Thermothielavioides terrestris: THITE_2110243
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Entry
THITE_2110243 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THITE_2110243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2110243
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
THITE_2110243
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
THITE_2110243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
11519152
NCBI-ProteinID:
XP_003650607
JGI:
Thite2_2110243
UniProt:
G2QS82
LinkDB
All DBs
Position
1:complement(join(8009194..8009235,8009294..8015241,8015325..8015649,8015715..8015975))
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AA seq
2191 aa
AA seq
DB search
MVPPPRPGTFSPSPAAQAIHTGAASHSPHPSHAGALSAAASPSTSSPTGSNSLTKLVVAQ
VYLLLSTIKEDRDDPRKWESQIESLRKLLDEHGMDVFTRYFARLVAANAAQIFPGLNRPG
ANPGNYHLLVAEMRKLSRDFSQARKIAESIETGTEDIFRDFDLSTFMEHFQLDALEKTLL
ALAFKLGPRIDLKAKADAILSTNFPTFVNILSRPNGDHADLEPDFVAELLDRFVQVHPPN
FNAAAKRELEHRVQSRYAQSPDSKPPPSQVLAALDLVRMLADKPPNALALYIHRTGAAFT
ADDQTCTGYLQNRPPNVHLSEEQVSVALMYTTISQTPRHNPSVLVTALRRILPEGFRWQD
VVSYFDHSGARVTSAQFLRLYNALLPIAQEDSDKLNIQRLWGGEWENPETQLSFICAFAS
LKPEQLDATTIPDLKPTFTVQEYAQSPQSIRETAAYAVKHPLVSEAALSAVFNVALHSMH
ASQSIEAKRLFQDVVVPNLAIFVVSAFGVPKPWPAMAEDTLVSLFDNFLPRTPDADFVMD
SLWRRDKEWVKQRLSDAHVLKPMSLPLIFEHAVRQNWLDELVYLPNAFGVDLASLAHAEG
YLDLQQWARKNADRSTEMARLLFQFLVVKASLEMQYQRPPEGQPPVKTTTTLQVRTVHAL
LQILEEFMPKTPVHDLIMAQRTCITAYPRLINYGEGFDDIIDANGRDGNALPLAANAKME
EHYKKMYGDEIQVRDVVEILERYKRSRDPLDQDIFACMIHGLFDEYAHYVDYPLEALATT
AVLFGGIISHKLISDLPLQIGLGMILEAVRDHHPDEPMFKFGLQALMQLFGRFREWPGFC
KQLLQIPGLQGTEAWNKAEEVIREHDEELARSRNGGVIGHSGMLGNDKLANGSLDDGLGS
EQHPPPFTSVNVDPPPPGVVYEDPSEEAQGKIQFVLNNLTDTTLQSMFKEIRDMLEAKHQ
QWFASHLVEERAKMQPNYHHVYLELVKQFEDKALWAEVQRETYISISRMLNSELTMQNST
ERSHLKNLGGWLGLLTLARDKPIKHKNIAFKQLLIEAHDTKRLIVVIPFVCKVLIQGASS
NVFRPPNPWLMDIIHLLIELYHNAELKLNLKFEIEVLCKGLNLDHKAIEPSGEILNRAPV
EEVGDIMGPEALENFENLSLNGMPGVGSALSAHPAFAIPDLGPSLSVPQTEVISAAKLHE
ILRQALTRALQDIIQPVVDRSVTIAAISTHQMIRKDFATEPDENRVRTAAINMVKSTAGN
LALVTSKDPLRANLTNYLRNLSADLPQGLPEGIIMLCVNSNLDLASSVIEKCAEERAVPE
IEDLIEGELEARRRHRLQRPSEPYIDHGLSRWAMTIPHPFKLQPSLGGLNAEQLAIYDDF
ARQSRVNAAAATPSQGPSASDARSMANEALSDQFNAVSTMPTPAETPSMPHLGVQLQHYP
QAHVGLTNGRQGAMSQIDSRSVAERVNKLLEQLASAATNSSEEHFNEVPRSHPVLDLVDA
LIQLIIKTQQTSEEFTVYAANQIAQLLFRQPESTLLLECLVHVLETLRKVAGPVISEQIR
QLFHQQPGELFLNVPLITALLGTDLLDWRSIDAATAKVLQQRKEGSIDFLERLMDLTLLN
DAPLALYADFVRSLEEAWSWIMEDPDVPAGARFKSKVLAPPPELPAGLSQDEIRAIQLDQ
