KEGG   Teredinibacter turnerae: TERTU_3558
Entry
TERTU_3558        CDS       T00952                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ttu  Teredinibacter turnerae
Pathway
ttu02024  Quorum sensing
ttu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ttu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TERTU_3558
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TERTU_3558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttu03019]
    TERTU_3558
   03036 Chromosome and associated proteins [BR:ttu03036]
    TERTU_3558
Messenger RNA biogenesis [BR:ttu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     TERTU_3558
Chromosome and associated proteins [BR:ttu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    TERTU_3558
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ACR13497
UniProt: C5BRH7
LinkDB
Position
complement(3940085..3940348)
AA seq 87 aa
MSKGHSLQDPYLNVLRKERIPVSIYLVNGIKLQGQVESFDQFVVLLKNTVSQMVYKHAIS
TVVPSRPVRVPMLNPESTGNDDMESGA
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcatagcttacaagacccttatttaaatgtattacgtaaagaaagaatc
ccagtttccatctatttggtcaacggcatcaagctccaaggacaagtggagtcgttcgat
cagtttgttgttttactgaaaaataccgtgagccaaatggtttacaagcacgcgatttct
acagtcgtgccttctcgtcccgtacgtgtgcctatgctgaatcccgaaagcactggcaat
gacgatatggaaagcggcgcttaa

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