Triticum urartu (red wild einkorn wheat): 125511555
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Entry
125511555 CDS
T08232
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125511555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125511555
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125511555
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125511555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
125511555
NCBI-ProteinID:
XP_048532915
LinkDB
All DBs
Position
5:complement(647239684..647258636)
Genome browser
AA seq
2404 aa
AA seq
DB search
MVPLNHPGVAAEVRLVLQGATDADRESVRRELCQLVDYGHDGCLLLLQVCLDEVLLNDRE
AKNLQLKHDLLSATFRYCLDKTFFSTCFCEALMQIKTGTDGLLETLSSALELSAAEKVGI
GLALSDSDNSGMKLKGQQFAIAQIEELCLNPNQSVPNDQIHEIVVFLHQTDGLTKHMDTF
SNIASLLEVGQSPFFAPIPKDQHDVQSINHSRHLEMYLDSTNDDFESLLSEIGKEISMAD
IVTELGYGCTVDSTQCKEILSTFQPLDDVAISKLLGAVIGTQNSLAEAHNTYATFVSAIR
NTHLSESPQLTTWNTDVLVDSINELAPSTNWVHVMESLDHEGFSIPDEAAFCLLMNIYGR
ACKDPFPLHAVCGSMWTNTEGQISFLKHAISAPATIFTFAHSSRLLALPDFASLGPGNHA
WFCLDLLEVLCQLAEVGHTVSVRSMLDYPLGHCPELLLVGLGHINTAYNLLQFEVLSCAF
SAILKDTTKRNVVNYLWHINPCLTLRGFVDAHSDPSCLLRIVDVCHDLKILSAVLESTPF
AFSIRLVAAACRKDHSHLEKWLTEKLTVYKDGFVEDCVNFLKEAMNAASYAVEGTTEQPQ
FSVVDTYWEACPPFIKVLQSHLGQLLSNQLSDELRELCALYESRNQGPVARDIPTSEGGS
DDVEVEANAYFHQMFSGQINIDVMIQMLTRFKESPDKREQSIFNCMISNLFEEYKFFTKY
PDKQLKLAAVLFGSLIKHELVAHLGLGIALRAVLDALRKSVDSKMFMFGTTALEQFMDRV
IEWPQYCNHILQISHLRATHAEMVSAIERALARISSSQNEPNAGNLLSTEQLVSGSSSIE
AMEASEPSWQLMGTSPTQLGRTPYPLQQRQPSVLGDRSKISIGTSQNKSILPSQPSVPSA
SADSAFNLKTTVPPSLAHSMSMSNSAHSTSFLRPRNTSTVLPRQHSYTTGFGNALNIETL
VAAAEQRDNPIETPPSEVQDKILFMINNISTSNMEAKAKEFNEVLQEQYYPWFAQYMVMK
RASIEPNFHDLYLKFFDKLNSRSLSKEMLKATYENCKVLLRSDLIKSSSEERSLLKNLGS
WLGKFTIGRNQTLRAKEIDPKSLIVEAYERGLMIAVIPFTSKILEPCHSSIAYRPPNPWT
MGILSLLSEIYNLPNLKMNLKFDIEVLFKNLSVDMKDVKPTSLLKDRGREVEGNPDFSNK
DVASSQTPVAAEVSSGVNPPIKHVDLQPEVNSTSRTLSLPTLYTAPVRLPPNSMVEDDKI
ALMMPEQVPSHTLTQVSSSQTPLVSLSPSPLSLTQLLSLIPHDEIRFKISSKLLPFGSQL
QFSKIMGVALDKAIKEIILPVIERSVSIASKTTKEIILKDYATESDYSAANRSARLMVGT
LAGSLAHVTCKEPLRVALLSHLRSLTQNLASNSETLEQVVQVLINDNLDLGCASIESVAA
RKAVDSIEGEITQSFSQQRKKREAAGPTYYDSFTYAQGPFAPVPEVFHTKAESPAQQRVY
EEFGHVWQSHGQSVGAAGSGTAAVSSNFGVPRAYSPSLAQASSAFLSAQTAPLTLTQPTE
LVYEELIPGAAQLSSDSPAQVGISDSSGWLGGTIGDASTSPPLMSNDLPAGGIMDLNVMT
PPPATFSDNLGSGLPDTLSTGDAMERYEQVSQKLEVLIAKDGKDVEIQSVVAEVPDILLK
CVNRDEAALAVAQKVFKSLYDNTSNSGFVMWSLATLVAIRDVCKLVVKELTNSVIYLDDE
KKFNSEIIFALIRSDLLDVKEYNVHLAKLIDGGRNKIATEFAMSLVQTLITQDSASISEL
QDVVDVLSKISRRPGSPELMQQVNEIARNNANNAPGFAFGKDKKVLPNRANKEENSVNDA
TVADSVAFQDQVAHLFSEWCQICDHPNASDAAYSRYVMQLQHIGLLKGDEFTERFFRILT
ELAVAHSLVSEQINAPGGLSQQSSHISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKI
