Trachemys scripta elegans (red-eared slider): 117876516
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Entry
117876516 CDS
T07347
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04621
NOD-like receptor signaling pathway
tst04623
Cytosolic DNA-sensing pathway
tst04625
C-type lectin receptor signaling pathway
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117876516
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117876516
04623 Cytosolic DNA-sensing pathway
117876516
04625 C-type lectin receptor signaling pathway
117876516
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117876516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117876516
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tst04054
]
117876516
Membrane trafficking [BR:
tst04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
117876516
Pattern recognition receptors [BR:
tst04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117876516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_NLRC3
LRR_TMOD-LMOD
PYRIN
WHD_NOD2
LRR_6
LRR_CARMIL
FISNA
LRR_1
LRR_MHP1-HER1-GIP3
LRR_NLRC4
LRR_8
nSTAND3
LRR_4
AAA_16
RuvB_N
nSTAND_NTPase5
HTH_NLRC5
NB-ARC
TsaE
AAA_25
Sde2_N_Ubi_vert
NUP82_beta-prop
Motif
Other DBs
NCBI-GeneID:
117876516
NCBI-ProteinID:
XP_034624670
LinkDB
All DBs
Position
4:complement(113865387..113893382)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSEDKTLTDILVQQLEDLEKKDLKKFKHKLSDFRYEGTKRKIPRSKLENADEMDVASLLI
EFYGEDSAANVAIEIFTKIGLKNSAVKLQEEKETDYRPKYKEHTREKYQLIEERNNQVGE
CVELNTRYTKLLIVKEHRDQKERKHEIRAKGKEHAEIMAKRASSTKLETLFDASGNRQTP
LRTIVLQGAAGIGKTMLAKKLMVDWAFGKLYPGKFDYIFYINSREMNCISERRSVADLIL
NNCPDRNAPIKDILVNPEKLLFIIDGFDVLKFSFDQQESSLCTDPCQTKPVEIILSSLLR
KTILPKSYLIITTRPTALDKLRQCLKFPHIATILGFSEEDRKEYFCKFFANAIQAKQALD
FVKENEMLFTMCFAPIVCWILCTVMKQQMESGEDLAKSSKTTTSVYMLFLSSLLDNHSNS
KESVHTDLKKLCSLAADGILNNKILFEEEDARKHGLDGSDIQSLFLTKNVFQKDIGFESV
YSFIHLSFQEFFAALFYLLVEDKEKGCDSVTLKKDVNEILKNYGKSRENSFTLTVRFLFG
LLNKERMNHTEKIFGCKISPEIKQNLLKWFGSVAKRSCGLTFRSVQEKQFQLELLHCLYE
IQEEEFVKSAMDHFQEIGLSNIPFTKIDHMVLSFCIKNCRNEQSLSLNDCTFGLEEQEER
QESVLRKELEEKEPKYSPPHLLCQALKDPGCKLKKISLGCCRLTSACCEDLASALKTNQS
LKELDLSGNKLGETGIKLLCKGLKHQNCSVQKLGLRGRSLTATSLGDLASVLTKNQSLTE
LDLSYSKWGDLGVKLLYKALKHPNCKLQKIKLECCLLTAACCDDLASVLGTNQTLTELDL
RNNELRDSGVKHLCAGLKRENCKIQKLVLSNCYFTVVCCGALSAVLSKSLSLRELDVCYN
KLGDAGMKLLCDGLRQPDCKLQKLRLTGCGLTPACCEDLSVVITTNQSLTELNINHDALG
DSGMKRLRDGLNSASCKLQTLLLNGEVIKRDGDGKGEEGYNGDEDYNGDEDYSGDEDYNP
EDHL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagacaagaccctgactgacatccttgtgcaacaactggaggatctcgaaaag
aaagatttaaaaaaatttaaacacaaattatctgattttcgctatgaggggacgaaacgt
aaaatcccccggagcaagctggagaatgccgacgaaatggatgtggccagtctcctgata
gagttctatggcgaagacagtgcagcgaacgtagcgatcgaaatcttcaccaaaatcggt
ctgaaaaactctgccgtgaaactccaagaggaaaaagagacagattacagaccaaagtat
aaggaacatacacgagaaaaataccaactaatagaagagaggaacaatcaagttggagag