MDYVFDEWIHLCNNRFATERSSMIFVQQMHSRGMVNSSEDLLLFTRQALDRSVERFEQCL
QSGGGLAEGYQAVDALVKMIIIFVKAHHDSEDQDRSAGVAFLDSILSLGVLVLNNHHVKR
GEAFNQRVFFRFFSAILHEVADLASHLPENDYQQIILRFATRLYDLRPSLYPGFVYGWTE
LLTHRCFLPVILRLPGEVGWAPLTKLLTQLLSYLGDLLKPLTVSNMAKGLYHAVLRLLAI
LHHDFPDYVAATHVQLCESLPPHVTQLNNFILSATPPAFTKSADPFQLGLKVDRIPEMKE
APPTTFDSAGVLRETGLFDILEQALQNGPSEDAIAQINHAINKADGEDSTFGYVPVGVNR
RLIDAVVAQFARFAVNRAASKSDGSVFVPGASDVKTLHMLVTEVSPEARYYLVTSMVNEL
RFPNASTSYFSQALLEIFGQDMSDPEETDIRQQIVRILLERLVGYWPQPWGLMITTLELI
KNDKYHFFDLPFIKATPEVAERFADILRAAS
NT seq
6576 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccacccagaccgggaaccttctcgccgagcccagccgcgcaagccatccac
actggcgccgcgtcccattccccccatccctctcacgccggtgcgctgagtgcggctgcc
agccccagtacgagcagccccactgggtcaaactccctgaccaagcttgttgtcgcccag
gtctacctgctgctgagcaccatcaaggaggatcgggacgatcctcgtaagtgggagtca
cagatcgagtctctgcgcaagctgctcgatgagcacggcatggatgtctttacgagatac
ttcgcgcgactggtggccgcaaatgccgcccagatattccccggcctcaacaggccggga
gcaaatcccggcaattaccatctcctcgtcgccgagatgcggaagttgtctcgcgacttc
tcccaggccaggaagatcgccgaatctatcgagaccggcaccgaggatatctttcgtgac
ttcgacctgtccacgtttatggagcatttccagttggacgctctcgagaagaccctgctg
gctctcgctttcaagcttgggcccaggatcgacttgaaggccaaagccgatgctatccta
tcgacaaatttcccgacgttcgtcaatatccttagccggccaaatggagaccacgccgat
ctcgagcctgacttcgtcgccgaactcctcgaccgcttcgttcaggtccacccgccaaac
tttaatgctgccgcgaagcgcgagctggaacacagggtgcagtcgagatacgcccagtcc
ccggattccaagccgccgccctcgcaggtgttggccgctctcgacctggtgcggatgctc
gccgacaaaccacctaacgcccttgccctttacatccatcggaccggcgccgccttcacc
gcggacgaccagacatgtacgggctacctgcaaaatcggccgcctaatgtccatctcagc
gaggaacaggtgtccgtggccttgatgtacacgaccatcagccagacccctcgccacaat
ccttctgtcctcgttaccgccctcaggcgaattctgcccgagggcttcaggtggcaagat
gtggtgtcgtacttcgaccacagcggcgcccgggtcacgtcggcccagttcctccgccta
tacaacgcgcttctgcccatagcacaggaggacagcgacaagctcaacatccagcgcctg
tggggcggcgagtgggagaatcccgaaacccagctctcgttcatctgcgccttcgcatcc
ctcaagcctgagcagctggatgcgaccaccatacctgacctaaagccaacctttacggtg
caggagtacgcccagtctccccagtcgatacgggagacggcagcatatgccgtcaagcac
cccctggtttccgaggctgcgctgtctgccgtcttcaacgttgcgctgcactcgatgcac
gcctcgcagagcatcgaagccaagcggctcttccaagacgtggttgtccccaatctggcc
atctttgtggtctcggcattcggcgtgccgaagccttggccagccatggccgaggatacg
ctggtctccctgttcgacaacttccttcccaggacgcccgatgccgacttcgtcatggac
agcctttggaggagggacaaggagtgggttaaacagcggctcagcgatgcgcacgtgctg
aaacccatgagcttgccgctcatatttgagcacgcggtccggcagaactggctcgacgag
ctcgtttacctcccgaatgcgtttggcgtcgacctggcctcgctggcgcacgccgaagga
tacctcgacttgcagcaatgggcgcggaagaacgctgaccgcagcaccgagatggccagg
