Thunnus thynnus (Atlantic bluefin tuna): 137187607
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Entry
137187607 CDS
T11154
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty02010
ABC transporters
tty04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137187607 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137187607 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tty02000
]
137187607 (abca7)
Transporters [BR:
tty02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137187607 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
137187607
NCBI-ProteinID:
XP_067452735
LinkDB
All DBs
Position
8:complement(13344309..13379229)
Genome browser
AA seq
2385 aa
AA seq
DB search
MGFFRQLGLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETPGQVGNFDNSIISRLFVDAQTVLSYSGNQS
FTGFQDLMDSVWRLGERSGAWPNLPIEEYLRANETFSTFLMTNGSLSPVTVDQLLKARLN
LQVAVAGAQMQLKDLVCNATMFGQFVTVDRGEGVMTDLQTQLCDLPADVLQEAERLFITQ
LDFTKFFTRDRLMANAGDLRVISQAVTTASQELAVLMDDFSSLSSFTEMSTALQLLSPVN
RTALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTVLDQANNTTP
FCKNLIQGLESNPLSRIVWRGIKPLFSGKLLYTPDTPEVQQVMKEVNKTFEDLQILQELN
EAWMEVGPQIKNYMESSVEIQLLQDLLKRPEVAVLVNMRLENTSWTASRITRFLSTPPPD
TPRRPGAPPTWLDIYNDLSHTIATLAQITECFSLNKLEGFDTEGQLINRALELLEDRQFW
AGVVFMLPNSSSSKLPPHITYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVTRILSGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTETLWLSWFISSLVPFLVSAALLIALLKWGDILPYS
DPAVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLKT
SHRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDSYNFTTSIVMLYVDAF
IYAIAAWYIEAVFPGEYGIPRPWYFIFQINYWGGVPLEAGMPIPPPPTEGDEDHIEPEPI
NLVLGVSIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRHDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGMSEAEVKAELE
TLLDDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSKLGSGYYLTVVKRE
GLDTSMPSSTSISTSTSTSSSKLPPLLKDSESSMSEDTGLGSEESSSNLAALLSLAQHHI
PGARLVEESGREAVMNLPQMAAKDTSMAVFLSELDQRLSELGLSSYGLSDSTLEEIFLRV
AEETGVDAEPEPQAEPPHNRQQPRQRVQRRHAEEPETGRKRLRKQEPQETDLLSGDGQGG
LPLTGWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLIALLFSLIAPPFGKYPS
LQLQPWMYGEQYTFYSNDAPGNTAVENLLEALLDQPGFGTKCMEKEEEYNNTSPQCKNER
GGFFMRPQLSYSTWQMFSRGNWSRERPSPDCQCSTEDVRRMLPDCPQGAGGLPPPQIKRL
TGDVLQNLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVHHVQ
DSIMAIRTRYQVPQNSSLDHLLNRLPDFLGGLNSQNNVKVWYNNKGWHAMVSFVNVMNNG
LLRASLPPGPERRKHGITAYNHPLNLTKEQLSEMAMMATSVDVLVSICVIFAMSFVPASF
VLFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFISFQQQSYVSE
TNLPALVLLLLLYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFV
DEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGKN
LFAMAAEGVIFFIFTILLQYKFFIRFRPWWAEPEMPPLGPEDEDVARERQRVKTGNAQAD
ILTMIDLSKVYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPITCGEA
FLNHHSVLTEMERVHQLMGYCPQFDAISDLLTGREHLELYARMRGVPEESVAKVAQWGVK
KLGLTQYAEREAGGYSGGNKRKLSTAISLIGSPPVIFLDEPTTGMDPKAKRFLWNCILSV
TKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILHLADTKT
DPDSCPINTYMKSSFPSIDLKERHQNVLQYQLPSHACCLARVFNVLANNYEDLGIIDFSV
SQTTLDQVFVNFAKEQTDDDRLTEVLISNGTVQTNMAALLNRFNPPTVQAQPSITPLQPS
KPPQQQHHLTPGKSPDSKPKEGKSKQAKTSKGKSKEGNREKSSGTAMSRIPQPEKMSRRS
SSGSNSSGAQGETSKPSGSKHRGESSSKDPSALFVVGTNTQDSSL
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgggatttttcaggcagctcggtctcctgctctggaagaacatcacataccgcaggaga
aacaagatccagctgatcatcgagctcctctggccgctcttcctcttcgttatcctcatc
tctgttcgtcattcgcaccctccttacaaacagagccaatgtcacttcccgaacaaagcc
ttgccatcagcaggcaccctgccctggattcagggcattatctgcaacatcaacaacccc
tgcttccacagcccgacaccaggggagacaccgggccaagttggcaactttgacaactcc
ataatttctcgtctctttgtggacgcccagactgttctgtcctacagcggaaaccagagc
ttcactggctttcaggatctgatggacagcgtctggaggctgggagaaagatctggagct
tggccaaatctcccaatagaagaatacctgcgagccaatgagacgttctccaccttcctc
atgaccaacggcagcctgtcgcctgtgactgtggaccagctgctgaaggctcgtctcaat
cttcaggttgctgtggccggagctcagatgcagctgaaggacttggtgtgtaacgccacc
atgttcggacagtttgtgacggtggacagaggagaaggagtcatgactgatctgcagacg
cagctgtgtgacctgccagctgacgtcctgcaggaggccgagcgcctctttatcactcag
cttgactttactaagttcttcacgagagaccgtctgatggccaacgctggcgacctcagg
gtcatcagccaagccgtcaccacagcttctcaggagctggctgtcctcatggatgatttc
tcctccctctccagctttacggaaatgagcaccgcgctgcaacttctgtctccggtgaat
cggacagcactgcccagggagagttttcgggctttttcaaggatcatgtgtggtcatcca
gaggttggcggtgagcgaataccatcactcaactggtatgaagataatgacatcaagtcc
ttcctgggcaaaaacggcactgaggacaccgtcctggaccaggccaacaacaccactcca
ttctgtaaaaatctgatccagggtctggagtccaaccctctgtctcgcattgtgtggcga
ggaatcaaacctctgttcagtggaaaacttctgtatacaccagacactcctgaagtacaa
caagtcatgaaagaggtgaacaagacttttgaggacctgcagatcctccaggagctgaat
gaagcctggatggaggtgggaccacaaatcaagaattacatggagagcagcgttgagatt
cagctgctgcaggatttgttaaagcggcctgaggtcgcagtgctggtcaacatgcgtctg
gagaacacatcctggacggcctcgcggatcacacgtttcctgtctacacccccgccagac
acccctcggaggcctggagcgccccccacctggctggacatctacaacgacctcagccac
accatcgccactcttgcacaaatcactgagtgtttctccctgaacaaacttgaggggttt
gacactgaaggtcagttaatcaacagggcgctggagctactggaggacaggcagttttgg
gcaggtgtggttttcatgcttccaaactcctcatcttctaagctgccgccccacatcacc
tacaagatccgaatggacattgatgatgttactcgcaccaataagatcaaggacaggttt
tgggatcctggtccagcggccgacccgttcaatgacatgcgctacatttggggcggcttc
gtgtacgtccaggacctggtggagagagctgtgacccgtatcctgagcggagttaaacaa
acaactggcatctacatccagcagatgccatacccctgctatgtggatgatgttttcctc
cgagtgctgaaccgctccctgccacttttcatgacactggcctggatctactcagtggcc
atgatcatcaagggcgtggtatacgagaaggaggcaaggctgaaggaaaccatgaggatt
