Telopea speciosissima (New South Wales waratah): 122658502
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Entry
122658502 CDS
T07910
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like isoform X1
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00900
Terpenoid backbone biosynthesis
tss01100
Metabolic pathways
tss01110
Biosynthesis of secondary metabolites
Module
tss_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122658502
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tss01006
]
122658502
Enzymes [BR:
tss01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122658502
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122658502
2.5.1.29 geranylgeranyl diphosphate synthase
122658502
Prenyltransferases [BR:
tss01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122658502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
PA28_alpha
Motif
Other DBs
NCBI-GeneID:
122658502
NCBI-ProteinID:
XP_043709428
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All DBs
Position
4:complement(15393678..15408811)
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AA seq
373 aa
AA seq
DB search
MSSANFGSLVQICSIYTHESISKFPICSTVNPLRKMPMFLSSPRTRRPFSFSSTSISAVH
IGKEEERLKEGESPEMETGFDFNAYMLQKGASVNQALEGAVSLKDPLKLHEAMRYSLLAG
GKRVRPILCIAACELVGGNEGTAMPAACAVEMVHTMSLIHDDIPCMDNDDLRRGKPTNHK
VFGEGVAVLAGDALLAFAFEHIATAKVGVPPANIVRVVEELAKVIGSEGLVAGQVVDIDL
AGSSDVGLEQLEFIHIHKTAALLEGSVVIGAILGGGSDEQVERLRKFARSIGLLFQVVDD
ILDVTKSSNELGKTAGKDLLADKLTYPKLLGLEKSQEFAEKLNKEAKELLSGFDPQKAAP
LIALANYIAYRQN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcaaactttggttcattggttcaaatctgctcgatatatacccatgagagc
atttccaaattcccaatttgctcgacggttaaccccctgcggaagatgcccatgtttctc
tcatctcccaggacacgacgacccttttctttttcttccacctctatctctgcagttcat
atcggcaaggaagaggagaggcttaaagaaggtgaaagccccgagatggagacaggcttc
gatttcaatgcctatatgcttcagaagggagcttcagttaatcaagccctcgaaggtgct
gtctccctcaaggacccccttaagctccatgaagctatgcgctactcccttctcgccggc
ggcaagcgtgtgcgtccaatcctttgcattgctgcctgcgagctcgtcggaggaaacgaa
ggcacggccatgccggctgcatgtgcggtggagatggtccacaccatgtccttgattcat
gatgatatcccctgtatggacaacgatgatctccgacggggtaagcccaccaatcacaaa
gtcttcggcgaaggtgtggcggtcctagccggagacgctctgcttgccttcgcattcgag
cacatcgctacggcaaaagttggggtgccgccggcaaatatcgtccgtgtcgtcgaagaa
ttagcgaaggtgattgggtcggagggcctggttgcaggtcaagtggtggatattgattta
gctgggtcgtccgatgtgggtttagagcagcttgagttcattcacattcacaagactgcc
gctttgctcgaaggatctgtggttattggagcaatccttggtggcggatctgatgaacaa
gtggagaggctaaggaagtttgccaggtctatcggattgctctttcaggtggtggatgac
atccttgacgtcactaaatcatctaatgagttggggaagacggccggcaaggatttgttg
gctgacaagctcacatatcccaagcttctgggcctggagaaatcgcaggaatttgctgag
aagctgaacaaggaggccaaggaacttctctctggattcgatccacagaaagctgctcca
ctgattgctttagcgaactacattgcttaccgacaaaactag
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