Tupaia chinensis (Chinese tree shrew): 102496922
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Entry
102496922 CDS
T02978
Symbol
SCN5A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 5
KO
K04838
voltage-gated sodium channel type V alpha
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
102496922 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tup04040
]
102496922 (SCN5A)
Ion channels [BR:
tup04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102496922 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102496922
NCBI-ProteinID:
XP_006161412
LinkDB
All DBs
Position
Un
AA seq
2019 aa
AA seq
DB search
MANFLLPRGTSSFRRFTRESLEAIEKRMAEKQARGTATLQESREGLPEEEALRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYILSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHEPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNGTNGSVEGGGQI
WVSLDTYLNDPVNYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTTHERKNKRRK
RMSSGTEECGDDRFPKSDSEDGPRALNRVSLTHGLSRTSMKPRSSRGSIFTFRRRDPGSE
TDFADDENSTAGESESHRTSFLVPWPLRRPSAQGQPSPGASTPGHVLNGKRNSTVDCNGV
VSLLGTGDAEATSPGSRLLRPGMLERPPDTTTPSEEPGGPQMLTPQAPCADGFEEPGARQ
RALSAVSILTSALEELEESHRKCPPCWNRFAQRYLIWECCPLWMAIKQKVKFVVMDPFAD
LTITMCIVLNTLFMALEHYNMTAEFEEMLQVGNLVFTGIFTAEMTFKIIALDPFYYFQQG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSDLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGEMNN
LQLALARIQRGLRFVKRTTWDFCWGLLRRRPKLPAALAARGRLPDCITTPNSPPLPETEK
APPARKETRFEEGERPGQGTPGDSEPVCVPIAVAESDTEDQEEDEENSLGTEDESSKQES
QPMSGSPVASRQPRAWSQVSETASSEAKTSASQADGQQQRQKAEPRAPGCSENHEDSFSE
GSTADMTNTADLLEQIPDLGEDVKDPDDCFTEGCVRRCPCCTVDTTQSPGKVWWRLRKTC
YRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKW
VAYGFQKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFE
GMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTQGDMPLNYTIV
NNKSECESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQP
QWEYNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVN
ILAKINLLFVAIFTGECIVKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFS
PTXXXXXRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMAN
FAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNGSGS
RGDCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIW
EKFDPEATQFIEYSALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFT
KRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLLQ
RSVKHASFLFRRQAGSGSLSDDDAPEREGLIAYMMNENFSQRLDPPSSSSISSTSFPPSY
DSVTRATSDNLQVRMSDYSRSEDLADFPPSPDRDRESIV
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttcctgttacctcggggcaccagcagcttccgcaggttcacacgggagtcc
ctggaggccatcgagaagcgcatggcggagaagcaagcccgtggcacggccaccctgcag
gagagccgggaggggctgcccgaggaggaggcgctccggccccagctggacctgcaggcg
tctaaaaaactgccggatctttatgggaatcctccccgagagctcatcggggagcccctg
gaggacctggaccctttctacagcacccaaaagaccttcattgtgctgaataaaggcaag
accatcttccggttcagtgccaccaacgccttgtacatcctcagtcccttccaccctgtc
cggagagcagctgtgaagatcctggttcattcgctcttcagcatgcttatcatgtgcacc