atgggtctgggtacggaaacgctgtggctcagctggttcatcagcagccttgtgcctttc
ctggtgtctgcagcgctccttattgctctgctcaagtggggggacatcctgccatacagc
gacccagctgttgtgtttttcttcctgacggcgtttgccaccgccacgatcatgcagtgt
ttcctcattagcaccttcttctccaaagccaacctggctgctgcctgcggggggctcata
tacttcagcctctacttgccctacgtgctgtgtgtggcctggagagaccatctcaagacc
agtcacagagtccttgctagttttctctctcctgtggcgtttggattcggctgtgagtac
ttttctcagtatgaggaacaaggtgtgggaatccagtggtacaacctgcactcgagtcct
gtggaaggagattcatacaacttcactacctctatagtcatgctttacgtggacgccttc
atctacgccattgcagcctggtacatcgaagccgtgttccctggtgaatatgggatcccc
aggccctggtacttcatcttccagatcaactactggggtggagtccccctagaggcggga
atgccgattccccctccgcctacagagggggatgaagatcacattgagccagaacccatt
aacctggtcctgggtgtgagcataagaaacctggtgaaaatctacaagaagggagccaag
ctggccgtcaaccacctcaacctgaagttctacgaggggcagatcacctcgtttctcggc
cacaacggagccggcaagactactaccatatctgtcctgactggcctgttcccgcccacc
tcggggacagtgtatatcaaggggatggacatccgccatgacatggacatcatccggagg
acgctgggagtttgtccacagcacaatgtcctgtttgacattctaacagtggaggagcat
gtgtggttttatgggtgtctgaagggtatgtctgaagcagaggtgaaggctgagcttgaa
actctgctggacgatgtcggcctgctgcacaaacgacacgaacagaccaagaatctctct
ggtggtatgcagaggaagctgtctgttgcgatagcatttgtcggaggctccaaggtggtt
gttctggatgaacctacagctggcgttgacccgtactcccgccgtgggatatgggatctg
ctgctcaaataccgcaaagaccggaccatcatcctgtccactcactacatggacgaggcg
gagctgctaggtgaccgtatcgccatcatttctcaggggaagttgtgctgctgcggctcg
ccactctttctgaaatctaaactgggatctggatactatctcactgtggtcaagagagaa
ggactggacaccagcatgcccagcagtaccagtatcagtaccagtaccagtaccagctcc
agcaagctgcctcctctcctcaaggacagcgagtcctccatgagtgaagacaccgggttg
ggaagtgaggagagcagctcaaacctggcagcattgctctccctggcgcagcaccacatc
ccgggtgcgaggctggtggaggagtcagggcgcgaggcggtgatgaacctgccccagatg
gctgctaaggacaccagcatggctgtcttcctgtctgaactggaccagagattgagtgag
ctgggcctcagcagctatggcctttcagacagcacactggaggaaatctttctgcgagta
gcagaggaaactggtgtggatgctgaaccagagccgcaggctgaacctccacataatcgg
cagcaacctaggcagagagtgcaaagacgacatgctgaagaaccagagacaggaaggaaa
aggcttcgtaagcaagaacctcaggagacagacctgcttagcggagatggccaaggtggg
ttgcccctgaccggatggtggctgacctggcaacagctgagagctctcttcatcaaacgc
tggctttacgctcgcaggagccgcaggggcttctttgctcagattgttctgcctgctgtg
tttgtgctcatcgccctgctcttcagcctcatcgcacctccatttgggaagtacccttct
ctgcagctccagccctggatgtatggagaacagtacaccttctacagcaacgacgcccct
ggaaacacggctgtggagaacctgctggaagcgctgcttgaccagccaggttttggtacc
aagtgcatggagaaagaggaagagtacaacaacacgagccctcagtgtaaaaacgagcgg
ggcggcttctttatgcggccacagttgtcgtactccacctggcaaatgttcagcagaggc
aactggagcagagagagaccttctcctgactgtcagtgtagtacagaggatgtccgccgg
atgctccctgactgtccgcagggtgccggtggacttccgcctccgcagattaagaggttg
actggagacgtcctccaaaatctgacaagttataacatctctgattatctggtgaagacc
tactctcagatccttaagaaaagcctgaaaaccaagaagtgggtgaatgaattcagatat
