Trachemys scripta elegans (red-eared slider): 117889138
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Entry
117889138 CDS
T07347
Symbol
FARSA
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117889138 (FARSA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tst01007
]
117889138 (FARSA)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117889138 (FARSA)
Enzymes [BR:
tst01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117889138 (FARSA)
Amino acid related enzymes [BR:
tst01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117889138 (FARSA)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117889138 (FARSA)
Prokaryotic type
117889138 (FARSA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
MarR_2
Motif
Other DBs
NCBI-GeneID:
117889138
NCBI-ProteinID:
XP_034648897
LinkDB
All DBs
Position
16:complement(16927263..16935923)
Genome browser
AA seq
504 aa
AA seq
DB search
MSPAMATDGPALAELLLQQLERAGGGGLGSLEAAAALGLEHQQLVGAVKSLQALGEVIEA
EQRSSKRWELTPEGKEIVQEGSHEARVFDSIPAEGLPQSELMKLPSGKVGFSKAMSNKWL
RLDKNADGGPRIFRAVESVRDSVREKLQLVQQGEAESLEEKDRNELKKRKLLMEVIVKTY
WIRKGSAFSTTVTKQETDLTPEMLASGSWRDLKFKAYNFEALGIMPESGHLHPLLKVRTQ
FRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQDPAEATDFPMDYL
KRVKKIHSQGGYGSQGYKYDWKLEEARKNILRTHTTAVSARMLYRLAQQEKFTPAKYFSI
DRVFRNETLDATHLAEFHQIEGVVADYGLTLGDLMGTLREFFTKLGISQLRFKPAYNPYT
EPSMEVFSYHRGLQKWVEVGNSGIFRPEMLLPMGLPEGVSVIAWGLSLERPTMIKYGINN
IRELVGHKVNLQMVYDGPLCRLDA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgccatggcgacggacgggcccgcgctggcggagctgctgctgcagcagctg
gagcgggcggggggcggcggcctgggcagcctggaggcggccgcggcgctgggcctggag
caccagcagctggtgggggccgtgaagagcctgcaggcgctgggggaggtcatcgaggct
gagcagcgatcctctaaacgctgggagctgacacccgaggggaaggaaatcgtccaggag
ggaagccacgaggcgcgtgtctttgacagcatccctgccgaagggctgccccagagcgag
ctgatgaaactgccgagtgggaaagtggggttcagcaaggccatgtccaacaagtggttg
cggctggacaagaacgcggacgggggcccacgcatcttccgggctgtggagagcgtgcgg
gactcggtgcgggagaagctgcagctggtgcagcagggagaggctgagagtctggaggag
aaagacaggaacgaactgaagaagcggaaactcctgatggaagtgatcgtcaagacctac
tggatccggaaaggcagcgccttcagcaccacggtcaccaagcaggagacggacctcact
ccggagatgctcgccagcggctcatggcgtgacctgaagttcaaggcgtacaacttcgag
gcgctggggatcatgcccgagagcgggcacctccacccgctgctcaaggtccgcacccag
ttcagacagatcttcctcgagatgggcttcacagaaatgcccaccaataacttcatcgag
agctccttctggaacttcgacgccctcttccagccgcagcagcacccggcccgcgaccag
cacgacaccttcttcctgcaggatcccgccgaagccacggacttccccatggactatctg
aagagagtgaagaagatccactcgcaaggaggctacggctcccaggggtacaaatacgac
tggaagctggaggaggcgcggaagaacattctgcggacgcacaccacggccgtcagcgcc
cgcatgctctaccggctggcccagcaggagaagttcacccccgccaagtatttctccatt
gaccgggtcttccggaacgagacgctggacgccacccacctggccgagttccaccagatc
gagggggtggtggccgactacggcctgacgctgggggacctcatgggcaccctgagggag
ttcttcaccaaactggggatcagccagctgcgtttcaagccagcctacaacccctacacg
gagcccagcatggaggtgttcagctaccaccgagggctccagaagtgggtggaggtgggt
aattcggggatcttccgcccggagatgctgctgccgatggggctgccggagggcgtgtcg
gtcatcgcctggggcctctctctggagcgccccaccatgatcaaatacggcatcaacaac
atccgggagctggttgggcacaaggtgaacctgcagatggtgtacgacggccccctctgc
cgcctggacgcgtag
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