Thamnophis sirtalis (common garter snake): 106554889
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Entry
106554889 CDS
T06107
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03420
Nucleotide excision repair
tsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106554889 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
106554889 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsr03051
]
106554889 (RAD23B)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106554889 (RAD23B)
Proteasome [BR:
tsr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106554889 (RAD23B)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106554889 (RAD23B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
UBA_2
DUF1421
Motif
Other DBs
NCBI-GeneID:
106554889
NCBI-ProteinID:
XP_013929105
UniProt:
A0A6I9YZR8
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDCDETVKALKEKIELEKGKDAFPVAGQKLIYAGKILNDDTALN
EYKIDEKNFVVVMVTKPKAAAAPSPSPSPTTTTTQQSNETTTTVTSTTPAALPKLVPTPT
PAPAQVSVPAPTASTPAAAACESAPVSATVEEKSSDKPVETPPATSPTSTESTIGDTSRS
NLFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRE
SQGMADPPQAASTGASPSSAVAAAAAATTTTTTTTTSSTGGHPLEFLRNQPQFQQMRQII
QQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQESGQGGGGGSGSGGGVAEA
GSRHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcactctgaagaccctgcagcagcaaaccttcaagatagacatcgactgcgac
gagacggtgaaagcattgaaagagaagattgaattagaaaagggaaaagatgcttttcca
gtagccggccaaaaattaatatatgcaggtaaaatacttaatgatgatactgctcttaat
gaatacaaaattgatgaaaagaattttgtggtggttatggtaacaaaacccaaagcagca
gccgctccatctccatccccatctccaactacaactacaacacagcagtcaaatgaaact
accactacggttacttctacaacacctgctgctctgccgaaactagtccctactcctact
cctgctcctgcacaagtttcagtacctgcacccactgcttcaacaccagctgcagcagcg
tgtgagtctgcacctgtaagtgccactgtagaagaaaaatcatcagataaaccagtagaa
acgccaccagccaccagcccaacatctacagaaagtacaataggagacacttctcgatca
aatctctttgaggatgctacaagtgcacttgtgacaggccagtcgtatgaaaacatggtg
actgagattatgtcaatggggtatgaaagagagcaggtaattgctgcattgagagccagc
ttcaataatcctgacagagcagtggagtatcttttaatgggtattcctggagatagggag
agtcaaggtatggctgatcctcctcaagcagccagcactggagcttctccatcttcagca
gtagctgctgccgctgcagcaactaccactaccactactactaccactagctctacagga
ggacatcctcttgaatttttacgaaaccaacctcagttccagcagatgagacaaattatt
cagcagaatccatcgcttttgcctgcattattacaacaaataggacgggaaaatcctcag
ttattgcagcaaataagccaacatcaagagcattttattcagatgttaaatgaacctgtt
caagagtcaggacaaggaggtggtggaggtagtggaagtggaggcggagtagctgaagct
ggaagccgtcacatgaactatattcaagtaacacctcaggaaaaagaagctatagaaagg
ttaaaggccctaggatttcctgaaggacttgtgatacaagcatattttgcatgtgagaag
aatgaaaatttggcagccaatttccttctacagcagaactttgatgaagattga
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integrated database retrieval system
