Thermus thermophilus SG0.5JP17-16: Ththe16_1834
Help
Entry
Ththe16_1834 CDS
T01867
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tts
Thermus thermophilus SG0.5JP17-16
Pathway
tts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ththe16_1834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tts03019
]
Ththe16_1834
Messenger RNA biogenesis [BR:
tts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ththe16_1834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_PNO1_2nd
DUF1664
KH_KhpA-B
ATP-synt_B
KH_NusA_2nd
Propep_M14
KH_2
Motif
Other DBs
NCBI-ProteinID:
AEG34228
UniProt:
F6DFH0
LinkDB
All DBs
Position
complement(1733934..1735658)
Genome browser
AA seq
574 aa
AA seq
DB search
MSLLDLVLLLLVLGLGGGLLLRRKGEDRSAQEARELLEAARREAREVLEAARKEAREILE
AARQEAKALRQEAEARAKAQREEVEAELRRRLEAAEAEAKKRLEEAGERLKAEREELRAE
RERLRSLQEELKEERERLKAEREELRREGERLAKRAEALDARVARLEEAEAELVRKEEAL
KAEARALEERLKEVERKLYEVAGLTPEEARRLILERLDQELEEEKAQKVRAALERARLEA
RREAQKILAQAMQRQASETAAQLAVTVVPIPSDAMKGRIIGREGRNIRAFEALTGVDLII
DDTPDAVLLSSFNPIRREIARMALEELLKDGRIHPSRIEEVVEKAKQEMKTFIYERGEEA
ALEAGVVGLKPGLIQLLGRLHFRFSYGQNVLKHSVQVAHLAGIMAAELGLDAALARRAGL
LHDIGKSVDREVEGSHVEIGIALARRFGEPMEVVDAIAHHHDPDNAETLYAVLVAAADAL
SAARPGARRESLEEYLQRLEALERIALSFPGVETAFAVQAGREVRVIVKPEKISDAKATL
LAREIASRIEKEMNYPGQVQVTVVRETRAVEYAR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttctggacctggttcttctgctcctggtcctggggcttggggggggtctcctc
cttaggcggaagggggaggaccgctcggcccaggaggcccgggagctcctggaggcggca
aggcgggaggcccgggaggtcctggaggccgcgcggaaggaggcccgggaaatcctggag
gccgcccgccaggaggccaaggccctgcgccaggaggcggaggcccgggccaaggcccag
cgggaggaggtggaggcggagctcaggcgccgcctcgaggccgccgaggccgaggccaaa
aagcgcctggaggaggcgggggaacgcctcaaggcggagcgggaggagcttcgcgccgag
cgggagcgcctgaggtccctccaggaggagctcaaggaggagcgggagcgcctcaaggct
gagcgggaggagctccgccgggagggggagcggctcgccaagcgggccgaagccctggac
gccagggtggcgcggctggaggaggcggaggcggagcttgtccgcaaggaggaggcgctc
aaggcggaggccagggccctggaggagcggcttaaggaggtggagcggaaactttacgag
gtggcgggcctcacccctgaggaggcccgcaggctcatcctggagcgcctggaccaggag
ctggaggaggagaaggcccaaaaggtgcgggccgccttggagcgggcccgcctcgaggcc
cggcgggaggcgcagaagatcctggcccaggccatgcagcgccaggcctcggaaaccgca
gcccagctcgccgtcaccgtggtgcccatcccctccgacgccatgaaggggcggatcatc
ggccgggaggggcggaacatccgcgcctttgaggccctgacgggggtggacctcatcatt
gacgacaccccggacgccgtcctcctctcctctttcaaccccatccgccgcgagatcgcc
cgcatggccctggaggagctcttgaaggacggccgcatccacccaagccgcattgaggag
gtggtggaaaaggccaagcaggagatgaagaccttcatttacgagaggggggaggaggcc
gccttagaggcgggggtggtgggcctgaaacccggcctcatccagcttttggggcggctc
cacttccgcttcagctacggccagaacgtcctcaagcactcggtccaggtggcccacctc
gccgggatcatggcggcggagctcggcctagacgccgccctcgcccggagagccgggctc
ctccacgacatcggcaagagcgtggaccgggaggtggagggaagccacgtggagatcggc
atcgccttggcgcggcgcttcggggagcccatggaggtggtggacgccatcgcccaccac
cacgaccccgacaacgccgagaccctctacgccgtcttggtggccgcggccgacgccctc
tcggcggcgcggcccggggcgaggcgggagagcctcgaggagtacctccagcgcctggag
gccctggagcgcatcgccctctccttcccgggggtggagacggccttcgccgtgcaggcg
ggccgggaggtgcgggtcatcgtcaagccggagaagatcagtgatgccaaggccaccctc
ctggcccgggagatcgccagccgcattgagaaggagatgaactacccgggccaggtccag
gtgaccgtggtgcgggagacccgggcggtggagtacgctaggtga
DBGET
integrated database retrieval system
