Trachemys scripta elegans (red-eared slider): 117879063
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Entry
117879063 CDS
T07347
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117879063 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117879063 (TTC37)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117879063 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_12
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_17
ANAPC3
TPR_9
Fis1_TPR_C
TPR_15
ARM_TT21_C
Rapsyn_N
DUF3856
TPR_30
BTAD
Retrotran_gag_2
TPR_20
Motif
Other DBs
NCBI-GeneID:
117879063
NCBI-ProteinID:
XP_034629877
LinkDB
All DBs
Position
6:complement(57118930..57200363)
Genome browser
AA seq
1565 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAQ
SAYRKAAELEPGQLLAWQGLANLYEKSNQTDVKENLFNVYQKLLELYESTDKQKWCDVCR
KLVELYHQEKKYLEVAHTWHKLIKIKQEEGADNAELHQLWKRLIQLLPDSTQNQDNETQQ
LLLTALEHAVNSADTVPSEDHEKLYKNFIQCLSKFPHETARLKKACDDMMVLYPTMSYPL
EVLCLHFIQSGGFTEEALRCCCRLMEMDSSSSPGLIGLGIKFLQEKKYEEAVKSLTEGLQ
QTSQCQAAWYYLAEAQMKMHKYKEAVISCNRALKISGQFDDDSGNLQQKYTALHLKAEAL
IKIAGADAAEEAISTLEQVSDINNDPVLLALKGQAYLNKGLIDQASKVAQQLVLSHPHQA
EAHALEGLIHYTQKNYQQAERSFQRAIERKAETAEYHHYLGLTYWFMGEEIRKDKTKALT
QFLKAAKLDSYMGSIFCYLGHYYRDVAGDKSRARGCYKKAFELDRTDGEAGAAAVDLSVE
LGDTETALAILTAVTERASAGTAKWAWLRRGLYYLRASQHSQAVADLQAALRADPKDSNC
WESLGEAYLSRGGYTTALKSFTKASELNPESIYSIYKAASIEQILGKYKDAIAEYQQILK
KSKEYVPALKGLGECYLMMARAALADFLDGKVLDYIEQALEYFTRATKHRPDVSCLWKLL
GDACTIVHVISSSKVNVKVLGSLLGQNEGKQMLKKSELLSLGGRCYGRALKLMSSPNTWC
DLGINYYRQAQHLTAADSDTNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVACCSGV
GNYALAQHSFIKSVQAEQINVVAWTNLGVLYLATENIQQAHEAFKVAQSLEPSYLMCWIG
QALIAEAVGSYETMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKTNRETELYRYNIVQMN
AIPAAHVVLSKYTERIQNDASAFTMLGYLNEYLQLKKQATDAYQRAVSLLKNSEDKEKYN
ISMQNYGRSLCAIGQYDKAIQAYMSTPLTELDGIVGVALAYFKKGLLQDSIKAYERALSL
AESEQDKAYILTALAIMEYKQNKVDAAKTLLFKCSILKEPTIESLQALCTLGLAKQDATL
ATAALKELLKHTKSKDNVYERCLITSAVYALQGRNVGVQRQASKAVHSNPDDPALWALLS
QLVPLYTPQNAKGGAVAGNVAHILDLNHGKKALLHTAVNQLAVGCHSAEDEKNNALKDIQ
KAVHLFPDDPATWAVLMGACHAENTVVYLRDTQPKRRDLEMTLVATVSAKTKEKDLSAEY
IQALEDWSLCQAITGLKETGRITEAEALCTKGLKSCPSHPDLFLLLRQVQCKQLFQSHKE
LPDAILEELHKTVMSNSTSVTAWHWLAKVYQSQRMMVAAEMCYRKSLQLASQQGSWNGKL
SSLLRLAMLALEICMANISNDHWPSLVQEATTEALKLSFCPLAVLLQALLQYNRKMGARE
TRRMLERVVYQPGYPETIVSVARWYLLRHLYAKDDYELIDALVANAKANGDTRSLELDKK
LSASA
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattgaaaagtgccagagatgcaataagaaataaa
