Tupaia chinensis (Chinese tree shrew): 102491328
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Entry
102491328 CDS
T02978
Symbol
DDB1
Name
(RefSeq) damage specific DNA binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03420
Nucleotide excision repair
tup04120
Ubiquitin mediated proteolysis
tup05161
Hepatitis B
tup05170
Human immunodeficiency virus 1 infection
tup05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102491328 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
102491328 (DDB1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102491328 (DDB1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102491328 (DDB1)
05161 Hepatitis B
102491328 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tup04121
]
102491328 (DDB1)
03400 DNA repair and recombination proteins [BR:
tup03400
]
102491328 (DDB1)
Ubiquitin system [BR:
tup04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
102491328 (DDB1)
DNA repair and recombination proteins [BR:
tup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102491328 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
102491328 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
102491328
NCBI-ProteinID:
XP_006169694
LinkDB
All DBs
Position
Un
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSSGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgttgattgccaaaaacacaagattagag
atctatgtggtcactgctgaggggcttcggccagtcaaagaggttggcatgtatgggaag
attgctgtcatggagcttttcaggcccaagggggagagcaaggacctgctgttcatcttg
acagccaagtacaatgcctgcatcctggagtacaagcagagtggcgagagcattgacatc
attacgcgagctcacggcaatgtccaggaccgtattggccgcccctcagagactggcatt
attggcatcattgaccctgagtgccggatgattggcctgcgactctatgatggcctattc
aaggttattccactagatcgggacaataaggagcttaaggcctttaacatccgcctggag
gagttgcatgtcatcgacgtcaagttcctttatggctgtcaggcacctaccatttgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagcggaagcttccatggtgatt
gcagtgccagagccctttggaggggccatcatcattgggcaggaatcaatcacctatcac
aatggcgacaaatacctggcaatagcccctcctattatcaagcaaagcaccatcgtgtgc
cacaatcgagtggatcctaatggctcacgatacctgctgggagacatggaggggcgactc
ttcatgctgcttttggagaaagaggaacagatggatggcacggtcaccctcaaggatctt
cgtgtagaactccttggagagacatccattgccgagtgcttgacgtacctcgacaatggc
gtcgtgtttgtcgggtctcgtctgggtgactcccagctggtgaagctcaatgttgacagc
aatgaacaaggctcctatgtcgtggccatggagacctttaccaatttaggacccatcgtg
gatatgtgtgtggtggacctggagaggcaggggcaggggcagctggtcacttgctctggg
gctttcaaggaagggtccttgcggatcatccggaatggaattggcatccacgagcatgct
agcattgacttaccaggcatcaaaggcttatggccgctgcgatctgaccctaaccgtgag
acagatgacactttggtgctttcttttgtgggccaaaccagagttctgatgttgaacgga
gaggaggtggaagaaaccgaactgatgggtttcgtggatgatcagcagactttcttctgc
ggcaacgtggctcatcagcaacttatccagatcacttcagcatctgtgaggttggtctct
caagaacctaaagctctagttagtgaatggaaggagcctcagggcaagaacatcagtgtg
gcttcctgcaacagtagccaggtagtggtagccgtgggaagggccctctactacctgcag
atccatcctcaggagctccgacagatcagccacacagagatggaacatgaagtggcctgc
ttagacatcaccccattaggggacagcagtgggctgtcccctctttgtgccatcggcctc
tggacggacatctcagcacggatcttgaagctgccatcttttgaactgctgcacaaggag
atgctgggtggagagatcattcctcgctccatcctgatgaccacctttgagagcagccac
tacctcctctgtgccttgggagatggggcacttttctacttcgggctcaacatcgagaca
ggcttgttgagcgaccgtaagaaggtgactttgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaggtgaactacatgtgt
cccctcaactctgatggctatccggatagcctggcactggccaacaacagcaccctcacc
attggtaccatcgatgagattcagaaactgcacatccgcaccgttcctctctatgagtct
cccaggaagatctgttaccaggaagtgtcccagtgttttggggtcctctcgagccgcatt
gaagtccaagacacaagtgggggcacaactgctctgaggcccagtgccagcacccaggcc
ctgtccagcagtgtcagctccagcaagttgttctccagcagcacagctccccacgagacg
tcctttggagaagaggtggaagtgcacaacctccttatcattgaccagcacacctttgaa
gtgcttcatgcccaccagtttctgcagaatgagtatgccctcagcctggtctcctgcaag
ttgggcaaagaccccaacacatacttcattgtgggtacagccatggtgtatcctgaagag
gcggagcccaagcagggtcggattgtggtttttcagtattcagatggaaaactacagact
gtggctgaaaaggaagtgaaaggggccgtttactcgatggtggaatttaatgggaaactg
ttagccagcatcaatagcacggtgcggctctacgagtggacgacagaaaaggagctgcgc
accgagtgcaaccactacaacaacatcatggccctgtacctgaagaccaagggcgacttc
atcctggtgggcgacctcatgcgctcagtgctgctgctcgcctacaagcccatggaagga
aactttgaagagattgctcgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaatttcctgggagctgaaaacgcctttaacttgtttgtgtgtcagaaggac
agtgctgccaccactgacgaggagcggcagcatcttcaggaggttggcctgttccacctg
ggcgagtttgtcaacgtcttctgccacggctctctggtcatgcagaatctgggggagacg
tccaccccgacacagggctcagtgctctttggcacggttaatggcatgattggactggtg
acctccctgtcagagagctggtacaacctcctgctggacatgcagaatagactcaataag
gtcatcaagagtgtgggcaagatcgagcactccttctggagatcctttcacactgaaaga
aagacagagccggccaccggcttcatcgatggtgacttgatcgagagtttcctggatatc
agccgccccaagatgcaggaggttgtggcaaacctacagtatgacgatggcagcgggatg
aagcgagaggccactgcagacgacctgatcaaggtggtagaagagctaactcggatccac
tag
DBGET
integrated database retrieval system
