Trachemys scripta elegans (red-eared slider): 117871214
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Entry
117871214 CDS
T07347
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117871214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117871214
Transporters [BR:
tst02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117871214
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GFIT
Motif
Pfam:
SSF
DUF6704
Motif
Other DBs
NCBI-GeneID:
117871214
NCBI-ProteinID:
XP_034614841
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Position
1:319291207..319330487
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AA seq
548 aa
AA seq
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MALNIPGLVATIVFYAIMLATGIWAAWKTKKEEKNANRSEVAMVGGRNMNIFVGLFTTTA
TWVGGGYINGTSEIVYLPTRGLAWVLAPVGYVLAFIIGGLFFVKPMRSKSYVTMMDPLQE
TYGNTMGTLLFLPTLIGDVFWFAAILSALGATMSVILDIRGYLAIIISACTVILYTLLGG
LYSVAYTDVIQLVFMMVSLWTCVPFALLNSATENIYYTAVNEFYQVPWIGKLETEYLGRW
LDELLYVALGSIPWQIYFQRVLAASSSRQARLTSYFAGFGCVFMVIPSVLIGAVAASTDW
NQTSYGLPTPNERGESSMILPIVLQYLCPTYVSVAGLGAIAAAVMSSADSALLSASSILA
HNIYRKILRKKATEKEVVCIMRVSMVVFGAAAAGLAFLSNSVYDLWFLSGELVYALLFPQ
LCCVLFIPNTNTYGSAAGFFFGFLLRLLAGEPSLKIPPVIHYPGCSLVDGVYVQLFPFKT
FTMLLTLGTIVAVSYLAAFLFKRNILPHGWDVCSVIKESEASVPLPELDEQAGLQINIVY
INPIEIHT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctctaaacatccccggtctggtagccacgattgtgttctatgcgataatgttggca
actgggatttgggctgcttggaaaaccaaaaaggaggagaagaatgcaaaccgaagtgag
gttgccatggtgggaggcagaaacatgaacatttttgtgggattattcaccacaactgca
acttgggttggaggtggctacatcaatggaacgtctgagatcgtgtacctccctacacga
gggctggcctgggtcctggctccagtaggatatgttctagcttttatcattgggggcctc
ttttttgtaaagccaatgcggtccaaaagctatgtgacaatgatggaccccctccaagaa
acctatgggaacactatgggaacccttctctttcttccaacattgataggagatgtattt
tggtttgcagctattctttctgctttaggggctacaatgagtgtgatcttggatatcaga
ggatatttagctatcatcatttcagcatgtactgttatactctacactttactgggagga
ctatactcagttgcatacactgatgtgatacagctggtttttatgatggtcagcctgtgg
acttgtgtgccatttgcactgctgaactctgcaactgaaaacatttattatactgctgtt
aatgaattctatcaagtaccatggattggcaaactggaaacagagtatcttggaagatgg
ctagatgaacttctgtatgtggctcttggaagtattccatggcagatctatttccaaaga
gtcctcgcagcctcctcatccagacaagcaaggctcacttcttattttgcagggtttggg
tgtgttttcatggtcattccatctgttcttattggcgcagtagctgcttctacagactgg
aatcagacaagctatggtctgccaacccctaatgaaagaggggagtccagcatgatatta
cccattgttctgcagtatctttgcccaacgtatgtttccgttgctggcttaggagctatc
gctgctgccgtcatgtcttctgcagattcagcccttctatcagccagctccatactagct
cacaacatctacaggaaaattcttaggaaaaaggctacggagaaagaagttgtctgtata
atgagggtctccatggtggtttttggggcagccgctgcaggcctggctttcctatctaac
tctgtttatgatctgtggttcctgagtggcgagctggtgtacgcccttctctttccccag
ctctgctgcgtcctcttcatccccaacaccaacacatatggctcagctgctggattcttc
ttcgggttcctgttaaggctgctggcaggggagccttccctgaaaatcccccctgtaatc
cactacccaggctgctcccttgtggacggggtctacgttcagctgttcccttttaaaacc
ttcaccatgcttctcactctggggactatcgtcgctgtttcctacctggcggcgtttttg
tttaagagaaacatcctccctcatgggtgggatgtttgcagcgtaataaaagaaagtgag
gcttctgttccactccctgagctagacgaacaagcgggcttacaaataaatatagtttat
attaatcctattgaaatacatacttaa
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