Thunnus thynnus (Atlantic bluefin tuna): 137182687
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Entry
137182687 CDS
T11154
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
137182687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tty04040
]
137182687
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
137182687
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
137182687
NCBI-ProteinID:
XP_067445156
LinkDB
All DBs
Position
5:8717299..8744537
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AA seq
1616 aa
AA seq
DB search
MFNWVVKVVPQPPEVPGTEEDGQAPAADLSKNKGAKNPALKNTEEGSDDSQGQAGVIGWL
SNGFVNALPQPSGTPGLRRSNSEANPGEDGERSGVIGWVAQNLTKVLPQPDDKYRETNEE
NEEHTEIYDVAAMPDYDPLPHIPVVEMVSEDEVSEVETPTPQFPPNVVNWIKQIIPQPVI
LPPGAVPMEQQTKSSRSSLDKILSPPPESLSGISLDTDSKASGVVGWFVSGLGLKIPQPA
IQPRNDDGTAEVLQKASSKLKPDMVLEDVESDNEGQQKCDYQSKAEAPSTSWAPPSPAAH
QQQEVTQQTQTNSLQVASMQSQEPVTLESTTKISQEDAETQTGRWTPFIESIKREAEDVA
LATMEERLLQERLEMARMAEEVARQTAEMAIRQMAIEGQSLKLSLGSQELLEEPEEELPV
SQEESEIEFSKVTGKEESVSEEEQKEETEEPTVSEPEPQEEAEPRQTSPSPPPSPEPVKT
SEPDPESEPESESEPEPEPEPESEPEPEEVDPEQQPETQEAKSEAEPVTQQPQKAKEDSQ
GANSDKTGEKEEEATGEDCGAPVSCDAFKSCLMRIPHTSECLGNINAFFKENGISPPKLP
SMPKLPTQLSDVTKHIPSLPPELRQELSNIRLTQVPRNIAQTLTELLPRGSDGSVSPSLS
SLSQSFSNIPQKLSQFPSRTQQYFLNVQNRLNSLMPQMPKKQQQQQKQKQDKNQQDLELN
QLVRHSPLPPPHHPQLRSRSPSPSSPNGSTLELPNVPSYPRLPPIVSPPSKQLNSPSRQL
SGLSNPAFFIEDDSDISAIRPAESSSLSLRPAVNVEDVDSDNERAGEGGAEGGGGGGGGE
EEQSTIPQILTPQDPKLTTLTVPVTPTGGRQSKGDKDRRLQSQSEDDDDEASIPVRAWPS
QSSLHNTDDVLRERPASSASQTSTVVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSVI
HSPPQAPAPGAQPMDGQEKEAQAGPSGRAGGLDGGEESEAEEKSSRCCKVKVPRWIRACM
HYRFPASIDPFTNLMYVLWMFLVSLAWNWNAWFIPVRWAFPYQTPDNIYYWLLTDYLCDL
IYILDLTIFQPRLQFVRGGDIVCDKKEMRKNYMKTKRFKFDVASLVPLEFFYFKTGINPM
LRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSAFIGLGS
TKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLINYFVGVFAFSIMIGQMR
DVVGAATAGQTYYRTCVDNTIKYMSSYHIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQL
PDKMRLDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMY
IIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLSVGGGNRRTANVIAHGFANLFILDKK
DLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEEAKEQPLFQAAPVKQETPKLLRAALE
MKERSSGLKGGLAKVKQKTNKSSISLQPSISSLPPPSPASSSAPDREEDTPSPISASSTM
FRSASRCRNNNNNSAMPHSASQCHSDTDEMLAVDQREEDDSEEEEKEGGKKKEKKL
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtcccccaaccccctgaagttcccgggacagaagaa
gatggccaggcccctgctgctgacctctccaaaaacaaaggagcgaagaatcctgcactg
