Thunnus thynnus (Atlantic bluefin tuna): 137176981
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Entry
137176981 CDS
T11154
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tty04040
]
137176981 (scn1lab)
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137176981 (scn1lab)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Spem1
IQ
New_glue
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
137176981
NCBI-ProteinID:
XP_067439143
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All DBs
Position
24:3852904..3898990
Genome browser
AA seq
2024 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRTERRSDSDDENGPKPNSDLEAGK
SLPFIYGDIPPPLVSTPLEDMDPFYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLRR
VAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRMPSNSTNSSNITADDTMLLN
NSLLDVNLTFAQNTTENYFNWTEYISDENNYYYLPGRRDALLCGNGSGAGLCPEGYLCIK
GGRNPDFGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFY
LVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSG
RRGPTSESSSGTSKLSSKSAKERRNRRKKRKQREEEEERGVRDKFRKSESEGSIKRSSFR
FSIDANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGSENDFADDEH
STFEESDSRRGSLFLPRRLERRSSAVSQTSLGAPRIMLPANGKMHCAVDCNGVVSLVGGT
SVTTSPVGLLLPEGTTTDTELKKRRTGFHHPSMDYLDEPGGRQRAMSVASILTNTMEELE
ESRQKCPPCWYRFANTALIWDCCPAWLKIKEFVSMVVMDPFVDLAITICIVLNTLFMAME
HYPMTEEFDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISEDCKLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMC
LIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFVKA
TVRQFLQSLCFGGGSAGSDLAKESKPLDELHSNGKGNCISNHTSVEITKDPSGVYMTEGN
GRPGGGLVVGVGVGGDSTGKYPVEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSS
DSSDVEGSKEKLDVEPQHLSSSEGSTVDIRPPGDGVDSVELEPEESQDPEACFTEGCVSR
FQCCQINEEGGKYKSWWTLRKTCFVIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTI
KTVLEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYRCVNTTTDDMLPINVVNNMSECLNLVNDSTRWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRNVEDQPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDCITKQAFDIVIMIL
ICLNMVTMMVETDDQTQDMAKILYWINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFV
VVILSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLL
APILNKREPDCDSQIEHPGNSYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFS
VATEESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRMPKPNMIQLI
SMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKVSYEPITTTL
RRKQEDMSAVIIQRAFRRYMIRLAMKKASTLYKEQLKEGIRDPDKDVMVISKFHENSTSD
KTDMTPSTASPPSYNSVTKSDKDKYEKENKEKENKGKDLKDRKK
NT seq
6075 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccgccccttcgtccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggaggaggcccggagaccacggacggagcgt
cgcagcgacagcgatgatgaaaatgggcccaagcccaacagtgacctggaggcggggaaa
tctctccccttcatctatggggacatccctccccccctggtgtccactcctctggaggac
atggaccccttctacagcaatcagaagaccttcatagtattgaatcgcgggaaggcaatc
ttccgtttcaatgccacccctgccttgtacatcttaagccccttcaaccctctaaggagg
gtagctattagagttttagtacactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctcagtaatcccccggaatgggccaagaatgtagagtac
acattcacagggatttacaccttcgagtcccttataaagatcctggccaggggcttctgt
gtggggaagttcactttcctccgagacccatggaactggctggatttcagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccctgaaaactatatcagtcatcccaggcttgaagaccatcgttggcgca
ctgatccaatcggtgaaaaagctgtcggacgtgatgatcctcaccgtgttctgcctcagc
gtgttcgccctcatcggcctgcagctcttcatgggcaacctgaggcagaagtgcatacgt
atgccgagtaacagcaccaacagcagcaacatcactgccgatgacacgatgcttttgaac
aacagcctgctggacgtcaatctcacgtttgcgcagaacaccacggagaactacttcaac
tggacggagtacatcagcgatgagaataattactattacctccctggccgtagggatgct
ctgctctgtgggaatggcagtggcgctgggctttgtccagagggctatttatgtatcaaa
gggggtcgtaatccggacttcggctacaccagctttgacaccttcagctgggcgttcctc
tctctgttccgactaatgacccaggactattgggaaaacctctaccagcagacgctgcgt
gcggcgggaaaaccctacatgatcttcttcgtgctggtgatcttcctgggctccttctac
ctggtcaacctgatcttggccgtggtggccatggcttatgacgagcagaaccaggctact
attgaggaggctcagcagaaggaagaggagttccaggccatgctggagcagctgaagaga
cagcaggaggaggcacaggttgccgcggcagcagccacggagagcggagagtacagtggg
agaaggggccccacctctgagtcctcctcagggacgtctaagctcagctcgaaaagtgcc
aaggagcgacgcaacaggcggaagaagaggaagcagagggaggaagaggaggagaggggg
gtccgcgacaagttccgcaagtctgagtccgagggcagcatcaagagatccagcttccgc
ttctccattgatgccaacagactctcttatgagaagagatgctcctcacccaaccagtct
ctcctcagcatacgtggatctctattctcgccacggaggaacagccgtgccagcctgttc
agcttccgtggccgggcacgtgacatgggctccgaaaacgactttgcggacgatgagcac
agtactttcgaggagagcgacagccgtcggggctccctgttcttgccgcgtcgcctcgag
cgccgcagcagcgccgtcagccagaccagtctaggggctccacgtatcatgctgcccgcc
aacggcaagatgcactgtgccgtagactgcaatggtgtggtgtcgctggttggtggaact
tctgtaacaacctcccctgtaggtctactgctgcctgagggtacaactacagatacggag
ctgaagaaacggcgcacaggttttcaccacccatccatggattatttagacgaaccagga
ggcaggcaaagagccatgagtgtggccagtatcctcaccaacaccatggaagagcttgaa
gagtctagacagaagtgccccccctgctggtatagatttgccaacactgctctgatctgg
gattgttgtcccgcgtggttgaaaatcaaggagttcgtcagcatggtggtcatggatcca
tttgtggatctggctatcacaatttgcattgtcctcaacacccttttcatggccatggag
cattaccccatgacggaggaatttgacaacgtcctctcagttggaaacctggtgttcaca
ggtatcttcacagcagagatgtgcttcaagatcatcgccctagatccctactactacttc
caggagggatggaacatttttgatgggatcattgttagtctgagtctgatggagcttggt
ttggccaacgtagaaggcctgtctgtgctcaggtccttcagattgctgagggtcttcaaa
ctggccaagtcatggcccactctgaacatgctgatcaagatcatcggtaactcagtggga
gctttggggaacttgactctggtgcttgccatcatcgtcttcatcttcgctgtggtgggc
atgcagctattcggcaagagctacaaggagtgtgtgtgtaagatttctgaagattgcaag
ctaccccgttggcacatgcacgatttcttccactccttcctgatcgttttccgggtgctg
tgtggagagtggatcgagaccatgtgggactgcatggaggtggcaggacagtcgatgtgc
ctgatcgtcttcatgatggtcatggtcattggaaacctggtggttctaaacctgttcctg
gctctcctcctgagctcattcagcgctgacaacctggcagcaactgacgacgacagtgag
atgaacaacctgcaaattgctgttggcaggatccagcggggcatcgcctttgtcaaagcc
acagtgcggcagttcctccaaagcctctgctttggtgggggcagtgcgggctctgatctg
gccaaagagagcaaacccctggatgaactgcacagcaatggcaaaggcaactgtatctcc
aaccacacttcagtggagatcaccaaagaccccagcggggtgtatatgacagagggaaat
ggacggccaggaggagggctggtggttggggtcggggttggtggggacagtacagggaag
