Trachemys scripta elegans (red-eared slider): 117886673
Help
Entry
117886673 CDS
T07347
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117886673 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117886673 (CNGB1)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117886673 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117886673
NCBI-ProteinID:
XP_034644574
LinkDB
All DBs
Position
13:complement(41938652..41984878)
Genome browser
AA seq
834 aa
AA seq
DB search
MSKQTRDVELDRLVHDQPLDCRSSSPCSQGTVEQLPNVPSYQFSTTSRIPVLISKKRKSG
VVNPSFLNEEWSPSHPLEPSSSRYPIVKVKDVDAKSSSAGVQKHDPHLPPPSRNNSHTLM
VPGAPVAPKRRKLRSEEDSIEDASPVESPGRASPGQSNLQRKNLPERAGSATSQNSLTIN
DRLQELVRLFKDRTEKVKEKLIDPDTTSDDETPVASPSKKTSAEPPPPPEEKETAAEVEA
HYCEMLCCKFRSCPWPSRVKKYRFPSSIDPLTNLMYVLWLFFVVLAWNWNCWLIPVRWAF
PYQTPENLHWWLLVDYLCDLIYFLDITVFQVRLQFVQGGDIITDKKAMRQNYLKSRRFKM
DVLCLLPLDFFYFKVGVNSLLRLPRCLKYMAFFEFNNRLEAILSKAYVYRVIRTTAYLLF
SLHVNSCLYYWASSYQGLGSTIWVYDGKGNSYIRCYYWAVKTLITIGGLPDPQTLFEILF
QLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPRSVQNRVKTW
YEYTWHSQGMLDESELMVQLPDKMRLDIAIDVNYDIVSKVALFQGCDRQMIFDMLKRLRS
VVYLPNDYVCKKGEIGREMYIIQVGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAVGGGN
RRTANVVAHGFTNLFILEKKDLNEILVHYPESQKLLRKKAKKMLKNNSKPKEEKGMPKDV
LIIPPRPGTPKLFQAALVAAGKMGGKGKLAHIRWKLRELKAMQAMQESSSTPVLLKLPVR
HDSSRASCKSGDHPDEEDIISKSSDNSVFIRMSPAPQSSEQILSVEVSDKEEKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaaaccagagacgttgagttagatcgcctggtgcatgaccagccgcttgac
tgcaggagctcctccccttgctcccaaggcacagtagagcagctacccaatgttcccagc
taccaattctccaccacctcccgcatccccgtcctcatctccaaaaagcgaaagtctggt
gtggtgaaccccagttttttgaatgaggaatggtccccttctcatcctttagagccatcg
tccagtagatatcccattgtaaaagtcaaggatgtcgacgctaaaagcagctctgcaggg
gtgcagaaacacgacccccatctgcccccgccttcccggaataattcccacacactcatg
gtaccaggcgcgcctgtggctccgaagaggaggaagctacgctctgaggaggacagcata
gaggatgcatccccagttgagtctccaggcagagcctcacctggccagtccaacctacag
agaaaaaacttgccagagcgagcaggttcagcaacaagccagaacagtttgacaatcaat
gaccggctgcaggagctggtgaggctctttaaagacaggactgagaaagtgaaagagaaa
ctgattgacccagatactacctctgatgatgagacccctgtggcatccccttccaagaaa
acctctgcagaaccaccgccgccaccagaagaaaaagagacagcagctgaagtggaggca
cattactgtgagatgctctgctgcaaattcagatcctgcccctggccaagccgtgtgaaa
aagtatcggttcccaagcagcatcgaccctctcaccaatttgatgtacgtgctgtggctc
ttttttgttgttctggcctggaattggaactgctggctgattccagtacgctgggccttt
ccgtaccaaacgcctgaaaacctccattggtggctacttgtagactatctctgcgacctc
atctactttctggacatcactgtctttcaggtccgcctgcagtttgtccaaggaggagac
ataattactgataaaaaggccatgagacagaactacctgaaatcccgacgcttcaagatg
gacgtgttgtgccttcttcccctggatttcttttacttcaaagttggcgtaaattctctc
ttgcggttgcctcgctgtttaaagtacatggccttctttgagtttaataaccggcttgaa
gctatcctgagcaaggcatatgtttacagagtgataaggaccacagcctatttactcttc
agcttacacgtgaactcatgcctgtattattgggcatcgtcgtaccagggactgggttct
accatatgggtctatgacgggaagggaaacagttatatccgctgctattactgggctgtc
aagactctaattactattgggggactgcctgaccctcaaacattgtttgagatactcttc
caacttctgaactacttcacaggggtctttgctttctctgtcatgatcggccagatgaga
gatgtagttggcgctgctacagcaggacaaacttattatcggagttgcatggacagtacc
attaaatacatgaatttctacaaaatccccagatccgttcagaatcgggtcaaaacatgg
tatgaatacacttggcattcccaaggcatgttagacgaatcggagctgatggtgcagctg
ccagacaagatgaggctggatattgctattgatgtgaactacgacatagtcagcaaggtg
gcgctctttcagggctgtgaccggcagatgattttcgacatgttgaagaggctccgatct
gttgtttacttacctaatgattatgtgtgtaagaagggggaaattggccgagagatgtac
attatacaagttggacaggtgcaggtgcttggaggacctgatggcaaaactgtgcttgtg
acactgaaagctggatcggtgtttggagaaataagcttgttggcagtgggaggtggaaat
cgtcgcacagcaaatgttgtggctcatggatttactaaccttttcatcttggagaagaag
gacttgaatgaaatattggtgcattatccagaatctcagaagctgctgcgtaagaaggct
aagaaaatgctgaaaaacaacagtaaacccaaagaagaaaaaggcatgccaaaagatgtc
cttatcattcctccaagacctgggacacctaaactctttcaagctgccctggtagctgca
ggaaagatgggaggcaaaggaaaacttgcccatatcagatggaaattgcgagagctgaaa
gcgatgcaagctatgcaggagtccagttccactccagttctgctgaaattaccagtccgc
catgattcatctagagcctcctgcaaatcaggtgaccaccctgacgaggaggatatcatc
tcaaagtcttcagataattcagtctttattcgcatgagtcctgccccacaaagcagcgaa
cagattctttctgtggaggtttcagacaaggaagaaaagaaatga
DBGET
integrated database retrieval system
