Triticum urartu (red wild einkorn wheat): 125544954
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Entry
125544954 CDS
T08232
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua00040
Pentose and glucuronate interconversions
tua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125544954
Enzymes [BR:
tua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125544954
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
125544954
NCBI-ProteinID:
XP_048564715
UniProt:
A0A8R7PVM4
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Position
3:complement(553424856..553426555)
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AA seq
378 aa
AA seq
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MALKELLMSVTLLFLLLRAATANHRHENVIDRCWRGQPNWATDRQRLAMCSVGFAGKMRQ
NRGHGVTVYTVTDPGDDPVQPKPGTLRYGATVLPGKVWITFRPGTMHIRLAQPLFVKSFT
AIDGRGADVHVAGGAGIVLYEVSNVVIHGLHVHGVRAQAPGRVVRPGGAVQTMDAGDGDA
IRLLSSSKVWIDHNTLARCEDGLLDVTLGSTDVTVSNNWFHDHDKVMLLGHDDQHVADRR
MRVTVAFNRFGPNVNQRMPRIRHGYAHVVNNFYDGWREYAIGGSMGPTVKSQGNLFIAST
ANSANVTRRMPVGHAAGKDWHWHSSGDSFENGAVFKQTGSRVRPNYNRHQTFPAASADEV
RSLTKDAGALRCSAGAAC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaaagaattactcatgtccgtcaccctcctcttccttctcctccgagccgcc
accgcgaaccaccggcacgagaacgtcatcgaccggtgctggcgcggccagcctaactgg
gccactgaccggcagcggctcgccatgtgctccgtcggcttcgccgggaagatgcggcag
aaccgcggccacggagtgaccgtgtacacagtcaccgacccgggcgacgaccccgtgcag
cccaagcccggcacgctgcggtacggcgcgacggtgctgccggggaaggtctggatcacc
ttccggccgggcaccatgcacatcaggctggcgcagccgctcttcgtcaagagcttcacg
gcgatcgacgggcggggcgccgatgtgcacgtcgcggggggcgccggcatcgtgctctac
gaggtgagcaacgtggtcatccacgggctccacgtgcacggcgtccgcgcgcaggccccc
gggcgtgtcgtccggcccggcggcgccgtgcagaccatggacgccggcgacggcgacgcc
atccggctgctgtccagctccaaggtgtggatcgaccacaacacgctggcgcgctgcgag
gacggcctcctggacgtgacgctcgggtccacggacgtgaccgtctccaacaactggttc
cacgaccacgacaaggtgatgctgctgggccacgacgaccagcacgtcgccgaccgccgg
atgcgggtcaccgtggcgttcaaccgcttcggccccaacgtgaaccagcgcatgccgagg
atcaggcacggctacgcccacgtcgtcaacaacttctacgacgggtggagggagtacgcc
attggagggagcatggggcccactgtcaagagccagggcaatctgttcatcgcctccacg
gcgaacagtgccaatgtgacgagaaggatgccggtcggacatgccgctgggaaggactgg
cattggcactccagtggggactcgtttgagaacggcgccgtcttcaagcagaccggcagc
agggtgcgcccgaattacaacaggcatcagacgttcccggcggcgagcgccgacgaggtg
agatcgctgaccaaggacgccggtgctctgaggtgctccgccggggccgcgtgctga
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