Thermothielavioides terrestris: THITE_115927
Help
Entry
THITE_115927 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THITE_115927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_115927
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
THITE_115927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
SET
Motif
Other DBs
NCBI-GeneID:
11517638
NCBI-ProteinID:
XP_003650664
JGI:
Thite2_115927
UniProt:
G2QSP5
LinkDB
All DBs
Position
1:complement(join(8214107..8214777,8214899..8215165,8215475..8217257,8217309..8218204,8218423..8218447,8218736..8218966))
Genome browser
AA seq
1290 aa
AA seq
DB search
MCFEWKNRFACGHVGFNKVERCERLGAGCFGPDGSERFVDVDAPCYDCRARQLRLQQQQH
EALATDDPFRRRRRKSGGVTDYGPHRMAGRKRSAPADSSPRTTRSSARVAAQNAVSRSSP
RRTTAGRDDAVPDVYREMLAAARAEMSAHDPVVSQRPLKRKRPGEGRPARAEPPTATATA
AKSGDFGNRNPENLASDDASDDGLVEFEDVAVPTPAVQTILRESDDEEDDEDDDEIDFED
VAIEPVSSSASGVVGGPQGLNLDLSAHMASMAPRRASRRKAISKDEKERRILIHKMHLAC
LLAHVELRNRWCNDRDVQDALRPLLPQKTVAALIPRASLNQFGRTESLRKGLQEAKDLFK
LKYSITERGLRRALWAEDEEQLKDYQLPDDIESTLDKSDFLEAAKTLQGSRDVGAQLFCA
MLRSVGVETRLVCSLQPLSFAPGAPSMPKQRKSQTPQKQPSRAELYAAAVAKHETKLPEF
QAGATTPSPRRRLGHPHAAAFHIPSVSGPSHSQSASAPDTPRKIRGESPFPVYWVEVLDV
AHQKWHPVDPLVTCTQWKPRALEPPASDINNCLSYVIAFEADSSARDVTRRYAKAYNSKT
RKLRIDGAVSTTTTTTTTTTTTATPGNPTPLDNARWYHRLLRRYARPVPTDLDQIERNEL
AAEEAREPMPRNVADFKDHPVYALERHLRRHEVLAPGAQAIGTVSAGARAPLERIYRRAD
VKVARSRERWYRLGRVVRDGEEPVKSLVRKRRGGRVKIGGDEEEEEEDDDDPDRVGLFGD
AAPGSVPLYLLEQTEAYVPPPVVNGRVPKNKFGNLDLYVPSMVPRGGVHVAHERAAQAAF
ILGVDYAPALTGFEFRGRHGTAVLNGVVVPEEAAEAVRAVIQGLEDMEAEEEQERRTRTA
LRMWSRFLKGLRIRERIWAGVDEAEEAEAEAERRREAEGKGKGKEPEGQDVGMADAMSDE
EVGGGGFFVPDEEDDADDDRTPFLKNREQMGSKAKTQPSQPPVPANWPAHIRYLTRASYS
PYLTPAHLRALRTRPAADPSDPVLEIPRNLKPGPCPSVRIVPIIDPNHPAYGQAGLFATR
DLAPGELILPYLGEVHVGTPPFGRQPSGSGSDDRDKRDNMYCNRGGAGAGAGADDYDYAA
SDYDLWLDRDADLAVDAARAGNEARFINDYRGVPLPQPQPQPQPRLEGLGRAQGRDGGRS
GGRPQRRRPNAEFRVVWDPRVGERCMAVFVLPAGKRAVGRARTVGIARGEEVLVSYGKGF
WQGRKGVGEGDEEEEGGLVEEGEGGPADVK
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcgagtggaagaaccggttcgcctgcggccacgtcggcttcaacaaggtcgag
cgctgcgagcgcctcggcgccggctgcttcggcccggacggctccgagcggttcgtcgac
gtcgacgcgccgtgctacgactgccgcgcgcgccagctgcggctgcagcagcagcagcac
gaggcgctggccacggatgatccgttccggcggcggcggcggaagagcgggggagtgacg
gattatggtccccatcggatggcgggcagaaagcgcagtgcgcctgccgacagcagccca
aggaccacgcgctccagcgcgagggtcgcagcccaaaatgccgtctcgcggtccagcccg
aggcggacaaccgcaggcagagatgacgccgtgcctgacgtgtaccgcgagatgctggcc
gccgcgagggccgagatgtccgcccatgatcccgtggtctcccagcggcccttgaaacgc
aagcggccgggggagggacgccccgcgcgagccgaaccgccaacggcgacggcgactgct
gctaagtccggcgacttcggcaatcgaaatcccgagaacctggcctctgatgatgcctcc
gatgacggcctcgtcgagttcgaggatgtcgccgtgccgacgcccgcagtccagacgatc
ctgcgggagtcggacgacgaagaggacgacgaggacgacgacgaaatcgacttcgaagac
gtagcaattgagcccgtatcgtcgtcagcttcgggggttgtcggagggccccagggactg
aacctggacctatccgcccacatggcgtccatggccccgcgccgtgcgtctcgtcgcaag
gccatcagtaaagatgagaaggagcgccgcatcctgatccacaaaatgcatctggcctgt
cttcttgcacatgttgaactcagaaaccggtggtgcaatgaccgcgatgtccaggacgcc