LSVTIRVIQKDAEEKKASFNPRPYFRLFINWLNDLSTSELHHDGANFQVLAAFANAFHVL
QPSRIPSMSFAWLELVSHRTFMARLLTGNSQKGWPFFQRLLIDLFKFMEPYLRTADLLEP
VHLMYKGTMRVLLVLLHDFPEFLCDYHFSFCDVIPSSCIQMRNVILSAFPRNMRLPDPST
PNLKIDLLAEISLPPRIMSDVDGALKSKHMKADVDEYLKRPEGSSFLNDLKQKLLLPQNE
ANVAGTRYNVPLMNSLVLYIGIQAVQQLQANKANASASAQQINHNTMDIFQIETATEFFR
YLVTNLDTEGRYLFLNAIANQLRYPNSHTHYFSFIILYLFAEAAQEHIQEQVTRVLLERL
IVNRPHPWGLLITFIELIKNPRYNFWNRAFTHCAPEIKQLFESVAKSCGGGAGKAVDDGS
DGGH
NT seq
7215 nt
NT seq
+upstream
nt +downstream
nt
atggtcccgctgaaccaccccggcgtcgccgccgaggtgcggctggtgctgcagggcgcc
accgacgccgaccgcgagtccgtccgccgcgagctctgccagttagttgactatggtcac
gatggatgtcttttgctgctccaagtctgtttggatgaagtgctgctgaatgacagggag
gccaaaaacttgcagttgaagcatgatcttctatccgccactttcagatattgtctggat
aaaacgttttttagcacttgtttctgtgaggcactgatgcagataaaaactggtaccgat
ggcctccttgagactctgtcgagtgcactggaactctcagcggccgagaaagtcggtatt
ggtcttgcgctgtcagattctgataattcaggcatgaagctgaaagggcaacaatttgca
attgctcaaattgaggagttgtgtttgaatcctaatcaatcggtaccaaatgatcaaatt
catgaaatcgtcgtcttccttcaccagaccgatggcctgacaaagcatatggatactttt
agtaacattgcttctcttctagaagttggacagagtcctttttttgctcccatccccaaa
gatcagcatgatgttcagtcaataaatcattcaagacatttggagatgtacttggatagc
acaaatgatgactttgagtcacttctttctgaaattgggaaagaaataagtatggcggac
atagtaactgagttgggttatggatgcactgttgacagcacacagtgtaaggaaatactt
tccacttttcagcctcttgatgatgtggcaatatctaagttgctcggggcagttattggc
actcaaaatagtcttgcagaggcccataacacttatgcaaccttcgtatctgctattcga
aatacccacttgagtgagtcgcctcaattgactacatggaacacagatgttcttgtggat
tcaatcaacgaattggccccaagtactaattgggtgcatgttatggaaagccttgatcat
gagggtttcagtattcctgatgaagcagctttctgtttactgatgaatatatatggccgc
gcttgcaaggatccctttccgcttcatgctgtttgtgggtcaatgtggacaaatacagaa
ggccagatatcatttttaaagcatgcaatttctgcccctgctactatttttacatttgca
catagttcgaggctgctggcacttccggactttgcaagtcttggtccaggtaatcatgct
tggttttgccttgaccttctagaggttttgtgccagcttgctgaagttggacacactgtg
tcggtgcggtccatgctcgattatcctttgggacattgccctgaactcctacttgttggt
cttggacacatcaacactgcatataatctcctccaatttgaagtgctgtcctgtgcattt
tctgctattctgaaggacaccacaaagagaaatgtggtgaattatctctggcatattaac
ccatgcctcacccttcgaggatttgttgatgctcattctgatccaagttgtctcctgaga
attgtggatgtgtgtcacgacctgaagatcctatctgctgtcctcgagtccactccattc
gcatttagcattagattggtggctgctgcttgtaggaaagatcatagccatcttgagaaa
tggctcactgagaagttaactgtatacaaggacggttttgtcgaggactgcgttaatttc
ctgaaagaagctatgaatgccgcatcttatgcagtagagggtaccacggaacaacctcaa
tttagtgttgtggacacgtattgggaagcttgtcctccctttataaaggttctccagtct
cacttgggacagctcttatccaaccaactctcggatgaactaagggagttgtgtgctctg
tatgaatcgagaaatcagggtcctgtagcaagggacatacctacctcggagggaggttca
gatgatgttgaagtagaagcaaatgcgtattttcaccagatgttttctggacagataaac
attgatgtgatgatacaaatgctcactcgcttcaaagaatctccagataagagggagcaa