aaaaacacagaggagggttcagacgacagccagggccaggctggagtaataggttggctg
tctaatgggtttgtcaatgccctgccacagccctctggcacccctggactcagaagatcc
aactctgaggccaaccccggagaggatggagaaaggtctggcgtgataggctgggtggct
cagaatctgaccaaggtgctgcctcagcctgatgacaagtacagagagactaacgaagaa
aatgaggaacacactgagatttatgatgtagcagcaatgccagattatgatcccctccct
cacatcccggtggtggagatggtgtcagaggacgaggtgtcagaggtagagactccgacc
cctcagttccctcccaacgtggtgaactggataaagcaaataatccctcaaccagtcata
ctgccccctggtgccgtaccaatggaacaacagaccaagtcctcccgctcctctctggac
aaaatactgtctccgccacctgaatctctcagtggaatctcactggatactgatagtaaa
gcctcaggtgtggttggctggttcgtgtcaggactgggcttgaaaatacctcagcccgcc
attcaacccagaaatgatgacggtacagctgaagttctacaaaaagcttcatccaaactc
aaacctgacatggtactagaagatgtggagtcagacaacgaggggcagcagaaatgtgac
tatcagtccaaagctgaagcaccatccacgtcttgggctccaccgtcacctgcagcacac
cagcaacaggaagtgacacagcaaacacagaccaattcactgcaagtggcatctatgcag
tctcaagaaccagtaacattagagagcacgacaaaaatatctcaggaagatgctgagacc
cagacgggccgctggacgccgtttattgaaagcatcaagagggaggctgaagacgtggct
ttggccaccatggaggaacgcctgctgcaggagcgtctggagatggcacgtatggctgag
gaggtggccaggcagacagctgagatggctattagacagatggccattgagggacagtcc
ctcaaactctcactggggagtcaagaactgctggaggagcctgaagaagagctgccggtg
tcacaagaggagagcgagatcgagttcagcaaagtcacaggaaaagaggagagcgtttct
gaggaggaacagaaggaagagactgaggaacccaccgttagcgaaccagagccacaggag
gaagcagagccacggcagacatccccttctccacctccaagtcctgaaccagtgaagacc
tctgagccggatccagagtcggagccagagtcagagtcagagccggagccagagccagag
ccagagtcggagccggagccagaggaggtggaccccgaacaacaaccagagacccaggaa
gccaaatccgaagctgagcctgtaactcagcagccacagaaagcaaaggaagacagtcaa
ggcgccaacagtgacaagactggtgaaaaagaggaggaagctactggggaggactgtggt
gctccagtcagctgtgatgcatttaagagctgcctgatgcgcattcctcacacctccgag
tgcctcggaaacatcaacgcgttcttcaaagagaacggcatctcccctcccaaattaccc
tccatgcctaagctacccacccagctctctgacgttaccaagcacataccctccctacca
cctgaactacgccaagagctctctaatatcagactcacgcaggttccccgaaatattgcc
cagactctgactgagcttttgcccagaggctctgacggttcagtcagcccgagcctgtcc
agcctctctcagagcttttcaaacatcccgcagaagctctcccagtttcccagccgaacg
cagcagtacttcctcaacgtccagaaccgcctcaacagccttatgcctcaaatgcctaag
aaacaacaacaacagcaaaaacagaagcaagacaagaatcagcaagacttagaactcaac
cagcttgtccgacactcccctctccctcctcctcaccatcctcagctccggtcccgctcc
ccgtctccatcctcccccaatggtagcaccctcgagttacccaatgtgccgtcctaccct
cgcctaccaccaattgtcagccccccatctaagcagctcaactccccatcccgccagctt
tcgggtctctctaatccggcgttcttcattgaagatgactcagacatttcagcaataaga
cctgcagagagctcgagcctcagcctccgtccagccgtcaacgtagaggatgtcgactca
gacaatgagagagcaggggaaggaggagcagaaggaggaggaggaggaggaggaggggag
