Trachemys scripta elegans (red-eared slider): 117876271
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Entry
117876271 CDS
T07347
Name
(RefSeq) butyrophilin subfamily 1 member A1-like isoform X1
KO
K06746
immune costimulatory protein B7-H3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117876271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117876271
CD molecules [BR:
tst04090
]
Proteins
117876271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_3
Ig_3
V-set
ig
Ribosomal_L32e
C2-set_2
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
117876271
NCBI-ProteinID:
XP_034624142
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All DBs
Position
4:complement(140055174..140066658)
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AA seq
415 aa
AA seq
DB search
MSRGHGPEQSQVFPLQRPAPALFLVPSSPLPPAPSRSLLLPPDALRVRQDRPWLFSPPAK
MLRLLWCPVLLGWVTAGPDTAPQASDGPQLWARAGQDITLVCRARAPPKADLRHLRVHWH
LLREPAGGSVVHSYHTGADQLGDQAEEFRGRTRLLLQGIRQGVVALSLTGVRPSDSGTYR
CFIMDSQADSIMDIVLHVAAPYEPPQLAVLSRAGGRLALQCRSVGGYPQPEITWHDGNGT
RLSQDEPVELQRSRQGAFEVWSSLSLTPRPGGSVCCALSHRPLQQNMSVCKTLPDPVQYF
KYNIRPGRGQRASPGNHPPVGTGTITWPALRALGNQDVQPPSARLRDGRKPSGIDNRARS
SSKGQGLMPSVGHSGKRKMKHMLPTGCSTVAKDSRCSPVCRDRAQGNCGASRSAC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagggcatggcccagaacaatcccaagtattccctctccagcgccccgccccg
gctcttttccttgtcccatcttcccctctgcctcctgccccgtcccgctccctgctgctt
cccccagacgctctgcgcgttcggcaggatcggccctggctgttctcccctccggccaag
atgctgcggctgctgtggtgtcccgtgctgctggggtgggtcactgcgggaccagacacg
gcccctcaggcgagcgacggcccccagctctgggcccgggccggccaggacatcacgctg
gtgtgcagggcccgagcgcccccaaaagccgacctgcgtcacctgcgcgttcactggcac
ctcctgcgggagccggcggggggctccgtggtgcacagctaccacacgggggccgaccag
ctgggagaccaggccgaggagttcaggggccggacgcggctcctcctacaggggatccgc
cagggggtggtggccctgagcctgaccggtgtgcggccctcggacagcggcacgtaccgg
tgcttcatcatggacagccaggctgacagcatcatggacatcgtcctccacgtggcagcc
ccgtacgagcccccgcagctcgccgtgctctcccgggctgggggacggctggccctgcag
tgccgctccgtggggggttacccccagcccgagataacgtggcacgatgggaacgggacc
cggctgagccaggacgagccggtggagctgcagcggagcagacagggggccttcgaggtg
tggagcagcctgtcgctgacgccccgccccggggggtccgtctgctgcgccctgagccac
cggcccctgcagcagaacatgagcgtctgcaagaccctcccagatcctgtgcagtacttt
aagtacaacatccgtcctgggagaggccagcgggcgtcaccgggaaaccacccacccgtg
ggcacaggcactatcacctggcctgcactcagagccctggggaaccaagacgttcagccg
ccatcagccaggctacgcgacgggcgtaaaccaagcggtatcgataaccgagctcgcagc
agctccaagggccaaggcttgatgcccagcgttggccacagtggcaagaggaagatgaag
cacatgctgcccacgggatgctccacagtggcaaaggactcgaggtgctccccagtgtgc
cgagatcgcgcgcaaggtaactgtggcgcgagccgctcggcttgctag
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