Thunnus thynnus (Atlantic bluefin tuna): 137192632
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Entry
137192632 CDS
T11154
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tty04040
]
137192632 (scn1laa)
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137192632 (scn1laa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
PFF1_TM
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
137192632
NCBI-ProteinID:
XP_067459581
LinkDB
All DBs
Position
11:17960885..17990660
Genome browser
AA seq
1870 aa
AA seq
DB search
MAQLLVPPGPDSFRPFSRESLSAIERRISEEKAKKPKGEKKKRNDEDELKPSRDLEEGKS
LPLLYGDIPKGMVSKPLEDLDPYYSNQRTFIVLNKGKYIFRFNAAPALYFLSPFNPLRRI
SIWILVHSLFNMVIMCTIITNCAFMTMKETGKNVEYTFTAIYTFESLIKILARGFCMGKF
TFLRDPWNWLDFSVIVMAYVTEFVSLGNFSVLRTFRVLRAFKAISVIPGLKTIVGALFQS
VKKLSDVMILTVFCLSVFALIGLQLFMGNLQQKCVLNVANGSNTGQQAGQDNCTTGSDLN
KSCYYYLPGKRDPLLCGNTSEAGQCPEGYICKKVGRNPDYGYTSFDSFGWAFLSLFRLMT
QDYWENLYQQTLRAAGKPYMLFFVLVIFLGSFYLVNLILAVVAMAYEEQSQATIKEAKEK
EEEFQAMLEQLRQQQEDAQAAAMADAAESGEVSDKGGGTESSSDNSKLSSKSAKERRNRR
RKKKVEEGKGADEKFPKSESQDSIRKAARCRFSVDANLLNYDMKCSSAHQADTTDTEYKQ
TGGGTHRESIDFLEAPAARDRTYSVASVITSTLEELEESRQKCPPCWYKFAHALLIWECC
PAWLKVKKVVKLIVMDPFADLIITTCIVLNTLFMAMEHYPMSESFTQMLYVGNVVFTSIF
TAEMVLKIIALDPYYYFQEGWNIFDGIIVSLSLMEFCLTSAVGMSVLRSFRLLRVFKLAK
SWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISPSCSLPR
WHMDDFFHSFLIVFRVLCGEWIETMWDCMEVSSSPSSSSGAAMCIIVFMMVMVIGNLVVL
NLFLALLLSSFSADNLAATEDDSDMNNLQIAIGRIHKGIAFAKSLLRSTCNSVCLRDKNK
KKGEDKSLDELHKPLGPNGVPNYTIKDPRNGNGDVIGVDKNGDKYIVSSKSDDSIMSFIN
NPSLTVTVPIAVVESDFENLNTEDFSSASSDAAVCPMNVDDDGQLSSSEGSTVDYGEGGE
GRESIDFELNESMDPDACFPAGCVQKFQCCQVNVEVGWWKIWWTLRKTCYQIVEHNWFES
FIIFMILLSSGALAFEDIYIEKRKTIKTVLEFSDKIFTYIFILEMLLKWVAYGFAKYFTN
AWCWLDFLIVDVSLVSLVANTMGCAELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLG
AIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNTTTNEMLLREVVKNKSECDALGKD
VAHWKNVKINFDNVGMGYLALLQVATFKGWTKIMYAAVDSPLKQEDQPKYEINLKMYMYF
VVFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPSNKIQGYLFDFTTKQAFDIVIMVLIWLNMVAMMVETAEQSPRKKNILYNVNLVFIIL
FTGECLLKMISLRQYYFTNGWNIFDFIVVILSIIGTFLSDLIETYFVSPTLFRVIRLARI
GRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEEGIDD
LFNFETFGNSMICLFQITTSAGWDGLLAPILNKNEDECDNATEHPGSSVKGDCGNPPVGI
AFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEEFDPDATQFM
EYNKLSDFADALEPPLRIAKPNKIELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMD
ILRGQMEERFMASNPSKVSYEPITTTLRRKQEDTSAVVIQRAFRQYARRHATIKPSDKSR
DNIQKDETLSDKEDLVTDKLNVSSADKNDLTPSTASQPPCNSVTTNGKNKYEKDKSEKEV
MGKDVREQDI
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccaccaggaccagacagcttccgcccctttagtcgcgagtcc
ctctctgccatcgagagacggatctccgaagagaaagctaagaaaccaaagggagagaag
aaaaaacgcaatgatgaggatgagcttaagcccagtcgtgacctggaggagggcaaatca
cttcctcttctgtatggggacattcctaaaggaatggtctcaaaaccattggaggacctg
