Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_0424
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Entry
Tthe_0424 CDS
T01299
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tthe_0424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttm03021
]
Tthe_0424
03400 DNA repair and recombination proteins [BR:
ttm03400
]
Tthe_0424
Enzymes [BR:
ttm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tthe_0424
Transcription machinery [BR:
ttm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tthe_0424
DNA repair and recombination proteins [BR:
ttm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tthe_0424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
ADL67993
UniProt:
D9TRU6
LinkDB
All DBs
Position
417117..420830
Genome browser
AA seq
1237 aa
AA seq
DB search
MLHPVDAGYKKRMSFARIEEVLEMPNLIEVQKNSYKWFLEEGLREVFRDISPIESFTGNL
SLEFLDYKLDDNPKYSVEECKDRDTTYAAPMKVKVRLTNRDTGEIKESEVFMGDFPLMTD
KGTFIINGAERVIVSQLVRSPGVYYEQQFDKLGKKLFFATVIPNRGAWLEYEEDSNDIFS
VRIDRTRKVPITVFLRALGYGTDAQILDLFGEDERIKATLDKDTTKSEEEGLLEVYKRLR
PGEPPTVDSAKSLLYSLFFDPKRYDLAYVGRYKFNKKLALSSRLTNQKAATNIANPITGE
IIVEEGQRISRETAKKIQDCGINVVEVLVEGRPIKVIGNNTVDINEYPLPFDVSDLNIKE
KVQLGVLKEILSNFTNEDEIKNEIKRRMDELIPKHITKDDIIASINYNLNLSFGIGFVDD
IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVSEITAQNLINIRPVVAAIKE
FFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGMEVRDVHHTHYSRMCPIETP
EGPNIGLIGSLATYARINEYGFIEAPYRKVDKATGRVLNEIVYMTADVEDEYVIAQADEP
LDEENRFVNERVTVRSKDDILSVPREEVDFMDVSPKQVVSVATAMIPFLENDDANRALMG
SNMQRQAVPLLVPQAPIVGTGIEYKAARDSGVVNIAKNSGVVERVTADKIVIRTDDGRRD
EYELLKFKRSNQGTCINCRPIVNEGDRVEKGQVISDGPSTELGEIALGRNVLVGFMPWEG
YNYEDAILISEELVKDDALTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALKDLDERG
IIRIGAEVTAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEGGIVV
DVKVYTRENGDELPPGVNEMVRVFIAQKRKISVGDKMAGRHGNKGVVSRILPVEDMPFLP
DGTPLQICLNPLGVPSRMNIGQVLEVHLGLAAKALGWYMATPVFDGAHEEDIQELLEKAG
FSPDGKIQLYDGRTGEPFDHPVTVGYMYMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDITGRVKTYESIVKGENIPEPGVPESF
KVLVKELQSLCLDVKVLTEDNQEVALKEFEDEDDDDISEDTININIEGREDAPEEVNYGE
EFNEDYDEDKDSLDDLNFEPSDIDFGDSDSFDDDYDI
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgttacatcctgttgatgccggctataagaagcgtatgagctttgcaaggattgaagaa
gtcttggaaatgcctaaccttattgaggtgcaaaaaaattcgtacaagtggtttcttgaa
gaaggtttaagggaagttttccgagatatttctccaattgagagctttaccggcaatttg
tctttggaatttcttgactataagcttgatgacaatcctaaatactctgtagaggagtgc
aaagatagagacacgacatatgctgcacctatgaaagtaaaagtaagactgactaatcgg
gatacaggagaaatcaaggaatcggaagttttcatgggtgattttcctttgatgacagat
aaaggcaccttcataataaatggtgcagaacgtgttattgtaagccaattggtgaggtcg
ccaggcgtatattacgaacaacagtttgataaattagggaagaaactcttttttgcaact
gttatccccaatagaggagcttggcttgaatacgaagaagattctaatgatattttttct
gtaagaatagataggacaaggaaagttccaattactgtatttttaagagcgctgggctat
ggaacagatgctcagattctcgatctttttggggaagatgaaaggataaaagctacactt
gacaaagatactacgaaatctgaagaagaaggcttgcttgaagtctataaaagattgaga
cccggtgagcctcctacagttgacagtgctaaaagccttttgtattctttgttttttgat
ccaaaaagatatgatcttgcttatgttggacgctataaattcaacaaaaaacttgcatta
