Trachemys scripta elegans (red-eared slider): 117873429
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Entry
117873429 CDS
T07347
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117873429 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117873429 (SS18)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117873429 (SS18)
GBAF(ncBAF) complex
117873429 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
117873429
NCBI-ProteinID:
XP_034618688
LinkDB
All DBs
Position
2:complement(205497547..205553100)
Genome browser
AA seq
419 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSQSGPPPPPRSHNMSSDGMVGGGPPAPHMQ
SQMNGQMPGPNHMPMQGPGPNQLSMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
LSQGQPMGNYGPRPNINMQPNQGPMMHQQPPPSQQYNMPQGGGQHYQGQQPPMGMMGQVN
QGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYG
YQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPQQQGYPPQQQQYTGQQGYP
GQQQGYGPSQSGPGPQYPNYPQGQGQQYAAYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattcgcggcaccgaggcagcgggggaagggcgagatcacgccggccgcc
atccagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaac
aaaggaaagacctcagaatgctctcagtatcagcagatgttgcatacaaacttggtctac
ctagccactatagcagactccaatcaaaacatgcagtctctactaccagcaccacccaca
cagaatatgcctatgggtccaggagggatgagtcagagtggccctcccccacctccacgt
tctcacaacatgtcttcagatggtatggtaggtgggggccctcctgcaccacacatgcag
agccagatgaacggccagatgcctggacctaaccatatgcctatgcaaggacctgggcct
aatcaactcagtatgacaaacagttccatgaacatgccttcaagtagccatgggtccatg
ggcggttataatcactcagtgccatcttcgcaaagcatgccagtgcagaatcagatgact
ctgagccaaggacagcccatgggcaactatggccccagaccaaacataaacatgcaacca
aaccaaggtccaatgatgcaccagcagccacctccttcccagcaatataatatgccacag
ggaggtgggcaacattaccagggacagcagccaccaatgggaatgatgggccaagttaac
caaggaaatcacatgatgggtcagagacagattcctccgtataggccaccacagcaaggc
ccaccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtgga
caaggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggt
tatcagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaa
cattactacgaaggaggaaactcgcagtatggtcagcagcaagatgcatatcaaggacct
cctcagcagcagggttaccctccacagcagcagcagtacacaggccagcaaggttatcca
ggacaacagcagggttatggtccttcacagagtggtccaggacctcagtatcctaactat
ccacaagggcaaggccagcagtatgcagcatacaggcccacacagcctggaccaccacag
ccaccacaacagaggccttatggatatgaccaggggcaatatggaaactatcagcagtga
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