacactaaccgcaacaactcaactgct
ctgcagttgtctagccaaaccccagactatgccaaagggggatcccagtacaaaagagca
caagccaagtcaagtaagttcctcactttgccagctgacccatccagggcaaaacgcagg
tactccctgaacggagaattaatggaataccattgttatattaactcctccaatgcaggc
ggattttggtctaagcggagcttgtctatgaatgggatgctcacgcagacagactgttcc
aatgtggatagtggcaaagcaactttctcaagctctgagtggatattggaaagcactgtg
tga
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