gatccatactacagcaatcagagaactttcatagtattaaacaaaggaaagtacatcttc
cgcttcaatgccgctcctgccttgtacttcctgagccccttcaaccctcttagaagaata
tcaatatggattttggtacactcattgttcaacatggtgatcatgtgcactatcatcacc
aactgtgcatttatgacaatgaaagaaacgggaaagaatgtagaatacacatttactgca
atctatacatttgaatccctcattaaaattttagcgcgagggttctgtatggggaagttc
acatttcttagagatccctggaactggctggatttctctgtcattgttatggcgtacgta
acagagtttgtgagcctaggcaatttctcagttcttcgcacattcagagtgctgagagct
tttaaagctatttcagttatcccaggcctgaaaaccatcgttggtgcattgttccagtca
gtgaagaagctgtctgacgtgatgatcctcaccgtcttctgcctgagtgtctttgccctc
atagggttacaattgtttatgggtaatttacagcaaaagtgtgtactgaatgttgcaaac
gggagtaatacaggccaacaagctggccaggataactgcacaactgggtccgacctcaat
aagagttgttattattacctcccaggcaaacgggatccattgctttgtggaaacaccagt
gaagcggggcagtgtccagaggggtacatatgcaaaaaagtgggaaggaaccccgactat
ggttacaccagcttcgactcatttggttgggccttcctttctctgtttagactgatgaca
caggattactgggaaaatctctaccagcagacgttacgggcagctggaaagccctacatg
ctctttttcgtgctggtgatattccttggttccttctacctggtcaacctgatcttggct
gtagtggctatggcatatgaggagcagagtcaggcgaccattaaggaggctaaggagaag
gaggaggagtttcaggccatgcttgagcagctgaggcagcagcaagaggatgcacaggca
gcagcaatggcagatgctgcagagagtggggaggtcagtgataaaggtggcggcactgag
agctcatcagacaactccaagctcagctccaaaagtgccaaagagagacgcaacaggaga
agaaaaaaaaaagtggaggagggcaaaggggctgatgagaagtttccaaaatccgagtct
caggacagtatacgcaaggctgcgcgatgccgcttctctgtggatgcaaacctgctcaac
tatgacatgaaatgctcgtctgcacatcaggctgacaccactgacacagagtacaaacag
actggcggaggaacacaccgggagtctattgacttcctcgaggccccagcagccagagac
agaacttatagtgtagctagtgtcataaccagcacactggaggagttggaagagtcgagg
cagaagtgtcctccttgctggtacaagttcgcccacgccctcctcatctgggaatgttgt
ccagcatggctaaaggtcaagaaagtggttaaactaattgtaatggatccattcgcggac
ctaatcatcaccacctgcattgtgctcaacacattatttatggccatggagcattatcca
atgtctgagagtttcacccaaatgctgtatgtgggcaatgtggtgttcactagcatcttc
acagctgaaatggtcctaaagatcattgctctggacccatactactactttcaggaggga
tggaatatttttgatggaattattgtcagtttaagcttgatggagttttgtttgacaagt
gcggttggcatgtctgtcctgagatcattcagattgctgagagtattcaagttggctaaa
tcatggcccactcttaacacactgatcaaaataattggtaactcagtgggggctttgggt
aacctgaccctggtgctggccatcatcgtcttcatctttgctgtagtgggcatgcaactg
tttggaaaaaactacaaggactgtgtgtgtaaaatctcacccagctgcagtctgccccgt
tggcacatggatgacttctttcattcattcctcattgtgttccgagtgctttgtggagag
tggatagagaccatgtgggactgtatggaggtgtcttcttcaccttcttcttcttctgga
gcggccatgtgcatcatagtcttcatgatggtcatggttattggaaaccttgtggtgctg
aacctgttcctggccctgctgctgagttcattcagtgctgacaacctggcagcgacggaa
gatgacagcgacatgaacaatttgcagattgccattggacggattcacaaaggcattgcc
tttgccaagtcccttctccgaagcacctgcaacagtgtctgtctcagggataagaacaaa
aagaagggtgaggacaaatccctggatgagctccacaaacctttaggaccaaatggggtc
cccaactatacaatcaaagaccccaggaatggcaacggggatgtgattggagtggacaaa
aatggcgacaagtacattgtcagcagcaagagtgatgattccataatgtctttcatcaac
aatcccagtctgactgtcactgttcctattgctgtggtagagtctgactttgaaaacctc