tcaatttttaattgtatgatctcaaatctgtttgaggaatacaagttctttacgaagtat
ccggataagcagcttaaactagctgctgtgctatttggatcccttatcaaacatgaactt
gtggcccacctcggacttgggattgctctacgcgctgttcttgatgccttacgcaagtct
gttgattcaaagatgtttatgtttggtacgacagcattggaacaattcatggatcgtgta
atagagtggccacagtactgcaatcacatattgcagatttcacatcttcgagctactcat
gctgaaatggtctctgcaattgagcgagcacttgcccgaatttcatcaagtcaaaatgag
cccaacgctggcaacttgctttctacggagcagcttgtttctggatcgtcatctattgaa
gccatggaggcatctgaaccatcatggcagttaatgggtacatctccaactcagctagga
aggacaccttacccgttgcagcaaaggcaaccaagtgtccttggagacaggtccaagatc
tccatcggcacctctcagaataagagcattttacctagtcagccttcggttccttcagca
tctgctgattcagcctttaatttaaagactactgttccaccttcattagctcactctatg
agcatgtcaaatagtgctcattccactagttttctgcgcccccggaatacctcgacagtt
ttgccccggcaacattcctacactacgggatttggaaatgctttaaatattgagacactt
gtagctgcagcggagcaaagagataatccaattgagactcccccatctgaagttcaggac
aagatcttgtttatgattaacaatatatccacctctaatatggaagccaaggcgaaagaa
tttaatgaagtgcttcaggaacaatattatccttggtttgcacagtacatggtcatgaaa
agggcaagcatcgagccaaattttcatgatttatacctgaaattctttgacaaacttaac
tcaagatccttgagtaaggagatgctgaaagctacatatgagaactgcaaggttttgtta
agatcagatcttatcaaatctagttccgaggaacgttccttgctaaaaaatttgggcagt
tggttgggaaaatttaccattggaagaaaccagacattaagagccaaggaaattgacccg
aaatctcttattgtggaggcttatgagagaggacttatgattgctgtaattccattcact
tcaaagattctcgaaccttgccattcaagtatagcatatcgtcctccaaatccgtggaca
atgggaattcttagtctactttctgagatctataatctaccaaacctgaagatgaatcta
aaatttgacattgaggtcctgtttaagaacctcagtgtggacatgaaagatgtgaaaccg
acttcccttcttaaagatcgaggacgtgaagttgagggaaacccagatttttcaaacaaa
gatgttgcttcgtcccaaaccccagtggctgcagaagtctcttcaggtgtcaacccccca
ataaaacatgtagacctgcagcctgaggtcaatagcacttcccgtaccctgagccttcca
actttgtatactgctcctgttcgtctccctcctaacagtatggtggaggatgataaaatt
gctctaatgatgcctgagcaagttccctctcacaccttgacccaggtctcatcttcacaa
acaccattagtatcactatcgccatcgccactctctctaactcagcttttgtcgctgatt
ccacatgatgagatacgcttcaaaataagctcaaaacttttgccttttggctcacagttg
cagttcagcaaaatcatgggtgtggctttggataaggctatcaaagagataatactcccg
gtcattgaaagaagtgtctcaatagcaagcaaaactacaaaagaaattattctaaaggat
tatgcaacggaatctgattacagtgccgcaaatcgctcggctcgtttgatggtcggaaca
ttagctggaagtctagcccatgttacttgcaaggaaccgcttcgtgttgcgctactgtct
catctccgaagccttactcaaaaccttgctagcaacagcgaaactcttgagcaagtagta
caggttctgatcaacgacaatttggatcttggctgtgcaagtatcgagtctgtagcggcg
cgcaaggctgttgattcgattgagggtgaaataactcaatccttttcacaacaaaggaag
aaaagagaggcagctggtcctacatattatgactcttttacttatgctcaaggtccattt
gcccctgtacctgaagtattccataccaaggcagagtctcctgcccaacaacgagtatat
gaggagtttggtcatgtatggcagagtcatggccaaagtgttggtgctgcaggttctggt
acagctgctgtatcgagcaattttggtgtacctcgagcttacagcccaagtttagcacaa
gcttccagtgctttcttgtctgctcaaacagctccacttacattaactcagcctacagag
ctggtgtatgaggaattgattcctggcgctgcacaactttctagtgattctcctgctcaa
