Trachemys scripta elegans (red-eared slider): 117874177
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Entry
117874177 CDS
T07347
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117874177 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117874177 (CRNKL1)
03036 Chromosome and associated proteins [BR:
tst03036
]
117874177 (CRNKL1)
Spliceosome [BR:
tst03041
]
Complex B
Other components
Prp19-related factors
117874177 (CRNKL1)
Complex C
117874177 (CRNKL1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117874177 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
117874177
NCBI-ProteinID:
XP_034619932
LinkDB
All DBs
Position
3:6660959..6684804
Genome browser
AA seq
686 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDYRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE
EQAWHSYINFELRYKEVERARTIYERFVIVHPDVKNWIKYARFEEKHSYFAHARKVYERA
VEFFGEEHMNEHLFVAFAKFEENQKEFERVRVIYKYALDRIPKQEAQELFKNYTVFEKKF
GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDTVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQACVELIPHKKFTFAKMWLLYAQF
EIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFTPENCTS
WIKFAELETILGDTDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRL
LQRTQHVKVWISFAQFELSAGKEESLLRCRQVYEEANKTMRNCEEKEERLMLLESWRNFE
EEFGTDCNKERVDKLMPDKVKKRRKLKAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KLWKKQQQENEAEEMDPDKDIDESES
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacggcggctgggaagcagcgaatccccaaagtggcgaaggtgaaaaacaaa
gcgccagcagaagtacagatcacagcagaacagctattaagagaagcaaaggagagagaa
cttgaacttcttccaccacctccgcaacaaaagatcacagatgaagaagagctaaatgac
tacaagcttcggaaaaggaagacctttgaagataatataagaaaaaacaggactgttatc
agtaactggataaagtacgcacaatgggaggaaagcctaaaagaagtacaaagagctcgt
tccatctacgagcgtgctttagacgtggactacagaaatgtcactctctggctgaagtat
gcagaaatggaaatgaagaaccgccaggttaaccatgcccgcaatatctgggatcgagcc
atcactaccctccccagggtcaaccagttctggtacaagtatacttacatggaagagatg
ttggggaacgttgctggagcacgtcaggtgtttgaacgctggatggagtggcaaccggag
gaacaagcttggcattcctatattaactttgaactgagatacaaggaggtggagcgggca
cgcactatttatgagagatttgtcattgtgcatcctgatgttaagaattggatcaagtac
gcccgctttgaagagaaacacagttactttgcccatgcaagaaaagtatatgagagagca
gtggagttctttggagaagaacatatgaatgagcatttgtttgtggcctttgcaaaattt
gaggagaaccagaaagaatttgagagggtgagagtcatctacaaatatgccctggataga
attccaaaacaggaggcccaagaactcttcaaaaattacaccgtctttgaaaagaagttt
ggagacagaagaggcattgaagacattattgtcagcaaaaggagattccagtacgaagag
gaagtgaaggctaatccccacaattacgatgcatggtttgattacttgcggttggttgaa
agtgatgcagatccagataccgtacgtgaagtttatgaaagagccattgccaacgttcca
ccaattcaagagaagagacattggaagagatacatatatctctggatcaactatgcattg
tatgaagaactggaggcaaaggatccagaacgaaccagacaggtatatcaagcatgtgtg
gaactcattccccacaaaaagtttacatttgccaaaatgtggctgttgtatgctcagttt
gaaataagacagaaaaatcttccatttgccagaagagctttgggaacatccataggaaaa
tgcccaaagaacaaactatttaaaggctacattgaactggagctacaactgcgggagttc
gatcgctgtcggaaactgtatgaaaaattcctagagtttacacctgaaaattgcacgtca
tggattaaatttgctgagttagaaaccattcttggtgatactgacagagcccgggcaata
tacgaattggctattggtcaacctcggttagacatgccagaggttctttggaaatcctac
attgactttgaaattgagcaagaagagtatgagaaaacaagaaacctttaccgcagattg
cttcagcggacacagcatgtcaaggtatggatcagttttgctcagtttgaactgtccgcg
ggaaaagaggagagcttgctcagatgcagacaggtatatgaagaggctaataaaacaatg
cgaaactgcgaagagaaggaggagagactcatgcttctggaatcctggagaaactttgaa
gaggagtttggaacagattgcaataaagagagagtagataaacttatgccagataaagtc
aagaagagaagaaaattaaaggctgaagatgggtccgacgctggctgggaggaatattat
gattatatctttccagaagatgctgccaaccagcccaacctcaaattgcttgctatggct
aaactttggaagaaacagcaacaagaaaatgaggctgaagagatggatccagacaaggac
attgatgagagcgaatcctag
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integrated database retrieval system
