Trachemys scripta elegans (red-eared slider): 117867453
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Entry
117867453 CDS
T07347
Symbol
SEPTIN4
Name
(RefSeq) septin-4 isoform X1
KO
K16943
septin 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117867453 (SEPTIN4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117867453 (SEPTIN4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117867453 (SEPTIN4)
04812 Cytoskeleton proteins [BR:
tst04812
]
117867453 (SEPTIN4)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
117867453 (SEPTIN4)
Cilium and associated proteins [BR:
tst03037
]
Motile cilia and associated proteins
Sperm associated proteins
117867453 (SEPTIN4)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
117867453 (SEPTIN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
ABC_tran
AAA_16
Roc
nSTAND1
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
117867453
NCBI-ProteinID:
XP_034608387
LinkDB
All DBs
Position
18:21873260..21965150
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AA seq
513 aa
AA seq
DB search
MAAECEGGPAAPGDPEETQPCAVEQAVPGEGASPCLPEHAEEPAETQAIKRFLKEDSEEA
ELAQFLKEFASGESFRKVELEEGKRAHGQGPVDPGVFSSVAQPIADELLDEKELRPFSRP
RPLDFQQHIAAPAPLSPSRPRSPWGKLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDF
TLMVAGESGLGKSTLVNSLFLTDMYRDRKFLSAEERITQTVEITKHVVDIEEKGVKLRLT
IVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGH
GLRPLDVEFMRALHQRVNIVPILAKADTLTPSEVERKKSKIREEIEHYGIRIYQFPECDS
DEDEDFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPAHCDFVKLRT
MLVKTHMQDLKDVTRETHYENYRAQCIQSMTRMVVKERNRNKLTRESGTDFPIPAIPAVP
DSETEKLIREKDEELRRMQEMLQKIQRQMKDSH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagtgtgaggggggcccagctgctcctggagaccccgaagagacccagccc
tgcgcagtggagcaggccgtccctggggaaggggccagcccctgcctcccagagcatgct
gaggagccggctgagacacaagcaataaagcgcttcctgaaagaagactcggaggaggca
gagctggcccagttcctgaaggagttcgcttcaggcgagagctttaggaaagtggagctg
gaggagggcaagagggcccatggccaggggcccgtagatcccggcgtgttctccagcgta
gcccagcccattgccgatgagctgctagacgagaaggaactgaggcccttctcccggcct
cggcccctggactttcagcagcacatcgcagctccggcaccactgagcccctcgcggcct
aggagcccatggggcaagcttgatccatacgactcttctgaggatgataaggagtacgtg
gggtttgcgacgctccccaatcaggtccatcggaaatcggtgaagaaggggtttgacttc
acgctgatggtggcaggagagtctggcctggggaaatccaccctggtgaacagcctcttc
ctcactgacatgtacagggatcgcaaattcctcagtgcagaagagcgcattactcagacg
gtggagatcaccaaacacgtggtggacattgaggagaagggggtcaaactgcgcctgacc
atcgtggacaccccaggattcggcgacgctgtgaacaacacggaatgctggaaacctgtg
gctgattacatagatcagcaatttgagcaatatttccgggatgagagcggcctgaaccgg
aagaacatccaggacaaccgcgtgcactgctgcctctacttcatctcaccctttggacat
ggccttcgtcccctggatgtggaattcatgagagctctccatcagcgggtgaacattgtg
cccatcctggcaaaagctgacaccctgacgccctcagaggtggagcgcaagaaaagcaag
attcgagaagaaatcgaacattacgggatccggatctaccagttccctgagtgcgactct
gatgaagatgaggatttcaagctgcaggaccaggcattgaaggagagcatccctttcgct
gtgatcggcagcaacacggttgtggaggccaaaggaaggcgagtccgtgggcgactgtat
ccctggggcatcgtggaagtggagaaccctgcgcactgcgactttgtgaagctgcgcacc
atgctggtgaagacccacatgcaggacctcaaggatgtgacacgagagacccactacgag
aactaccgggcgcagtgcatccaaagcatgacccgcatggtggtgaaggagaggaaccgc
aacaaactgacgcgggaaagcgggacagatttccccatcccagctatcccagcagtgccg
gactctgaaacagagaaactcattcgggagaaggacgaagagttgcggaggatgcaggag
atgctgcagaagatccagaggcagatgaaggactcccactag
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integrated database retrieval system