ctacttttccagttcctggtcgtcaaggcaagcctcgaaatgcagtaccagcgccctccg
gagggccaaccgcccgtcaagacgacgacaaccctgcaagtcaggaccgtccatgctctg
ctccagatcttagaagagttcatgcccaagacgccggtgcacgacctgatcatggctcag
cggacatgcatcacggcgtacccgaggcttatcaactacggcgaaggttttgacgacatc
atcgacgcgaacgggcgcgacggcaacgctctgccgctggccgccaacgccaaaatggaa
gagcattacaagaagatgtacggcgacgagatccaggttcgcgacgtggtggagatcctg
gagcgatacaagcggtcccgcgatcccctggatcaggatatttttgcctgcatgatccac
ggcctgttcgacgagtacgcgcattacgtcgattatcccctcgaggcactggctacaacc
gcggtcctcttcggaggcataatatctcacaagctcatctcggaccttccgctgcagatc
gggttgggcatgatcctggaggccgtcagagaccatcatcccgatgagcccatgttcaaa
ttcggcctgcaagctctcatgcagctcttcgggcgcttccgagagtggcctggcttttgc
aaacagctcctccagattcccggtctgcaagggacggaagcgtggaacaaggccgaggaa
gtcattcgagagcacgacgaggagcttgcgcgctctcgtaacggcggcgtcatcggtcac
tcggggatgctcggcaacgacaagctggccaacggcagcctggatgatggcttgggatcg
gagcagcacccgcctccctttacctcggtgaacgtggacccgcccccgccaggtgtcgtc
tacgaagaccccagcgaagaggcccaagggaagatccagttcgtgctcaacaaccttacc
gacacgacactacaatccatgtttaaggagatccgtgacatgttggaggccaagcatcag
cagtggttcgccagtcatctggtcgaggagcgcgccaagatgcagcctaattaccatcac
gtctacctcgagctcgtcaagcaattcgaggataaggcgctgtgggcggaggtccaacgg
gagacctacatcagcatctcgcgcatgctcaattcggagctgacgatgcagaactcgacc
gagaggagccacctgaagaacctcggcggctggctcggactcttgaccctcgcccgcgat
aagccgatcaagcataagaacatcgcgttcaagcagctccttattgaggcgcacgacacg
aagcgcctcattgtggtcatcccttttgtgtgcaaggttctcatccagggtgcctcctcc
aacgtcttcaggccgcccaatccttggctgatggatattatccatctgctgattgagctg
taccacaacgccgagctgaagctgaacctcaagtttgagatcgaggtgctctgcaagggt
ctcaatctggatcataaagccatcgagccctccggcgagatcctcaaccgcgctcctgtg
gaggaagtgggcgacatcatgggcccggaggcgctggagaatttcgaaaacctgtctctc
aacgggatgcctggcgtcggcagtgcgctttcggcgcacccggcgttcgcgatccccgac
ctgggcccaagcctgtcggttccgcagaccgaggtcatcagcgccgccaagctgcacgag
atcctccgccaggccttgacgcgtgcgctgcaggacatcatccagcccgtggtcgaccgg
tcggtcaccatcgctgccatctcgacacaccagatgatccgcaaggacttcgctaccgaa
cccgacgagaatcgggtgcgtacggcggccatcaacatggtgaaatccaccgctggtaat
ctggcgctcgtaacttcaaaggatccgctgcgtgcaaaccttaccaactacctgcggaac
ctgtccgccgaccttccccagggcctaccggagggcatcatcatgttgtgtgtcaactct
aaccttgatctggcctcgagcgtcatcgagaaatgcgcggaggagcgtgctgtaccggaa
attgaggatctgatcgagggcgagctcgaggcccggcgccgtcacaggctccagcggcca
tctgagccttacatcgaccacggactgagccgctgggcgatgacgatccctcatcccttc
aagctccagcccagccttggcggtctcaacgcagagcagctggcgatttacgacgacttt
gcccgtcagtccagggtgaatgctgctgccgccacgccctcgcaaggcccgtctgcctcg
gatgctagatcgatggcaaacgaggctctcagcgatcagttcaacgctgtcagcactatg
