Trachemys scripta elegans (red-eared slider): 117875406
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Entry
117875406 CDS
T07347
Symbol
NEIL2
Name
(RefSeq) endonuclease 8-like 2
KO
K10568
endonuclease VIII-like 2 [EC:3.2.2.-
4.2.99.18
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117875406 (NEIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117875406 (NEIL2)
Enzymes [BR:
tst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117875406 (NEIL2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117875406 (NEIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
RFX5_DNA_bdg
Motif
Other DBs
NCBI-GeneID:
117875406
NCBI-ProteinID:
XP_034622596
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All DBs
Position
3:complement(193593534..193600677)
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AA seq
339 aa
AA seq
DB search
MPEGPSVKRFQLLTAPFVGQVVAKVGGSSRQRNLKDLKAMRLQDSQASGKNLFLAFGAAL
EAWTMGGSPSPGPVEEEPTIQGEADRGACSLTLAQEGQEDEVSQLSPKEHSVQRKQETEC
SVPDAADAAGGIWKWLRFHFGLFGSIRANEFSRANKANKRGDWKDPVPRLVLNFDSGGFL
VFYNCRIHWCTSPAVEPASDILSPKFHRGQALAALRQPTSICYTLLDQRYFSGLGNIIKN
EILYLARIHPLSQGSLLALSDLESLLDHAVQFSTDWLHKKLAGKGLHYQIYLKEKCPLGH
EVMQGTFGPRDGFKRLSWWCPQCQPLVPPEGNDPKSLKR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggcccgtctgtgaagaggttccagttgctgactgctccttttgtggggcag
gtagtggccaaggtgggaggaagcagcaggcagagaaacctgaaggatctgaaagcaatg
aggctccaggactctcaggcctctggaaagaatttattcctggcattcggtgccgctctg
gaagcatggaccatgggtggaagcccatctccaggtcctgtggaagaagagccaaccatc
caaggagaggctgaccgcggggcatgctcccttacccttgctcaggaaggacaggaggat
gaggtctctcagctaagccccaaagaacacagtgtgcagagaaagcaggaaacagaatgc
tcagtgcctgatgccgcagatgcagcagggggcatttggaaatggctgcgcttccatttt
ggtttgtttggcagcatccgggctaatgagttctcgagagctaataaggcgaacaaaaga
ggggactggaaggatcccgtgcccaggttggttctgaacttcgacagcgggggcttcctc
gtcttttacaactgccggatccactggtgcacctctcccgctgtggaacctgcttctgac
atcctgtctcccaagttccatcgggggcaggccttggcagcccttcgccagccgacgtcc
atctgctacactcttctggaccagagatatttctccggtctggggaacatcattaagaac
gagatcttatatttggcaaggatccacccattatcgcaaggctcgctcttggctctctca
gatctcgaatccttgctagatcatgccgttcagttcagcacagactggctgcataagaag
ctggctggaaaaggattacactatcagatctacctgaaagaaaaatgtcctcttgggcac
gaggtgatgcagggaacttttggaccccgagatgggtttaagaggcttagctggtggtgt
cctcagtgccagcctctagtacctcctgaagggaatgaccccaaatcgcttaaacgctga
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