Tepidimonas taiwanensis: LCC91_04120
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Entry
LCC91_04120 CDS
T07546
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ttw
Tepidimonas taiwanensis
Pathway
ttw02024
Quorum sensing
ttw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCC91_04120 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCC91_04120 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttw03019
]
LCC91_04120 (hfq)
03036 Chromosome and associated proteins [BR:
ttw03036
]
LCC91_04120 (hfq)
Messenger RNA biogenesis [BR:
ttw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCC91_04120 (hfq)
Chromosome and associated proteins [BR:
ttw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LCC91_04120 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UBQ06293
LinkDB
All DBs
Position
893825..894079
Genome browser
AA seq
84 aa
AA seq
DB search
MSNNKGQLLQDPFLNQLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHA
ISTIVPGRPVHFTVGQPAEGPSAS
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacaacaaaggccaactcctgcaggacccgtttctgaaccagctccgtcgtgag
cacgtgccggtgtcgatctacctcgtcaacggcatcaagctgcagggccagatcgagtcc
ttcgatcagtatgtcgtgctgctgcgcaacaccgtcacccagatggtgtacaagcacgcc
atttcgaccatcgtgccgggccgtccggtgcacttcacggtcgggcagccggccgagggt
ccgtcggcatcgtga
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