tgtgtggaactaaacacaagatacacaaagctgctgattgtaaaggaacatcgtgaccag
aaggagagaaagcacgaaataagagccaaagggaaagagcatgcagaaatcatggcaaag
cgagctagttctactaaactggagactttatttgatgctagtggaaacaggcaaacacca
ctgagaaccattgtgctgcagggagctgctgggattggaaaaacaatgttagccaagaag
ctcatggtagactgggcatttggaaaactctatcctggcaagtttgattacatcttctac
atcaatagcagggaaatgaactgtatttctgagcgtcgaagcgttgcagatctgatttta
aacaattgtcctgacagaaacgcacccatcaaagatattttggtgaatccagagaagctt
ttgttcataattgatggttttgatgtacttaaattttcctttgatcagcaagaaagtagt
ctgtgcactgatccctgtcagacaaagccagtggaaatcatactgagcagtttattaagg
aaaacgattcttccaaaatcctacttaataatcactacgagacccaccgctctggataaa
ctccggcagtgtctgaagtttccccatattgcaacaatcctgggattctctgaagaggac
aggaaggagtatttctgcaaattctttgcaaatgccatacaagcaaaacaagctctagat
tttgtaaaagagaatgaaatgctcttcaccatgtgctttgctcccatcgtatgctggatc
ctgtgcacggtgatgaaacaacagatggagagcggagaagatctagccaaaagctcaaaa
acaaccacctcggtatacatgctctttctgtccagtttattagataaccattccaattca
aaggaatccgtacacactgacctgaagaagctatgctccttagctgcagatgggatcttg
aacaataaaatactgtttgaagaagaagatgcgaggaagcatggtttggatggatctgac
attcagtccctctttctcactaagaatgttttccaaaaagatatcggctttgaaagtgtc
tacagcttcattcacttaagtttccaagagttctttgcagctttgttctatctcttggtg
gaagataaagaaaaagggtgtgattcagtgactctgaagaaagatgtgaatgaaattttg
aaaaattatggaaaatctagagaaaattcttttaccttgacggtacgtttcctgtttggt
ctcttaaacaaagagagaatgaatcacacagagaaaatctttggctgtaaaatttcacct
gaaattaaacagaatttattgaagtggtttggatctgtagcaaaaagaagctgtggtctg
accttcagatccgtccaggaaaagcagtttcagcttgagttgcttcactgtttgtacgag
attcaggaagaagagtttgtcaaaagtgcaatggatcatttccaagaaattggtctgagc
aatattccctttacaaaaatcgaccacatggttctttcattctgcataaagaattgtcgt
aatgagcagtcgctctctctgaacgattgtacgtttggactggaagagcaggaggaaaga
caagagtcagtgctacgaaaggagttggaggagaaggagccaaaatattccccacctcac
cttttgtgtcaagcactgaaggatccaggctgtaaactaaagaaaatatccttaggatgc
tgccgtctcacctccgcttgttgtgaggatctcgcctctgctctcaagacaaaccagtct
ctgaaagagctggacctgagcggtaacaaactgggggaaacagggattaaattgctctgt
aagggactgaaacatcaaaactgcagtgttcagaaattggggctgaggggtcgcagtctc
accgctacttccttgggcgatctcgcctctgtgctcactaaaaaccagagcctgacagag
ctggacctgagctatagtaaatggggagatttaggagtgaagctgctgtacaaagcactg
aagcatccgaactgtaaactacagaaaataaagctggagtgttgccttctcacagctgct
tgttgcgatgaccttgcctctgttctcggtaccaaccagaccctgacggagctggacctg
agaaataatgagctgagggattctggagtgaaacatctgtgtgccggactgaaacgagag
aactgtaaaatacagaaactcgtgctgtccaactgttatttcacagtagtttgttgtggg
gctctctctgctgttctcagtaaaagcctgtccctgagagagctggacgtgtgctataat
aaactgggagatgcaggaatgaagctgctgtgtgatgggctgagacagccagactgcaaa
ctacagaaactaaggctgaccgggtgtggtctgacacctgcttgttgcgaagatctttct
gttgtcataactacaaaccagtcactgacagagctgaatatcaatcacgatgcgctggga
gattcgggaatgaaacggctgcgtgatggactgaacagcgcaagctgtaagctgcagaca
ctgctcttgaatggagaagttattaagagagatggagatggcaagggtgaagaaggctat
aatggcgatgaagactacaatggtgatgaagactacagtggcgatgaagactacaatcct
gaagatcatctctga
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integrated database retrieval system
