Teredinibacter turnerae: TERTU_3558
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Entry
TERTU_3558 CDS
T00952
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ttu
Teredinibacter turnerae
Pathway
ttu02024
Quorum sensing
ttu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TERTU_3558
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TERTU_3558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttu03019
]
TERTU_3558
03036 Chromosome and associated proteins [BR:
ttu03036
]
TERTU_3558
Messenger RNA biogenesis [BR:
ttu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TERTU_3558
Chromosome and associated proteins [BR:
ttu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
TERTU_3558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ACR13497
UniProt:
C5BRH7
LinkDB
All DBs
Position
complement(3940085..3940348)
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AA seq
87 aa
AA seq
DB search
MSKGHSLQDPYLNVLRKERIPVSIYLVNGIKLQGQVESFDQFVVLLKNTVSQMVYKHAIS
TVVPSRPVRVPMLNPESTGNDDMESGA
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcatagcttacaagacccttatttaaatgtattacgtaaagaaagaatc
ccagtttccatctatttggtcaacggcatcaagctccaaggacaagtggagtcgttcgat
cagtttgttgttttactgaaaaataccgtgagccaaatggtttacaagcacgcgatttct
acagtcgtgccttctcgtcccgtacgtgtgcctatgctgaatcccgaaagcactggcaat
gacgatatggaaagcggcgcttaa
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