agttctagattgacaaatcaaaaggcagctacaaatattgctaatcctataacaggtgaa
attatagttgaagaggggcaaagaatatcaagagagacggctaaaaaaatacaagattgt
ggtataaatgtagttgaagtgctagtagaaggaagaccaataaaggttattggcaataat
actgttgatattaacgaataccctcttccttttgacgtttctgatttaaacattaaggaa
aaagttcaattaggagttttaaaagaaatacttagtaattttacaaatgaggatgaaata
aaaaatgaaataaaacgcagaatggatgaattgatacctaagcatataactaaagatgat
ataattgcttctataaattacaatttgaatctttcatttggaataggatttgtagatgat
attgatcaccttggaaatagaaggctgagatctgttggcgaattgcttcaaaatcagttt
agaattggcctatcaagaatggaaagagtagttagagaaagaatgacaatacaggatgtc
agtgagataactgctcaaaatttgataaacataaggcctgttgttgctgcaattaaagag
ttttttggaagttcacagctttcacagtttatggatcagactaatccccttgcagagctg
acacataaaagaagattaagtgcattaggtccaggaggactgagccgtgagagagccgga
atggaggttagggatgttcatcatacacattacagcaggatgtgccctatagaaacgcct
gaaggtccaaacataggacttattggttcccttgctacatatgcacggataaacgaatat
ggatttattgaagctccgtacagaaaagttgataaagctacaggtagagttctcaatgaa
attgtctatatgactgcagatgtagaagatgaatatgtaatagcgcaggcagacgaaccc
cttgacgaggaaaatagatttgtaaatgaaagagttacagtccgttcaaaagatgatata
ttatcagtgccgagagaagaagtagattttatggatgtttcacctaagcaagtggtgtct
gttgcaacggctatgattcccttccttgaaaatgatgatgctaacagagcattgatgggg
tcaaacatgcaaagacaagctgttccacttcttgtgccacaggctcctattgttggaact
ggtatcgaatataaagctgcgagagattcgggtgttgtgaatattgcaaaaaatagcggt
gtagtagagagggtaactgcagataaaatagtgataagaacagatgacgggagacgtgac
gaatacgagctgcttaaatttaagagatccaatcagggaacttgcataaactgtaggcct
atagtaaatgaaggagatcgagttgaaaaaggacaggttataagtgatggtccttcaact
gagttaggcgaaattgcccttgggcgaaatgtgcttgttgggttcatgccgtgggaaggt
tataactacgaagatgcaattttaattagtgaagagcttgtgaaagatgatgctcttacg
tctattcacattgaagaatatgaatcggaagctagagacacaaaattaggacctgaagag
ataacgagagatataccaaatgttggtgaagaggcattaaaagaccttgatgaacgtgga
atcatacgtattggtgcagaagttacagcaggtgatattcttgttggaaaggtaacacca
aaaggtgaaacggaactgactgctgaggaaagacttttaagggccatatttggagaaaaa
gcaagggaagttagagatacatccctaagagtaccacatggtgaaggtggaatagtagta
gacgtcaaagtatatacgagagaaaatggtgatgagttgccacctggagtaaatgaaatg
gttagggtgtttatcgctcagaaaaggaaaatatctgttggtgacaagatggcaggtagg
cacggaaataagggtgttgtttcaaggatacttccggttgaagatatgcctttcctgcct
gatggtacgccactgcagatttgcttgaatcctcttggagttccttctcgtatgaatata
ggtcaggtactggaagttcacttaggacttgcagcaaaagctttaggttggtatatggct
acaccagttttcgatggagctcatgaggaagatatacaagagctacttgaaaaagcaggg
ttctcaccggatggaaagattcaactgtatgacggaaggactggtgagccatttgaccat
ccagttacggttgggtacatgtacatgctaaagttacaccatcttgtagatgacaaaatg
catgcaagatctacaggaccgtattcattggttacacagcagccacttggtggtaaagca
caatttggtggtcagagatttggtgagatggaagtatgggcacttgaagcatatggtgca
gcacatactttacaagagatacttaccgttaaatctgatgatataacaggtcgtgtaaaa
acctatgaatctatagttaaaggtgaaaatataccagaacctggtgttccagaatcgttt
aaggttctggtaaaggaattgcaaagtctttgccttgatgtgaaagtattgactgaagat
aatcaggaagtagcattaaaagaatttgaagatgaagatgatgatgatatttcagaagat
acaataaatataaatatcgagggaagagaagatgcaccggaagaagtaaattatggtgaa
gaatttaatgaagattacgatgaagataaagacagcttagatgatttaaactttgaacct
agtgatatagattttggtgatagcgacagctttgatgatgattatgatatataa
DBGET
integrated database retrieval system
