Trachemys scripta elegans (red-eared slider): 117883177
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Entry
117883177 CDS
T07347
Symbol
GPC1
Name
(RefSeq) glypican-1
KO
K08107
glypican 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117883177 (GPC1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117883177 (GPC1)
Proteoglycans [BR:
tst00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117883177 (GPC1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Others
117883177 (GPC1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
TINF2_N
Motif
Other DBs
NCBI-GeneID:
117883177
NCBI-ProteinID:
XP_034638151
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Position
9:complement(59410560..59717089)
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AA seq
551 aa
AA seq
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MHFFPWGFWLLCVAASSARGDSGSKAKSCTEVRQFYATKGFSLHGVPQAEISGEHLRICP
QGYTCCTSEMEENFAKKSQSEFEDMMTEASRSAQVTLTSQYKNFDGYFQDLLNKSEKALH
DTFPSTYGELYSQNVKDFFKELYSELRRYYRGSNINLEEALNEFWTRLLERLFKLMNPQY
HITDEYLDCMVKHAEQHKPFGEVPRDLKLKATRAFIAVRSYVQGLSVGSDVVKKVSQVSL
SHECTRAIMKLVYCPYCRGMSSVKPCNNYCHNVMKGCLANQADLDTEWRNLIDSMLLVAD
RFDGPSNVDTVIGTIHTRIAEAISNMQENRESITAKVFQGCGNPKISTKASSGEDKKRRG
KAVTDDKSSGLGLEKLVSDAKGKLRDIKDYWVALPSTLCNEKITSGSVNEDKCWNGMAKG
RYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRNAYNGNDVDFQDAS
DDISGSGSGDGCPDEVCGKRLSKNPSTRQPEVHAIPNQSGRGINGASSKFLPSSFLIFLS
VAVIATQYLRR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcttcccgtggggattttggcttctgtgtgtcgccgcctcctcggctcggggt
gacagtggcagcaaagcgaagagctgcaccgaggtccggcagttttatgcgaccaaagga
ttcagcctgcacggggtaccccaggcggagatctcaggggaacacctgagaatctgcccg
cagggctacacctgctgcaccagcgagatggaggagaatttcgcaaaaaaaagccaaagt
gaatttgaagacatgatgacagaagccagccgctctgcacaggtgaccctaacatctcag
tacaaaaactttgatggttatttccaggatttgttgaacaagtcagagaaggccctccat
gacacttttcctagcacgtatggagagctgtatagccagaacgtcaaggacttcttcaag
gaattgtacagcgagctgcggcgctattaccggggctccaatatcaacctggaagaggcc
ctcaacgagttctggacacgcctgctggagcgcctcttcaagctgatgaatccccagtac
cacatcactgacgagtacctggactgcatggtgaaacacgccgagcagcacaagcccttt
ggagaagttccgagggacctgaagctgaaggcgacgagagcgttcatcgcagtgcgctcc
tatgtgcaggggcttagcgtgggcagtgatgttgtcaaaaaggtctctcaggtgtctctt
agccatgagtgcactcgtgccataatgaagctggtgtactgtccgtattgccggggcatg
tctagtgtgaagccatgcaacaactactgtcacaacgtcatgaagggctgcctggccaat
caagcagacctggacacggaatggaggaacctgattgattctatgctgctggtggctgac
cggtttgatggaccatccaatgtagacactgtaattggtaccattcacacccggattgct
gaagccatttctaacatgcaggaaaacagagagtctatcacagccaaggttttccaaggt
tgtggaaatcccaaaatcagcaccaaagcatccagtggagaggataagaaaagaagggga
aaagctgtcaccgatgataaatcctcagggcttggactggagaagctagtttctgatgcc
aaagggaagctgagagatatcaaggattactgggttgcccttccaagcacactttgcaat
gagaaaataacatccggctcggtgaacgaggacaagtgctggaacggaatggccaagggg
aggtatttaccagaggtgatgggagatggtctggccaatcagattaataatccagaggta
gaggtggacatcaccaagccagatatgaccattcgtcagcaaatcatgcagctgaagatc
atgacaaaccgactgcgcaatgcttacaatgggaatgatgtggatttccaggatgctagt
gatgacatcagtggctctgggagcggtgatggctgccctgatgaggtctgcggcaaaaga
ctttccaagaaccccagcaccaggcagccagaagtacatgctattcctaaccagtctgga
cgtggcataaatggggctagcagcaaatttttgccttcctccttcctaatcttcctttct
gtggctgttattgcaacacagtacttgcggcggtaa
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