atcctgaccaactgcgtgttcatggcccagcacgagcctccgccctggaccaagtatgtc
gagtacactttcactgccatttatacctttgaatcgttggtcaagattctggctcgaggc
ttctgcctgcacgctttcaccttccttcgggacccgtggaactggctggacttcagcgtg
attgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagccttacgcacc
ttccgagtcctccgggccttgaaaactatatcagtcatttcaggcctcaagacaatcgtg
ggggccctgatccagtctgtgaagaagctggccgatgtgatggtcctcacggtcttctgc
ctcagcgtcttcgccctcatcggcctgcagctcttcatgggcaacctgaggcacaagtgt
gtgcgcaacttcacggcgctcaacggcaccaatggctccgtggagggcggcggccagatc
tgggtgtcgctggacacctacctcaacgatccagtaaactacctgctcaagaacggcacc
tccgatgtgttactgtgcgggaacagctcggacgccgggacatgtcctgagggctaccgg
tgcctaaaggcaggtgaaaaccccgaccatggctacaccagctttgactccttcgcctgg
gccttcctcgcactcttccgcttgatgacacaggactgctgggaacgcctctaccagcag
accctgaggtccgcagggaaaatctatatgatcttcttcatgcttgtcatcttcctgggc
tccttctacttggtgaacctgatcctggctgtggttgccatggcctatgaggaacaaaac
caagccaccattgctgagactgaggagaaggaaaagcgcttccaggaagccatggagatg
ctcaagaaagagcatgaggccctcaccatcaggggtgtggatactgtgtcccgtagctcc
ttggagatgtcccctttggccccagtaaccacccacgagagaaagaacaagaggagaaaa
cgaatgtcttctgggacagaagagtgtggagatgacagattccccaagtctgactcagaa
gatggtcccagagcactgaaccgtgtcagcctcacccatggcctcagcaggacttccatg
aagccacgctctagccgggggagcattttcacctttcgacggcgagacccaggctccgag
acagactttgcagatgatgaaaacagcacagcaggggagagcgagagccaccgcacttca
ttcctggtgccctggcccctgcgccggcccagtgcccagggacaacccagtcccggggcc
tcgactcctggccatgtcctcaatggcaaaaggaatagcactgtggactgcaatggggtg
gtctccttgctgggaacaggagacgctgaggccacatccccagggagccgcctcctccgc
cctgggatgttggaacgccccccagacacgaccacaccgtcggaggagccgggcgggccc
cagatgctgaccccccaggctccgtgcgcagatggcttcgaggagccgggagcacggcag
cgggccctcagcgcggtcagcatcctcaccagtgcactggaagagctggaggagtcccac
cgcaagtgtccgccatgctggaaccgcttcgcccagcgctacctgatctgggagtgctgc
ccgctgtggatggccatcaagcagaaggtgaagttcgtggtcatggacccgttcgctgac
ctcaccatcaccatgtgcatcgtgctcaacacgctcttcatggcgctggagcactacaac
atgacggccgagttcgaggagatgttgcaggtcggaaacctggtcttcacgggaatcttc
acagcagagatgaccttcaagatcatcgcccttgaccctttctactacttccagcagggc
tggaacatcttcgacagcatcatcgtcatcctgagcctcatggagctgggcctgtcccgc
atgggcaacctgtcggttctgcgctccttccgcctgctgcgcgtcttcaaactggccaaa
tcatggcccacgctgaacacgctcatcaagatcatcgggaactccgtgggggcgctgggc
aacctgacactggtgttggccatcatcgtgttcatcttcgccgtggtgggcatgcagctc
ttcggcaagaactactccgagctgagacatcgcatcagcgactccgacctgctgccccgc
tggcacatgatggacttcttccatgccttcctcatcatcttccgcatcctctgtggcgag
tggatcgagactatgtgggactgcatggaggtgtctggacagtccctgtgcctgctggtc
ttcttgcttgttatggtcattggcaaccttgtggttctgaacctcttcctggccttgctg
ctcagctccttcagcgcggacaacctcacagcccccgacgaggacggcgagatgaacaac
ctccagctggccctggcccgcattcagcgagggctgcgctttgttaagcggaccacctgg
gacttctgctgggggctcctgcggcggcggcccaagttgccagcagccctggccgcccga
ggccggctgcccgactgcatcaccacccccaactccccaccgctcccagagacggagaag
gcacctccggcccgcaaggagacgcgctttgaggaaggcgagcggccaggccagggcact
cccggggactcggagcctgtgtgcgtgcccatcgctgtggccgagtcggacacagaggac
caggaggaggacgaggagaacagcctgggtacagaggacgagtccagcaagcaggaatcc
cagcccatgtctggcagcccagtggcctcccggcaacccagggcctggagccaagtgtca