taccctgtggaggaatgtgactacatgtcgtttattcataaccccagcctgacagtcacg
gtgcccatcgctgtgggcgagtcggactttgagaatcttaacacagaagatttcagcagc
gactcgtcagatgtggagggcagcaaagagaagctcgatgtagagccccagcatctcagc
tcttcagaggggagcacagtcgatattcgccccccaggagatggggtcgattcagtagag
ctggagccggaggagtcacaggatccagaggcctgcttcaccgagggctgtgtgagtagg
ttccagtgctgtcagatcaacgaggagggaggcaagtataagagctggtggaccctcagg
aaaacctgttttgtcatagtggagcacaactggtttgaatccttcatcatattcatgatc
ctgctcagcagtggagcgctggcgttcgaggacatttacattgagcagaggaggaccatc
aaaacagtgctggagtatgcggataaggtgttcacttacatcttcatcctggaaatgctg
ttgaagtgggtggcatacggcttcgtcaagtacttcactaacgcctggtgctggctcgac
ttcctcatcgtagacgtgtccttggtcagccttgtagccaatgctctgggctactctgag
cttagcgccatcaaatctctgaggacactgcgagccctccggcccctgagggccctgtct
cggtttgagggcatgagggttgtggtgaatgcgctgctgggggccatcccctccatcatg
aacgtgctgttggtctgccttatcttctggctcatcttcagcatcatgggtgtcaacctg
ttcgcagggaagtactatcgctgcgtcaacaccaccacagacgatatgcttcccatcaac
gttgtcaacaacatgtctgagtgcctgaacttggtcaacgacagcacccgctggaagaat
gtcaaaatcaactttgacaatgtcggtgccggctacctggctctgttgcaagtggcaaca
tttaagggttggatggacatcatgtatgcagccgtggactctcgcaacgtggaagaccag
cctgaatatgaagtgaacttgtacatgtacctctactttgtcatcttcatcatctttggc
tcctttttcaccctcaaccttttcattggtgtcatcatcgacaacttcaaccagcagaag
aaaaagtttggaggccaggacatcttcatgacagaggaacagaagaaatactataatgcc
atgaagaagctgggttccaagaaaccacaaaaacccatacctcggccaacaaatgcattt
caaggctgcgtgttcgactgcatcacaaagcaggccttcgacatcgtgatcatgatcctc
atctgccttaacatggtgaccatgatggtagagacggacgaccaaacacaagacatggcc
aaaatcctgtactggatcaacctggtcttcatcgtgctcttcacgggggagtgtgtgctt
aagatgatctcactgcgtcactattatttcaccattggttggaatatatttgactttgtg
gtagtgatcctgtcgattgtaggtatgtttttatccgaagttatcgagaagtactttgtg
tccccaacactgttccgagtgatccgtctggccaggataggccgcatcctccgccttatc
aaaggtgccaagggcatccggacgcttctctttgctttgatgatgtcacttcctgcccta
ttcaacattggcctcctcctcttcctggttatgttcatctacgccatctttggcatgtcc
aactttgcctatgtcaagcgggaggcaggaattgatgacatgttcaatttcgagaccttt
gggaacagtatgatctgtttatttcagatcaccacctcagctgggtgggatggtctgctg
gcgcccatactgaacaagagggagcctgactgtgatagccagatagagcacccaggcaac
tcctacaaaggcaactgtggcaacccatcagtgggcatcttcttctttgtcagctacatc
atcatttgcttcctcattgtagtcaacatgtacatcgctgtcatcctggagaacttcagc
gtggcaacagaggagagtgcagagccgctgagtgaggatgactttgagatgttctacgaa
gtgtgggagcgctttgatcctgacgccactcaattcatggagtacagcaagctctctgac
tttgcagatgctctagatccaccattgcgtatgcccaagcctaacatgatccagctcatc
tccatggacctgccgatggtcagtggggaacgcatccactgccttgacatcctgtttgcc
ttcaccaagcgagtgttgggcgaaggtggcgagatggatgtgttacgcgggcagatggag
gagcgcttcatggcctctaacccttctaaggtgtcttacgagcccatcaccaccacgctc
cgccgcaagcaggaggacatgtctgctgtaatcatccagagagccttccgccgctatatg
atccgcctagccatgaagaaggcctccaccctctacaaggagcagctgaaggagggcatc
cgtgacccagacaaggacgtgatggttatcagcaagttccacgagaactcaacctcagac
aaaacagacatgaccccctccacagcctccccgccctcctacaacagcgtgacaaaatcg
gacaaggacaaatacgagaaagaaaataaggaaaaagaaaacaaagggaaagacttgaaa
gaccgaaagaaatag
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