aacacggaggacttcagcagtgcctcatctgatgcagcagtatgcccaatgaatgtagat
gacgatggccagctcagctcctcagagggcagcacagtggactatggggaaggtggggag
ggaagagaatctatagattttgaattaaacgaatctatggatcctgacgcctgctttcct
gctggctgtgtgcaaaagttccagtgttgtcaggtaaatgtggaggtgggctggtggaaa
atatggtggacactaagaaaaacctgttatcagatagtggagcacaactggtttgagagc
ttcatcatcttcatgatcctgcttagcagtggggcactggcatttgaagatatctacatt
gagaagaggaagaccattaaaacggtgttggagttttcagacaaaatctttacctacatc
ttcattctggagatgttactgaaatgggttgcgtatggatttgccaagtatttcacaaat
gcctggtgttggctggatttcctcattgttgatgtttcactggtcagtctggtagccaat
accatgggatgtgctgaacttggtgccatcaagtctctgagaaccctgcgagctctgagg
cccctgagagccctgtcacgatttgagggcatgagggtggttgtcaatgctctgctagga
gccattccttccatcttcaatgtgctgttggtatgtctcatcttctggctcatcttcagc
atcatgggagtcaacctattcgcaggaaagtactaccattgtgtcaacacaaccacaaat
gagatgctccttagagaggtagtgaagaacaagtcagagtgtgatgccttggggaaagac
gttgctcactggaagaatgttaaaatcaactttgacaatgttggcatgggttaccttgca
ctgctgcaagtggctacgttcaagggctggacgaaaataatgtatgctgctgttgactct
ccactcaagcaagaagaccaaccaaagtatgagatcaacctgaagatgtacatgtatttt
gttgttttcatcatatttggagccttcttcacactcaatctcttcattggtgtcattata
gacaatttcaatcaacaaaagaaaaagtttggaggtcaagacatcttcatgactgaagaa
cagaagaaatactacaacgccatgaaaaagttgggatcaaagaaaccacaaaaacctatt
cctagaccatcaaacaagattcaaggatacctctttgacttcaccacgaaacaagcattt
gacattgtaataatggttctcatatggctcaatatggtagctatgatggtggaaactgct
gagcagtcaccacgaaagaaaaacattctatacaatgttaatctggtcttcattatcctc
ttcactggagagtgtttgttgaagatgatctcactccgccagtactatttcacaaatggg
tggaatatatttgatttcatcgtggtcattctgtcaatcattggcacatttctctcagat
ctgattgagacgtattttgtttcaccaaccttgttcagagtcatccgattggctcgaatt
ggccgcatcctccgccttattaaaagtgccaaaggaatccgcacactcttgtttgccttg
atgatgtcacttcctgccttgttcaacattggtctcttgctcttcttggttatgtttatt
tatgccatctttggcatgtcaaactttgcttacgtcaaaaaagaagagggcattgatgac
cttttcaatttcgagacatttggaaacagcatgatctgtttgttccagatcaccacgtcc
gcaggatgggatggcctgctagctcccattcttaacaaaaatgaagacgagtgcgacaat
gccacggagcatcctggtagttctgttaaaggagactgtggaaatcctcctgtgggaatt
gctttctttgtgagctacatcatcatctgtttccttattgtggtgaatatgtacattgca
gtcattctggaaaacttcagtgtggccactgaggagagtgcagaaccactgagtgaggat
gattttgaaatgttttatgaggtctgggaggagtttgaccctgatgcaacccagttcatg
gagtacaataaactttcagattttgctgatgctctggagccaccattacgcatagctaag
cctaacaagatcgaactgatctctatggatctccctatggtgagtggagaacgcattcac
tgcctggacatcctgtttgcattcacgaaacgtgttctaggcgagggtggggagatggac
atcctaagggggcagatggaggagcgcttcatggcctccaatccttccaaagtgtcctac
gaacccatcactaccacccttcgccgcaaacaggaggacacatcggccgtggtcatccag
agagcattcagacagtatgcaaggagacatgctaccattaagccctctgacaaatccagg
gataacattcagaaggatgaaacactcagtgacaaagaggatcttgtcacagacaaactc
aatgtttctagtgcggataaaaatgacctaacaccttcaacagcctctcaacctccatgt
aacagtgtgacaacaaatggaaaaaacaaatatgaaaaagacaaaagtgaaaaggaggtt
atgggcaaagatgtcagggagcaagatatatga
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