ctgcggccgctgctgccccagaagacggtggccgccttaatcccccgagccagtctcaac
caattcgggcgcaccgagtcgttgaggaaaggtcttcaggaggcgaaagacctgttcaag
ctgaaatattccatcaccgagcgcgggttgcggagggccctgtgggctgaggatgaagaa
cagctcaaagattaccaactccccgacgacatcgaatccaccctagacaagagtgacttc
ctcgaggcggccaagacgctccagggctcccgcgacgtgggtgctcagctgttctgtgct
atgctccgatccgtcggagtcgagacccgactggtctgctcgctgcagcctctgtccttc
gcgcccggcgccccttcaatgccgaagcaacggaaatctcaaacaccccagaaacagccc
tccagggccgaactatacgcagcagcagtggcaaaacacgagacaaagcttcccgagttc
caagccggcgccacaacgccttctccccgccgacgactcggccacccgcacgccgccgcc
ttccacatcccatccgtgagtggaccctcacattctcagtctgcgtccgcgcccgacact
cccaggaagatccgcggcgagtctcccttcccggtgtattgggtcgaagtcctcgacgtc
gcccaccaaaagtggcacccggtcgaccctcttgtcacctgcacgcagtggaaaccgcgc
gcgctcgaaccgcccgcatccgacatcaacaactgcctgagctacgtaatcgccttcgaa
gccgactccagcgcgcgcgacgtcacccgccgctacgccaaggcgtacaactctaagacc
cgcaagctgcgcatcgacggcgccgtcagcaccaccaccaccaccaccacaacaacaaca
acaacagcaaccccgggaaacccaacacccctcgacaacgcccgctggtaccaccgcctg
ctgcggcgctacgcccgccccgtgccgaccgacctggaccagatcgagcgcaacgagctg
gccgccgaggaggcgcgcgagccgatgccgcgcaacgtggccgacttcaaggaccacccg
gtctacgcgctggagcgccacctgcgccgccacgaggtgctggcgccgggcgcgcaggcc
atcggcaccgtcagcgcgggcgcccgcgcgccgctcgagcgcatctatcgccgcgccgac
gtcaaggtggcgcgctcgagggagcgttggtatcgcttgggccgggtggttcgggacggg
gaggagccggtcaagagtctggtgaggaagaggagaggaggccgggtaaaaataggtggg
gatgaggaggaggaagaagaagatgatgatgatccggatagggtcgggttgttcggcgat
gccgcgccggggagtgtgccgctgtacctgctggagcagaccgaggcgtatgtgccgccg
ccggtggtgaacgggcgggtgccgaagaacaagttcgggaatctggacctgtacgtgccg
agcatggtcccccgcggcggcgtgcatgtcgcgcacgagcgggcggcgcaggcggcgttc
atcttgggcgtggactatgcgcctgccctgaccgggtttgagttcaggggcaggcacggc
acggcggtgctgaatggcgtggtggtcccggaggaggccgccgaggcggtgcgcgccgtg
attcaggggctggaggatatggaggccgaggaggagcaggagaggaggacgaggacggcg
ctgcgcatgtggagccgcttcttgaaggggctgaggatcagggagagaatctgggccggg
gtggatgaggcggaggaggcggaggcggaagccgagaggcggcgggaagcagaaggcaaa
gggaaggggaaagagccggaagggcaggatgtcggcatggcagatgccatgagtgacgag
gaggtcggaggtggagggttctttgtgccggatgaggaggacgacgcggatgacgacagg
accccatttttgaagaaccgagagcaaatgggctccaaagcgaagacccaaccctcgcaa
ccaccagtgcccgccaactggccggcccacatccgctacctcacacgggcctcttactca
ccgtatcttaccccggcccacctccgcgccctccgcacccggccggcggcagacccatcc
gacccggtcttggagatcccccgcaatctcaagccgggcccgtgcccgtcggtgcgcatc
gtcccgatcatcgacccgaaccaccccgcctacggccaagcaggcctcttcgcgacccgc
gacctcgcgccgggcgagttgatcctgccctacctgggcgaggtgcacgtcggcacgccg
ccgttcggccgccagccatcgggctcgggctccgatgaccgcgacaaacgcgacaacatg
tactgcaaccgtggcggcgccggcgccggcgccggcgccgacgactacgactacgccgcg
tcggactacgacctgtggctggaccgcgacgccgacctggccgtcgacgcggcgcgcgcg
ggcaacgaggcgcgcttcatcaacgactaccgcggcgtgcccctgccgcagccgcagccg
cagccgcagccgcggttggagggtctaggccgggcgcagggccgggacgggggccggagc
ggggggaggccgcagcggcgcaggccgaacgccgagttcagggtcgtctgggatccgcgc
gtcggcgagcgctgcatggctgtgttcgtgctgcctgcgggcaagagggccgtcggtagg
gccaggacggtcgggattgcgcgcggcgaggaggtgttggttagttatgggaaggggttt
tggcagggccggaagggggtgggagagggcgacgaggaggaggaaggggggctggttgag
gaaggggaagggggcccggcggatgtaaagtag
DBGET
integrated database retrieval system
