Turicibacter sp. KK003: VXM77_11415
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Entry
VXM77_11415 CDS
T10570
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tuk Turicibacter sp. KK003
Pathway
tuk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VXM77_11415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tuk03021
]
VXM77_11415
03400 DNA repair and recombination proteins [BR:
tuk03400
]
VXM77_11415
Enzymes [BR:
tuk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VXM77_11415
Transcription machinery [BR:
tuk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VXM77_11415
DNA repair and recombination proteins [BR:
tuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VXM77_11415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WWR13250
LinkDB
All DBs
Position
complement(2357676..2358620)
Genome browser
AA seq
314 aa
AA seq
DB search
MLEIEKPRIEIEEYIKDEFYGKFVIEPLKRGYGTTLGNSLRRVLLSSLPGAAVTSISIEG
VQHEFTSIDGVVEDVTQIILNLKNLILSIDSEEVKELRIDVAREGAVTAADIECDEEVEI
INPDLHIATLSATGRLRMTMKARRGNGYVGADDNKKLLESTGEIAIDSIYTPVTRVSYDV
EKTRVGQDASYDKLTLEVWTNGSVNPQEAISLASKILVEHFSILVNLNEAGQLAAFIVER
EDEEKNKVLEMPIEELDLSVRSYNCLRRAGINTVEELARHSEEDMMKVRNLGKKSLKEVK
DKLDELGLSLGCTK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatcgaaaaaccaagaattgaaattgaagaatacatcaaagatgaattctat
gggaaatttgttattgagcctctaaaacgtggatatggtactacgttagggaattcctta
cgtcgagtattactatcatcacttcctggagctgcggtaacatctatttctatagaagga
gttcaacacgaatttacctctattgatggtgttgttgaagatgtaacgcaaattatttta
aatttaaaaaatttaattttatctattgattcagaggaagttaaagaacttcgtattgat
gttgcaagagaaggcgcagtaactgccgctgacattgagtgtgacgaagaagtagaaatt
attaatccagatttacatattgctacattatcagctactggtcgtttaagaatgactatg
aaagctcgtcgtggaaatggttatgtaggtgcggatgataataaaaaacttttagaaagc
actggtgaaattgcaattgattctatttatactccagtaacacgcgtttcatacgatgta
gaaaaaacacgtgtaggacaagatgcatcatatgataaattaactttagaggtatggact
aacggtagcgtgaatcctcaagaagcaatttctttggcatctaaaattttagttgaacac
ttcagcattttagttaatttaaatgaagctggacaacttgcagcatttattgttgaacga
gaagatgaagaaaaaaataaagtattagaaatgccaatcgaagagttagatttatcagtt
agatcatataactgtttacgtcgtgctggaatcaatacggttgaagagttagctcgtcat
tctgaagaagatatgatgaaggttcgtaatttaggtaaaaaatcattaaaagaagttaag
gacaaacttgacgaattaggattaagcctaggttgcactaaataa
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