Trachemys scripta elegans (red-eared slider): 117868966
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Entry
117868966 CDS
T07347
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117868966 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
117868966 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117868966 (LSM4)
03041 Spliceosome [BR:
tst03041
]
117868966 (LSM4)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117868966 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
117868966 (LSM4)
Spliceosome [BR:
tst03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117868966 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117868966
NCBI-ProteinID:
XP_034611285
LinkDB
All DBs
Position
22:complement(1484985..1495590)
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGGGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttatccctgttgaagactgcacagaaccaccctatgttggtggaattgaaa
aatggtgaaacgtacaacggtcacctagtgagttgcgataactggatgaacatcaacctt
agagaagtcatctgcacatcaagggatggagacaaattctggagaatgccagagtgttac
attcgcggcagcacaattaaatatttgcgtatccccgatgaaatcattgacatggtgaag
gaggaggtggtgtcaaagggcagaggtcgtggtggcatgcagcagcagaaacaacagaaa
ggccgaggaggtggaggtgccgggcgaggagtgtttggtggtcgtggccgagggatacca
gggagtggaagagggcagcaggaaaagaagccaggcagacaatctgcaaaacaatga
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integrated database retrieval system