gaatacaaagaagccttaaaacattgcaaggcagtgctgaaacaagagaaaaataactac
aatgcctgggtgtttattggcctggcagctgcagagttagagcagcctgatcaggcccaa
agtgcgtacagaaaggctgctgaacttgaaccaggccagctactggcatggcagggatta
gcaaatttgtatgagaaatctaaccaaacagatgtcaaagaaaacttgttcaatgtttac
caaaagctcttggaactctatgaaagtactgacaagcagaagtggtgtgacgtatgtagg
aaacttgtggaactgtatcaccaagaaaaaaaatacctagaggtggctcacacatggcat
aaactgataaagataaaacaggaggaaggtgcagataatgctgagctccaccagctatgg
aagaggctgatccaattactgccagacagtacacagaatcaagataatgagacacagcag
ttgcttttgactgcattagaacatgcagtgaactctgcagacacagttcccagtgaagac
catgaaaagctttataaaaacttcattcagtgtttgtcaaaatttcctcatgagactgct
aggctgaagaaggcctgtgatgatatgatggttttgtatcctaccatgagttatccttta
gaagtgctctgcttgcactttattcagtcaggcggtttcactgaagaggccctgcgttgt
tgttgcaggcttatggagatggactcaagtagcagcccgggccttattggtttaggtatc
aaattcctccaagaaaaaaaatatgaagaagctgtcaagagcctaactgaaggtttgcag
cagaccagccaatgtcaagcagcatggtattatctggcagaggcgcaaatgaaaatgcat
aaatataaagaagctgttatttcctgcaatcgagctcttaagatatcaggacaatttgat
gatgatagtggcaatctacagcagaaatacactgcccttcatttgaaagcagaggctctt
attaaaatagcaggtgctgacgctgcagaagaagccattagcactcttgagcaggtttca
gatataaataatgacccagtgcttctagctctcaaaggtcaggcttatctgaacaaaggt
ttgattgatcaagcttcaaaggttgcacaacagctcgtgttgtcccaccctcaccaggca
gaagcccatgctcttgagggtttgattcattatacccaaaagaattatcaacaggcagag
agaagctttcaaagagcgattgaaagaaaagctgaaactgcagagtaccatcactaccta
ggactcacttactggttcatgggtgaagaaataaggaaagataaaacaaaagctctcact
cagtttctgaaggctgcaaaattggacagctacatgggaagcatcttctgctatttaggt
cattactacagagatgtagctggagacaaaagccgagctcgtggctgctataaaaaggct
tttgaactagatagaactgatggagaagctggagcagcagctgtagacttaagtgtggaa
cttggagacacggagactgctctggcaatcttgactgcagtaactgaaagagcaagtgct
ggtacagcaaagtgggcctggcttcgtcgtggactttactacctgagagccagtcagcac
tcccaagcagtggctgacttgcaggcagctctaagggcagatccaaaggactccaactgt
tgggagtctctaggagaggcatacctgagcagaggtggatatacaacagcactgaagtcc
tttacaaaggccagtgagctgaatcctgaatcgatatacagtatttacaaggctgcatca
attgagcagattctaggaaaatataaagacgctatagctgaataccaacaaatcttaaag
aagtcaaaagaatatgtacctgcactcaaaggtctgggtgagtgctatctcatgatggca
cgggctgctcttgcagactttcttgatgggaaagttctagattacatagaacaagcactt
gaatattttacacgagcaacaaagcatcgtcctgacgtatcttgcctttggaaactactt
ggggatgcctgtactatcgtgcatgtcatttcatcatccaaagtgaatgttaaagttctg
ggatcccttcttggtcagaatgaaggcaaacaaatgctgaagaaaagtgagctcctcagt
ttgggaggaaggtgttatggcagagcattaaaactgatgtcttcacctaacacatggtgt
gatcttggaataaactactatcgtcaagcacagcacctaacagcagccgatagtgacacg
