Thioalkalivibrio paradoxus: THITH_16960
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Entry
THITH_16960 CDS
T03590
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
tti
Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:
tti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tti03016
]
THITH_16960 (gidA)
03036 Chromosome and associated proteins [BR:
tti03036
]
THITH_16960 (gidA)
Transfer RNA biogenesis [BR:
tti03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
THITH_16960 (gidA)
Prokaryotic type
THITH_16960 (gidA)
Chromosome and associated proteins [BR:
tti03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
THITH_16960 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
AlaDh_PNT_C
HI0933_like
DAO
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AHE99699
UniProt:
W0DMB0
LinkDB
All DBs
Position
3640940..3642811
Genome browser
AA seq
623 aa
AA seq
DB search
MRNLFDVIVIGGGHAGTEAALAAARTGACTLLLTHNIETIGQMSCNPAIGGIGKGHLVRE
IDALGGAMAEAADRAGIHFRVLNRRKGPAVRATRAQADRQRYRQAIRRIVDGQPNLRIFQ
QAVADIRMQGERATSVVTEAGLTFEARTVVLTVGTFLNGRIHIGAEQHPGGRAGDPPSVR
LAARLREMAFAVGRLKTGTPPRVDGRTVDFSALEPQPGDDPRPVFSFLGDRGQHPMQRLC
HIARTTERTHDLIRANLHQAPMYTGQIEGTGPRYCPSIEDKVVRFADKTSHQVFVEPEGL
DTEELYPNGISTSLPYAVQLQVVQSLPGFADAHLTRPGYAIEYDYFDPRGLLPSLATRAV
SNLFFAGQINGTTGYEEAAAQGLIAGLNAARCARDEPPWTPGRADGYIGVLIDDLVTRGT
NEPYRMFTSRAEYRLLLREDNADLRLTPRGRELGLVDDRRWHAFGERARAIEAEQARLSS
LRVDRARRDDAELAEYLGGRPEDATLMDLLRRPQVDYQGLLARLPELAVDLPESVADQVE
IQAKYAGYIERQMDEIRRQDRFETTALPADLDYERVHGLSAEIRQTLTRFRPHTLGQAQR
IPGVTPAALSALAVHLKQRAARA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatctcttcgacgtgatcgtgatcggcggcggccacgccggcaccgaagccgcg
ctggcggccgcgcgcaccggtgcgtgcacgctgctgctgacccacaacatcgagaccatc
ggccagatgagctgcaacccggcgatcggcgggatcggcaaggggcacctggtgcgcgag
atcgatgccctcggcggcgcaatggccgaggccgcggaccgcgcagggatccatttccgg
gtactgaaccggcgcaaggggccggcggtgcgcgcaacccgggcgcaggccgaccgccag
cgctaccggcaggcgatccggcggatcgtcgacggccagccgaacctgcgcatcttccag
caggcggttgccgacatccgcatgcagggcgaacgcgcgaccagcgtggtcaccgaggcg
ggcctgaccttcgaggcaagaacggtcgtattgaccgtcggcaccttcctgaacggccgg
atccacatcggcgccgagcagcaccccggcggtcgtgccggcgaccctccgagtgtcagg
ctcgcggcgcggctgcgcgagatggcgttcgcggtcggccggctgaagaccgggacaccg
ccgcgggtcgacggacgcacggtggacttttccgcgctcgagccgcagccgggcgacgac
ccccggccggtgttctcgttcctcggcgaccgcggccagcacccgatgcagcggctgtgc
cacatcgcgcgcaccaccgagcgcacgcacgacctgatccgcgccaacctgcaccaggcc
ccgatgtacaccggccagatcgagggcaccggccctcgctactgcccgtcgatcgaggac
aaggtcgtgcgcttcgccgacaagacgagtcaccaggtgttcgtggaacccgagggcctc
gataccgaggagctgtacccgaacgggatttccaccagcctgccctatgcggtgcaactc
caggtggtgcaaagcctgccgggattcgccgacgcccacctgacccgcccgggctacgcg
atcgaatacgactatttcgacccgcgcggcctgctgccgtcgctggccacacgcgccgtc
tcgaacctgttcttcgctgggcagatcaacggcaccaccggatacgaggaggccgcggcg
cagggcctgatcgccggactgaacgcggcacgctgcgcgcgcgacgagccgccgtggacg
cccggccgcgccgacggctacatcggcgtgctgatcgacgacctggtgacccggggcacc
aacgagccgtaccggatgttcacctcgcgcgccgagtaccggctgctgctgcgcgaggac
aacgccgatttgcgcctgacgccgcgcgggcgcgaactgggcctggtcgacgatcgccgc
tggcacgcgttcggcgaacgggcgcgggcgatcgaggcggaacaggcgcgtctgtcctcg
ctgcgcgtcgaccgcgcgcggcgcgacgatgcggagctggccgagtatctgggcggacgc
cccgaggatgcgacgctgatggatctgctgcgccggccgcaagtggactaccagggcctg
ctcgcgcggcttccggaactcgcggtggacctccccgagtcggtcgccgaccaggtcgag
atccaggccaagtacgcgggctacatcgagcgccagatggacgagattcggcggcaggat
cgcttcgagaccaccgcgctgccggcggatctcgactacgagcgcgtccacgggctgtcc
gccgagatccggcagacgctgacccgattccgaccgcacacgctgggtcaggcccagcgc
attcccggggtcacgccggcggcgctgtcggcgctggccgttcatctgaagcagcgcgcc
gcccgtgcctga
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