Trachemys scripta elegans (red-eared slider): 117871510
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Entry
117871510 CDS
T07347
Symbol
PTCHD3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117871510 (PTCHD3)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Other domain-containing proteins
Patched domain-containing proteins
117871510 (PTCHD3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
117871510
NCBI-ProteinID:
XP_034615239
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All DBs
Position
2:8155870..8168693
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AA seq
993 aa
AA seq
DB search
MGHEEPGAKAGTQQQRRGCGHMGSELDPEPGPGPKPTIPPHDNFALFLSRRFGRLGELIG
AHPWPFLLLPLLLSGGLGAGFLFLPQRQANDIEGQFTPLGGPAKSERRFAQEHFPTRDSE
RFSGQRLLTEGAFASLIAVSASGNNILTAGAFGELLRLDGAVQSLAVPGGDPGTQLSYPD
LCVRSNGSCGSPNPLLAAVQGEPARLETLLPQLTYPVFGSSVFMGTFLGGVQLAGGAGAS
RVQAAKALRLVYYLREDEAADRERSLQWLENFLKRIPAELEALNLTSVQVAYFTSISRQE
EFEGNIRKVIPLFSITYFLTITFAITSCLRVDCVRNKVWVAAFGVLSSGLAVLSSFGLLL
FCGVPFVVTVANAPFLILGVGVDDMFIMISSWQQTNPKNKVEKRMAETYAEAAVSITITT
LTDVLAFYIGIMTSFQSVKSFCLYTGTAFIFCYIYNITFFGAVLALNGKREEGNRHWLIF
TKVKDIVQPHRSYLYNMCCVGGFSDKSSGGEDEHPMNKFFRKYYGPFLTKIWTKVFVVLL
YGGFLASSIYGCTQIKEGIDLRNLASDDSYVVQYYDWEDEYFSEYGPRIMVTITENVPYW
NLSIRNDIENCMESLENNSYVDKRLSESWLRIYENVTRSRSLNIDTKAFFMGNLSELFKL
FPEFEWDIDIRYKEIAASRFFIQTVNVTTAVDEKNLLHQLRDLAKDCKIPLMVYHPAFIY
YDQYIVIVPNTIQNVGIASGVMLCVSLLLIPNLLCSLWVTFAIASVIVGVAGFMTYWDVN
LDSISMINLVICIGFSVDFSAHISYAFVSSEKSTVNEKAVDALYLLGYPVIQGAISTILG
VIVLSAAQAYIFRTFFKIMFLVILFGAVHGLVFIPVFLTFFGICGRSANKRVNIKTMGEN
SNSFSNSQNPNNVGCYENQIYSNGDNFLEDNIIRQPNDIGMEKPNSGYLRSNFFPVSQNH
DSSSCLYQNNAVMVYKKQIKQLHDEGKINPDCP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggggcatgaagagccgggcgcgaaggccgggacccagcagcagaggcggggctgtggg
cacatgggctctgagttggacccagaaccaggtcccggccccaaaccgaccatccccccg
cacgacaactttgccctgtttctcagccggcgattcggccggctcggggagctgataggc
gcccacccgtggcccttcctgctgctcccgctgctgctctcgggcggcctcggcgcgggc
ttcctcttcttgccgcagagacaagccaatgacatcgaggggcagttcacgccgctcggg
gggcccgccaagagcgagaggcgctttgcccaggagcatttcccgacccgcgactccgag
cgcttctccggccagaggctgctcacagagggcgccttcgcctccctcatcgcggtctcc
gcctcgggcaacaacatcctgacggcgggagccttcggggagctcctgcggctggacggg
gcggtgcagagcctcgctgttcccgggggggacccgggcacccaactctcctacccggac
ctgtgcgtccggagcaacgggtcctgcggcagccccaacccgctcctggctgcagtgcag
ggggagccggcccggctagagaccctcctcccgcagctcacgtaccccgtgttcgggagc
agcgttttcatgggcaccttcttaggaggcgttcagctggctggcggagcgggcgcctcc
cgggtgcaggcagccaaagccctgaggctggtttattacctgagagaagacgaagccgcg
gaccgagagaggagtttgcagtggctggaaaacttcctcaagcgcatcccggctgagctg
gaggctttaaatctcacttctgtccaggtggcttactttacctcaatatccagacaggaa
gagtttgaaggaaatatcaggaaagtgatccccctgttttccataacatactttctaact
ataacctttgccattacttcttgtttaagggttgactgtgtacgaaataaagtgtgggtt
gcagcatttggagtgctgtcttctgggttagctgtgctaagcagctttggactgttgctg
ttctgtggggtaccatttgtcgtgactgtggcaaatgcaccatttcttatattgggggtt
ggtgttgatgacatgttcattatgatctcctcctggcaacagactaatcctaaaaataag
gttgaaaagcggatggctgaaacttatgcagaggcagcagtgtctatcacaatcaccact
ctcactgatgttttagccttctacatagggatcatgacttcctttcagtctgtgaagtcc
ttttgtctctacacaggaactgctttcatcttctgctatatatacaacatcacattcttt
ggagctgttcttgctttaaatggtaaaagggaagaaggcaacagacactggttaattttc
acaaaagtgaaggacattgttcagcctcatcgctcctacttgtacaacatgtgctgtgta
ggaggcttttctgataaatcttctgggggagaagatgaacatccaatgaacaaattcttt
aggaaatattatggtcctttccttacaaagatctggaccaaagtgtttgtggtgttgctg
tatggagggttcctagctagtagtatttatgggtgtactcagataaaggaaggtatagac
ctgcgaaatctggctagtgacgattcttatgttgttcagtattatgattgggaagatgaa
tatttctcagagtacggtcctaggattatggtcactatcacagaaaatgtaccttattgg
aatctatccattcgtaatgacattgagaactgtatggagtctttagaaaataactcctac
gtggacaagagactctcagagtcatggctacgaatatatgaaaatgttactagaagccgt
tcactgaatatagatactaaggcttttttcatgggtaatttatctgaactatttaaatta
tttccagagtttgaatgggacattgatattcgctataaggaaatagcagcctcacgtttt
ttcattcaaacagtgaacgttactactgcagttgatgagaaaaaccttttacaccaatta
agagacctggccaaggactgtaagatcccattaatggtatatcacccagcatttatatac
tatgatcagtatattgtaatagtgccaaacaccattcagaatgttggaattgcttctgga
gttatgttgtgtgtttccttgctgcttattcccaatctgctctgctccttgtgggtaact
tttgctattgcttctgttattgttggcgttgctggtttcatgacatactgggatgttaat
cttgattccatatctatgattaaccttgtcatttgcatcgggttttcagtagatttttct
gctcatatatcttatgcatttgtttcaagtgaaaagtcaactgtgaatgagaaggcagtt
gatgcactgtatcttcttggctacccggtgatacaaggtgctatctccactatattagga
gtaattgtgctgtctgcagcacaagcttacatcttcagaacattttttaagattatgttt
ctcgttatcttgtttggagctgttcatggtcttgtttttattccggtatttttaacattt
tttggaatttgtggcagatcagcaaacaaaagagtaaatataaaaacaatgggagaaaac
agcaactcttttagtaacagccaaaatccaaataatgttgggtgttatgaaaaccagatt
tatagtaatggagacaattttctagaagacaatattattagacaaccaaatgatatagga
atggaaaagccaaacagtggctacctccgctccaatttctttccagtttcacaaaatcat
gacagcagttcctgcctctatcagaataatgcagtaatggtgtacaaaaaacaaatcaaa
cagcttcatgatgaaggtaaaataaatccagattgcccataa
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