gaggaacaaagtacaatcccccaaatccttaccccccaggaccccaaactaacaaccctc
actgtccctgtgacccctacaggaggtcgtcagagtaaaggagacaaagataggaggctg
cagtctcaaagtgaggatgatgatgatgaagcaagcatccctgtcagagcctggcccagc
cagtccagcctccacaacacagatgacgttttgagagaacgtccagcatcttcagccagt
cagaccagcacagtggtcaatgagcgtctgcaggagctggtcaggatgtttaaagagaga
acagagaaggccaaggagaaactcatagaccctgacagctctgatgaagacagcgtcatc
cactctcctcctcaggcacctgctcctggagctcagccaatggatgggcaagagaaggag
gcacaggcaggtccatcaggaagagcaggaggattagacggaggggaagagagtgaggca
gaggagaagtctagccgctgctgcaaggtgaaagttcctcggtggataagagcctgtatg
cactaccgcttccctgccagcatcgaccctttcaccaacctaatgtatgtgctgtggatg
tttttggtctctttggcgtggaactggaacgcatggttcatcccagtacgctgggccttc
ccctaccagactcctgacaatatttattactggctgctgactgactacctgtgtgacctt
atttacatcctggacctcaccatcttccagccgcgcctgcagtttgtccgcgggggggac
atagtgtgtgacaaaaaagagatgagaaagaattacatgaaaaccaaacgcttcaaattt
gatgtagccagtcttgttcccctggagttcttctatttcaaaactggcatcaaccctatg
ctccgcttacccaggctgctgaagatcaactccttcttcgagttcaacgagcgtctagag
gccatcttgaccaaagcctacatctatagggtgatccgtaccaccacctatctgctttac
tgtctccactgtaatgcctgtctctactactggggctctgccttcataggactggggtcc
accaagtgggtgtacaatggcaagggcaacagttacatccgttgttactactttgcggtg
aagaccctgatcaccattgggggtctaccagatcccaccaccctgtttgagatagtcttc
caactcatcaactactttgttggagtctttgccttctctatcatgattgggcagatgcga
gatgttgtaggggcagccacagcaggtcagacttactaccgcacctgtgtggacaacact
attaaatatatgtcctcatatcacatccccaaagatgtccagaaccgtgtcaaaacgtgg
tacaactacacttggcaatcacaaggcatgctggatgagcaggagctgctgactcagtta
ccagataagatgcgtctagacattgctatagacgtcaattactccatcgtcagcaaagtc
cctcttttccagggttgtgacagacagatgatctttgacatgctaaaaagcctacgctct
gttgtctacctgccaggagactatgtctgcaaaaagggtgaggttggtcgggagatgtat
atcataaaggcgggggaggtgcaggtggttggaggaccggatggaaagacggttttcgtc
actctcagagcaggttcagtctttggagagatcagtttgctctcagttggcggcggtaac
agacgcacagcgaatgtgattgctcatggctttgccaatctcttcatcctggacaagaaa
gacctgaatgagatcctagtccactaccctgagtccaagaaactgctccgcaagaaggcc
agaaaaatgctcaccaagggaaagaaacctgagcccaaagaagaggctaaggaacaaccc
ctgtttcaggcggctcctgtcaagcaagagacccccaaactgctgagagcggccctggag
atgaaagagagatcctctggacttaaaggaggtctagctaaagtcaaacagaagaccaac
aagtccagtatctcattgcagccatccatctcctccctccctcctccatctcccgcctcc
agctccgcacctgacagagaagaggacacgccatcacccatctcagccagctccactatg
tttcgctccgcttcccgttgccgcaacaacaacaacaactctgcgatgccccactctgca
tcacaatgccacagcgacacagacgaaatgcttgccgtggatcaaagggaggaggatgac
agtgaagaggaggagaaagagggtgggaagaagaaagaaaagaagttgtga
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