Tumebacillus avium: CBW65_12695
Help
Entry
CBW65_12695 CDS
T04874
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tum
Tumebacillus avium
Brite
KEGG Orthology (KO) [BR:
tum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tum03016
]
CBW65_12695
Enzymes [BR:
tum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CBW65_12695
Transfer RNA biogenesis [BR:
tum03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CBW65_12695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ARU61790
UniProt:
A0A1Y0INH2
LinkDB
All DBs
Position
2673801..2674355
Genome browser
AA seq
184 aa
AA seq
DB search
MGRYFLGLEVPKETCGAMLLKVEERLEPSLDVKKWYRPEQFHITTHFLGDLDAGQVQRVI
ELVTPHTAVQQPFRLRIDHAGWFPRAKVVWCGVTGDIGPLQDLYAVLAEPLNTLGAGRFA
HDQFRPHITLGRLRSADPKWQPPQVADLLEGAEWEVSALHLYESVSAGAQGPDYPARHTF
QFQV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgggacggtattttctcggactggaagtgcctaaggaaacgtgcggcgcgatgctgctg
aaggtggaggagcggttagagccgagcctcgacgtgaaaaagtggtatcgcccggagcag
tttcacatcacgactcattttctcggcgatctggacgcagggcaggtgcagcgggtgatc
gagctggtcacaccgcacacggccgtgcagcagccgtttcgcctgcgcatcgaccatgcg
ggctggttcccgcgcgcgaaggtcgtctggtgcggcgtcaccggcgacatagggccgctg
caagacttgtatgcggtgctggcagagcctttgaacacgctgggcgccgggcggtttgcc
cacgaccagtttcgcccgcacatcacgctgggccgcctgcgctccgccgatccgaaatgg
cagccgcctcaggtggccgacctgctggaaggtgcggagtgggaagttagcgcgctgcac
ctgtacgaatcggtgtcggccggtgcccaaggcccggattatccggcgcggcatacgttt
cagtttcaagtataa
DBGET
integrated database retrieval system
