Thunnus thynnus (Atlantic bluefin tuna): 137172014
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Entry
137172014 CDS
T11154
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03266
Virion - Herpesvirus
tty04081
Hormone signaling
tty04145
Phagosome
tty04148
Efferocytosis
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
tty04517
IgSF CAM signaling
tty04810
Regulation of actin cytoskeleton
tty04820
Cytoskeleton in muscle cells
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
137172014
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
137172014
04512 ECM-receptor interaction
137172014
04517 IgSF CAM signaling
137172014
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137172014
04148 Efferocytosis
137172014
09144 Cellular community - eukaryotes
04510 Focal adhesion
137172014
09142 Cell motility
04820 Cytoskeleton in muscle cells
137172014
04810 Regulation of actin cytoskeleton
137172014
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137172014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137172014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137172014
04515 Cell adhesion molecules [BR:
tty04515
]
137172014
04090 CD molecules [BR:
tty04090
]
137172014
Membrane trafficking [BR:
tty04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
137172014
Exosome [BR:
tty04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137172014
Cell adhesion molecules [BR:
tty04515
]
Integrins
Integrin beta subunits
137172014
CD molecules [BR:
tty04090
]
Proteins
137172014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
137172014
NCBI-ProteinID:
XP_067432363
LinkDB
All DBs
Position
20:complement(13415082..13436625)
Genome browser
AA seq
795 aa
AA seq
DB search
MGALPAQRILWMCVLIFIGITAVCGSNVCTSRGASTCKQCLAVHPNCAWCFQEDFGHGVA
SSSRCDLKSNLVAAGCALSDLESPTSKMQVIEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKQFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEKVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVTPNDGQC
HLNSENMYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVVQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGEFIPGLKSCSGLKIGD
TVTFSVEARARGCPKQKKKTFIIKPVGFKDALSITVTFECDCKCQTKAQPNSPKCNHGNG
TYECGICLCHPGRLGPHCECAEGDYNPTEQDRCSGPAGSGGPQSAICSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCM
SNLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFVD
NTCSRICKDEIELVDELVLHDTNAVNCTYKDEDDCVERFQYYEDASGKSILYVVKEPDCP
KGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctctcccggcgcaaaggatactgtggatgtgtgttttgatcttcataggaata
acagcagtttgcggttcaaacgtctgcacctccagaggggccagcacatgcaagcaatgt
ctggctgtgcaccccaactgtgcgtggtgcttccaagaggatttcggtcatggggttgct
agctcgtcccgttgtgatctgaagagtaacctggtggcagcgggctgtgctctgtcagat
ctggagtctccaaccagcaaaatgcaggtgatcgaggatcggcccctcagcaacaaagca
gcgggggccacacaggatgtcacccagatcaagccccagaaactccacatcaccctcagg
ccagatgatgccaagcagttcacagtgaaagtgcgtcaggttgaggactaccctgtggat
ctctactacctcatggacctctcttactccatgaatgatgacctcttccgtctgaggacg
ctgggaaagggcctggctgaggccatgaaccgcaccaccagcaacctgcgcatgggcttt
ggcgcttttgttgacaagccactttcaccttacatgtacatctcccccaaagaggctgtg
aagaacccttgctacagcataaacaccacctgtctgccccagtttggctacaagcacgtt
ctgtctctgacggagaaagtgggccgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagatgccccagagggaggctttgatgccatcatccaggctgctgtgtgcaag
gagcagatcggctggcgccctggtgcatcccacctcctcatcttcacctcagatgcaaag
actcatgtagctttagatggtcgcctggctggaatcgtgacgcccaacgacggacagtgc
cacctcaactctgagaacatgtacagcatgtcgactaccatggattatccatctctagca
ttgatcacagagaagatgtcggagaacaacatcaacctcatctttgctgtcaccaaccct
gtggttcctctgtaccagaactacagtgagctgattcctggcaccacagtaggaactctg
tccaatgactcaggcaatgttgttcagctcatactgaaggcctacgctaaaattcgttcc
aaggtggagctggagctgcaaggcgtcccggaggagctctctctgtcctttaacgccacc
tgtttgaatggagagttcatccctggcctcaagtcctgctctggactaaagatcggagac
acggtcactttcagtgtggaggccagagctcgtggttgccccaaacagaagaagaaaacc
ttcatcatcaagcctgtgggcttcaaggacgccctctccatcaccgtcaccttcgagtgc
gactgcaagtgccagaccaaagcccagcccaacagcccgaagtgtaaccatggcaacggc
acctacgagtgtggcatctgcttgtgccacccaggtcgcttgggaccacactgtgagtgt
gccgagggcgactataatcccacagagcaggaccgctgcagtggaccagcgggctccgga
gggccccagtctgcgatttgcagcggccgcggggactgcgtgtgtggccagtgtgtgtgc
cacagcagtgactttggcaaagtctggggcaaactgtgtgagtgtgatgacttcaactgc
ctgcgctacaagggggaactgtgctcaggccatggtgtctgtaactgtggcttctgccag
tgtgcaccagactggcagggtgagaactgtaactgctccagacgtactgacacctgtatg
tccaacctgggtctactctgcagtggcaggggccagtgtgtgtgcggggcctgtgagtgc
acccagcccggtgcctacggggccacgtgtgacaagtgccccacctgtcctgatgcctgc
actatgaagaaggagtgtgtggagtgtaagcacttcaagagaggcaagctgtttgtggac
aacacctgctctcgtatctgcaaggatgagattgagcttgtggatgaattagtgcttcat
gatacaaatgctgtgaactgcacttacaaggatgaggatgactgtgtggagcgtttccag
tactatgaggacgctagtggcaagtccatcttgtatgtcgtcaaagagccagactgcccc
aagggtccagacattttggtggtgcttctgtcagtggcaggagccatcttgtttctaggc
ttggcggctctgcttatctggaagctgctcgttaccatccacgacagacgggagttcgcc
aaatttgaggaagaacgcgctcgtgccaagtgggacacgggacacaatcctctctacaaa
ggagccacttccaccttcacaaacatcacgtacagaggaaaagactga
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