aatgagatcagtgaactgttagagaaatctttacagtgtctcaaaaaagccgtgaggctt
gatagtaaaaaccatctctattggaatgcacttggtgtggttgcctgttgcagtggtgtt
gggaattatgctcttgctcaacattcattcatcaaatctgttcaagctgaacaaataaat
gttgttgcctggaccaacttgggggttttgtacttagcaactgaaaacattcagcaagct
catgaagccttcaaggtagctcagtcccttgagccatcttacttaatgtgctggattgga
caggctcttattgcagaggcagtgggcagctatgaaactatggatctctttaggcacacc
actgaactcagtatgcatactgagggagcaaaaggctatgctcattgggtatgctcaacg
ctgcaagataaaaccaacagagaaacagagctgtatcggtacaacattgttcaaatgaat
gctattccagcagcgcatgtggttttaagcaaatacacagaaagaattcaaaatgatgca
tctgctttcacgatgctgggttatttgaatgaatatctgcaactgaaaaagcaggcaaca
gacgcttatcaaagggcggtctcattgctgaagaactctgaagataaagaaaagtataac
atatcaatgcaaaattatggtagatcactctgtgccataggtcaatatgacaaggccatc
caggcttacatgtccactcctctcacagagttagatggcatcgtaggagttgcactagct
tacttcaagaaagggcttttacaagacagcattaaagcttatgagagagccctatctctt
gccgaatctgaacaagacaaagcctatatcttgacagcccttgcaataatggagtacaaa
cagaataaagtggatgctgcaaagacgttgctgtttaaatgctctatattaaaggaacct
actatagaaagcctgcaggctctgtgcactctaggtctggcaaagcaggatgctacactt
gcaacagcagcacttaaagaattactgaagcacacaaaaagcaaggataacgtttatgag
agatgccttattacatctgctgtgtatgcgctgcaaggtagaaatgtgggagtgcagagg
caagcttccaaagctgtccatagtaacccagatgatcctgccctttgggctcttctgtct
caacttgttcctctgtatacgccacaaaatgcaaagggtggagctgtggcaggaaatgtt
gctcatatacttgatttaaaccatggaaagaaagccctgctgcatactgcagttaatcag
ttggcggtgggatgtcattcagctgaagatgagaaaaacaatgcactgaaagatatccaa
aaggcagtccatctttttccagatgatcctgctacatgggcagtgctaatgggtgcctgc
catgctgaaaatactgttgtctatttgagagacacacagcctaagagaagagacctagaa
atgacacttgtagccacagtttcagccaaaactaaagaaaaggatctttcagctgagtac
atccaggctcttgaagactggtctctttgtcaggctattactggtttaaaagagactggt
agaattacagaagctgaggctctctgcacaaagggtttaaaaagttgccccagtcaccca
gatctgttcctgctcttgagacaagttcagtgtaaacagctttttcagtcacacaaagag
cttccagatgccattttggaggaacttcataaaactgtcatgtccaactccacttcagta
acagcatggcattggctcgcaaaagtataccagtctcaaagaatgatggtcgctgcagag
atgtgttacagaaagagtctacagttggcatcccaacagggcagttggaacgggaagtta
tcaagtttgctcaggctagctatgcttgcactggaaatctgcatggctaacatttcaaat
gatcattggccatccttggttcaggaggcaacaactgaagccttgaaactttccttctgc
ccactggctgttcttctgcaagcgctgttacagtacaatcgcaaaatgggggcaagggag
actcgtcgaatgttggaaagagtggtgtatcagcctggatatccagaaaccatagtatca
gttgcacgctggtaccttctaagacatttatatgccaaagatgattacgaattaatagat
gcacttgtagcgaatgccaaagctaatggagatactagatctctggaactagacaagaaa
ttatcagcatctgcctag
DBGET
integrated database retrieval system