gttgggatcagcgactcttctggctggcttggtggaaccattggtgatgcatccacatct
ccacccttgatgtctaatgacttacctgcgggtggaataatggatttaaatgttatgacg
ccacctccagctacattttctgacaatctaggatctggtttacctgatactttgagcact
ggtgatgctatggagagatacgaacaggtttcacaaaagctggaagtcttgattgccaag
gatggtaaagatgtggaaatccagtctgttgtagcggaagttcctgatatcttactcaaa
tgtgttaaccgggatgaggctgcattagctgttgcacaaaaggttttcaaaagtttgtat
gacaacacatcaaatagcggttttgtcatgtggtctctagcaaccttagttgcgataaga
gatgtatgcaagcttgttgtcaaggagctaacaaattccgtaatctatttggacgatgag
aagaagtttaatagtgaaatcatttttgcccttattcgttctgatttgctggatgtcaaa
gagtacaatgttcatttagcaaagctaattgacggtggaagaaacaagattgcaacagaa
tttgccatgtcacttgtccagacattgattactcaggactctgctagtatctcagaactc
caggatgttgttgatgtgctatcaaagatttcaaggaggccaggttcacctgagttgatg
caacaggtgaatgagattgcaaggaataatgctaacaatgctcctggttttgcttttggg
aaggataaaaaggttctacctaaccgggcaaacaaagaggaaaacagtgttaacgacgcc
actgtagctgattctgttgcttttcaagaccaggttgcacacctattttctgagtggtgc
caaatatgtgatcatccaaatgctagtgatgcggcctatagtcgttatgttatgcagttg
caacatattggcctgctgaagggagatgaattcactgagcgtttcttccgaattctcacg
gaacttgctgttgcacactctctagtctctgagcaaattaatgctcctggtggattgtct
cagcagtcatcacatatatcatatttccccattgattcatattcgaagcttgtgtctgtg
gtgataaagaattgttcagtggaaataggaccaaataaaggcagccttcttcccaagata
ttgtcagtgacaattagggtcattcagaaagatgctgaagagaagaaagcttcatttaac
ccccgaccatactttcggctgtttatcaattggctgaatgaccttagtacttctgaactc
catcatgatggagctaatttccaggttttggctgcatttgcaaatgcattccatgtactg
caaccctcgagaattcctagcatgagctttgcttggcttgagttggtgagtcatagaacc
ttcatggcaagactgctgacgggcaattcacaaaaagggtggccttttttccaacggcta
cttattgatctgttcaaattcatggaaccgtatttgagaactgccgaccttttagaacca
gtgcaccttatgtacaaaggaactatgagagtgctgcttgtactactccatgactttcct
gaatttctgtgtgattatcacttcagtttttgtgacgtgatcccttccagttgcattcaa
atgcgcaatgtcattcttagtgcttttccgcgcaacatgagacttccagacccatctact
cctaacttgaagattgatctgctagctgaaatttcattacctccacgaatcatgtcagat
gtcgatggtgccctcaagtcaaagcatatgaaggctgatgtcgatgagtatcttaagaga
ccagaaggctcatcctttttgaatgatctgaagcaaaaattgctgctgcctcagaatgaa
gctaatgttgctgggacacgctacaatgtgcctctgatgaattcgcttgttctctacatt
ggcatccaagcggtgcaacaattgcaagcgaacaaggcaaatgcatctgcgtcagcacag
cagattaaccataatacaatggatatttttcagatcgaaacagcgactgaatttttcaga
tatcttgtaacgaacttggatacagaggggcgctacctatttttgaatgcgattgctaac
caactgcgctacccgaatagccacacacactacttctccttcatcattctgtatctattt
gctgaagctgcccaggaacatatccaggagcaggtaaccagggttctcttagaacggctg
atagtgaaccgtcctcacccctggggattactcatcaccttcatcgagctgataaagaac
ccacgctacaacttttggaaccgagccttcacacactgcgcacctgagattaagcagctg
tttgagtcggtcgcaaagtcatgcggtggaggcgctggaaaggcagtggatgatggctct
gatggcggccactaa
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integrated database retrieval system