ccgacccccgccgagaccccgtcgatgccccatctgggcgtgcagcttcagcactaccct
caggctcacgtcgggctgacgaatggccgccagggcgccatgagccagatcgactccagg
agcgttgcggagagagtcaacaagcttctggaacagctggcgtctgccgctacgaattcg
tcggaagaacatttcaacgaagtccccaggtctcacccggttctcgaccttgtcgacgcg
ctaatccaactgattatcaagacccaacagacctcggaggagttcaccgtgtatgccgcg
aaccagattgctcagcttctcttccgccagcccgagagcaccctgctgctcgagtgtctg
gtccatgttctcgagacgcttcgcaaagttgcagggccggtcatcagcgagcagatccgc
cagctcttccatcagcagcccggagagttgttcctcaacgtgcctctcattacggcgctg
ctaggaacggatcttctcgactggaggagcatcgacgcggcgacggcgaaggtgctgcag
cagcgcaaggaggggtccattgacttcctcgagcggctcatggacctcacgctccttaat
gatgctccgctcgcgctttatgcggattttgttcggagcttggaggaagcgtggtcgtgg
atcatggaggatcctgatgtacccgcaggcgcgcggttcaaatccaaagtgctggctccg
ccgccagagcttcccgccggcctgagccaggatgagatccgcgctatccaactcgatcag
atggactacgtgtttgacgagtggatccacctctgcaacaaccgtttcgcgacggagagg
tcctccatgatcttcgtgcaacagatgcactcacgtgggatggtgaacagcagcgaggac
ctgttgctgttcacacgtcaggcgctcgacaggtccgtcgaacgcttcgagcagtgcctc
cagtctggcggcggattggcggaaggctaccaggcggttgacgcgctggtcaagatgatc
atcatcttcgtcaaggctcaccacgacagcgaggatcaggatcgatcggccggcgtggcc
ttcctggactcgatcctctcgctcggcgtgttggtgctgaacaaccaccacgtcaagcgg
ggggaagccttcaaccagcgagtctttttccgtttcttctcggccattctgcacgaggtt
gcagatctggctagccatctcccggagaacgattatcagcagattatcctgcgctttgca
acacgtctctacgatctccgcccgagcctgtacccaggatttgtctatggatggacagaa
ctcctgacgcaccgttgcttcctgcccgttatccttcggctccctggcgaggttggctgg
gcgcccttgacgaagctgctgacacagctcctttcatacctcggcgatcttttgaagccc
ttgaccgtctcgaatatggcgaaggggttgtatcatgccgtgctaaggctgctggccatt
ctccaccatgacttccccgactacgtcgcggcgacccacgtgcagctgtgcgagagcctc
cccccgcatgtcacgcagctcaataacttcatcctctccgcgacgccgccggcatttact
aagtcggccgaccccttccagctgggcctcaaagtagaccggatccccgagatgaaggaa
gcgccgcccacgaccttcgactcggccggcgtgctgcgcgaaaccggtctctttgacatc
ttggagcaggcgctgcagaacggcccatccgaggatgccatcgcccagatcaaccacgcg
atcaacaaggcagatggggaggattcgacgttcggctacgtcccggtcggggtgaaccgg
cgactgattgatgctgtggttgcccagtttgcccgcttcgccgtcaaccgggcggcatcg
aagagcgacgggtccgtctttgttcccggcgcttcggacgtcaagacgctccacatgctc
gttaccgaggtgtcgcccgaagccaggtactacctggtgaccagcatggtcaacgagctc
agattccccaacgcgtcgaccagctatttcagccaggcgctcctcgagatcttcggccaa
gacatgtcggaccccgaagagacggatatccggcagcagattgtgcgcatcctgctcgag
agactggttgggtactggccgcagccgtgggggctgatgattaccacccttgagctcatc
aagaacgataagtaccacttctttgacttgccgttcatcaaagcaaccccagaggttgcc
gagcgttttgccgacatcctccgcgctgcctcataa
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integrated database retrieval system