ggaggcttctccctcgggggcagcgccacccagactttatctcaggtgcatcatgtccaa
gactcgatcatggcaatcaggactcgttaccaagttccacagaatagttcactggatcat
ctcctgaacagactgccagattttctgggaggactgaacagtcaaaataacgtcaaggtg
tggtacaataataaaggttggcatgctatggtgtcatttgttaacgtgatgaacaacggc
ctgttgagagccagcctgccaccaggtccagagaggagaaaacacggcatcaccgcctac
aaccacccgctcaacctcaccaaggagcaactcagtgaaatggccatgatggccacatca
gtggatgttctggtttctatctgcgtgatatttgccatgtcctttgtgccagccagcttt
gtccttttcctgattgaggagcgagtcagcaaggccaaacaccttcagtttgtcagcggg
gtcaaaccaatcctttactggctggccaatttcacctgggacatgttgaactacactgtc
ccagccaccatggtggtgctgatcttcatcagtttccagcagcagtcatacgtctctgag
accaacctgcctgctctcgtcctgctcctcctgctctacgggtggtccatcacccctttg
atgtacccagcatcctttgtgttctccgttccaagcacggcctacgttgttctgacctcc
atcaacctcttcatcgggatcaacggcagcatcgccacatttgtgttggagctgtttgta
gacgagcatttgaatgaggtgaaccggatcctgaagaaggtgttcctcatcttccctcat
ttctgcctgggacgaggactcatcgatatggccaagaaccaggccatggcagacgccttt
cagagactgggcaccaaacagactctggaccctcttcagtgggactttgtagggaagaac
ctctttgcaatggcagctgaaggtgttatcttcttcatcttcaccatactgctgcaatac
aagttcttcattcgcttcaggccgtggtgggccgagcctgagatgcctcctctcggtcca
gaagatgaagacgtggccagggagagacagagggtcaaaactggcaacgcgcaagccgac
atcctcaccatgatagatctcagcaaggtttacaaagcaggcaggaagccagcagtggat
cgtctgtgtctcgggattcctcgcggcgagtgttttggcctgctgggggtgaacggagca
gggaagacttctacgtttcgcatgctgacaggagacacgcccatcacctgtggtgaagct
ttcctcaaccaccacagtgtcctgacagagatggagcgagtccaccagctgatgggttac
tgcccacagtttgacgctattagcgacctgttgacaggtcgggaacatctggagctgtac
gcccgcatgcgaggggtgccagaggagtctgtcgccaaggtggctcagtggggggtgaag
aagctgggactgacccagtacgctgagcgggaggctggaggctacagtggaggcaacaag
aggaaactttccactgccatctccctcatcgggtctccgcctgtcatattcctagatgag
cccaccaccggcatggatccaaaggctaaaaggtttctgtggaattgcatcctcagcgtc
accaaagagggaagagcagtagttctcacctcccacagtatggaggaatgtgaggctctc
tgcaccagaatggccataatggtcaacggcaggttccagtgtcttggatctgtacaacac
ctgaagaacaggtttggtgacggctacaccatcatcctccatctggcggacactaaaacg
gacccggactcctgccccatcaacacctacatgaagagctccttccccagcatcgacctg
aaggagcgccaccagaacgtgctgcagtaccagctgccctcacacgcctgctgcctggct
cgtgtcttcaatgttctggccaataactatgaggatctgggcatcattgacttctctgtc
tcacagaccactctggaccaggtgtttgtcaactttgccaaagagcagactgatgacgat
cgcctcacagaggtgctcatcagcaacgggacagtacagaccaacatggctgccctgctc
aaccggtttaaccctcccactgtccaagcacagccgtcaatcacacccctccagcccagc
aagcctccgcagcagcagcatcacctgacacctgggaaatcacctgacagcaaaccaaaa
gagggtaaatcaaaacaggctaaaactagtaaaggtaagtctaaagaaggcaacagagag
aaaagcagcggtacagcgatgagcagaatacctcagccagagaagatgagtcggaggagc
agcagcggctcaaacagcagtggcgctcagggagaaaccagtaaacccagtgggtccaaa
cacagaggagagagctccagcaaagatccttctgcactctttgtagtcggcaccaacaca
caggacagctcgctgtga
DBGET
integrated database retrieval system
