KEGG   Trachemys scripta elegans (red-eared slider): 117875353
Entry
117875353         CDS       T07347                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117875353 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tst03041]
    117875353 (SF3B6)
Spliceosome [BR:tst03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117875353 (SF3B6)
 Complex B
    117875353 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    117875353 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 117875353
NCBI-ProteinID: XP_034622500
LinkDB
Position
3:complement(186243063..186251452)
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggccaagcgagccaacattcggctgcctcctgaagtcaatcggatt
ttatatatcagaaacttgccatacaaaatcacagctgaggaaatgtatgatatttttgga
aaatatggacctattcggcaaatcagagttggaaacactccagagactagaggaacagca
tatgtagtttatgaagacatctttgatgccaagaatgcttgtgatcatctgtcgggattc
aatgtgtgcaacagataccttgttgtcttgtactacaatgcaaacagggcattccaaaaa
atggacacaaagaagaaagaagagcagctgaaacttctcaaggagaaatatggaataaac
acagacccaccaaaataa

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