gagactgcctcctcagaggccaagaccagtgcatctcaggccgacgggcagcagcagcgg
cagaaggcggagccccgggccccagggtgcagcgagaaccacgaggacagtttctccgag
ggtagcacagcagacatgaccaacaccgctgacctcctggagcagatccccgacctcggg
gaggacgtcaaggatccagacgactgcttcacagaaggctgcgtccggcgctgcccctgc
tgcaccgtggacaccacgcagtcccccgggaaggtgtggtggcggctgcgcaagacctgc
taccgcatcgtggagcacagctggttcgagacgttcatcatcttcatgatcctgctcagc
agcggagcgctggccttcgaggacatctacctggaggagcggaagaccatcaaggtgctg
ctggagtatgccgacaagatgttcacctacgtcttcgtgctggagatgctgctcaagtgg
gtggcctacggcttccagaagtacttcaccaacgcctggtgctggctcgacttcctcatc
gtggacgtctcgctcatcagcctggtggccaacaccctaggcttcgccgagatgggcccc
atcaagtccctgcggacgctgcgagctctccgccccctgagagccctttcacggttcgag
ggcatgagggtggtggtcaatgccctggtgggcgccatcccttccatcatgaacgtcctc
ctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctcttcgcgggg
aagtttgggaggtgcatcaaccagacccagggagacatgcctttgaactacaccatcgtg
aacaacaagagcgagtgtgagtccttcaacgtgactggtgagctgtactggaccaaggtg
aaagtcaactttgacaacgtgggggccgggtacctggcccttctgcaggtggcaacgttc
aaaggctggatggacatcatgtatgcggccgtggactccagagggtacgaagagcagccg
cagtgggagtacaacctgtacatgtacatctacttcgtcgtcttcatcatcttcgggtct
ttcttcaccctgaaccttttcattggtgtcatcatcgacaacttcaaccaacagaagaaa
aagttagggggccaggacatcttcatgacggaggagcagaagaagtactacaatgccatg
aagaagctgggttccaagaagccccagaagcccatcccacggcccctgaacaagtatcag
ggcttcatattcgacattgtgaccaagcaggccttcgacgtcaccatcatgtttctcatc
tgcttgaatatggtgaccatgatggtggagacagatgaccaaagccctgagaaggtcaac
atcttggctaagatcaacctactcttcgtggccatcttcacaggcgagtgtattgtcaag
atggccgccctgcgccactactacttcaccaacagctggaatattttcgacttcgtggtt
gtcatcctctctatcgtgggcaccgtgctctcggacatcatccagaagtacttcttctcc
ccgacgncnnnnnnnnnnnnccgcctggcccgcatcggccgcatcctcagactgatccga
ggggccaaggggatccgcacgctgctgttcgccctcatgatgtccctgcctgccctcttc
aacatcggcctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccaac
ttcgcttacgtcaagtgggaggccggcatcgacgacatgttcaacttccagaccttcgcc
aacagcatgctgtgcctctttcagatcaccacgtcggctggctgggatggcctcctcagc
cccatcctcaacacggggcccccctactgcgaccccaatctccccaatggcagtggctct
cggggcgactgcgggagcccagccgtgggcatcctcttcttcaccacctacatcatcatc
tccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcagcgtggcc
acggaggagagcaccgagcccctgagcgaggacgacttcgacatgttctacgagatctgg
gagaagttcgaccccgaggccacccagttcatcgagtattccgccctgtccgacttcgcc
gacgccctgtcggagccgctccggatcgccaagcccaaccagataagcctcatcaacatg
gacctgcccatggtgagcggggatcgcatccactgcatggacatcctctttgccttcacc
aagagggtcctgggggagtctggggagatggacgccctgaagatccagatggaggagaag
ttcatggcggccaacccgtccaagatctcctacgagcccatcaccaccacgctgcggcgc
aagcacgaggaggtgtcggccacggtcatccagcgggccttccgcaggcacctgctgcag
cgctccgtgaagcacgcctccttcctcttccggcgccaggcgggcagcggcagcctctcg
gatgacgatgcccctgagcgcgagggcctcatcgcctacatgatgaacgagaacttctcc
cagcgcctcgacccgccctccagctcctccatctcctccacgtccttcccaccctcctat
gacagcgtcaccagggccaccagcgataaccttcaagtgcggatgtctgactacagccgc
agcgaagacctcgctgacttccctccctccccggacagggaccgagagtccatcgtgtga
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