Tupaia chinensis (Chinese tree shrew): 102501687 Help Entry 102501687         CDS       T02978                                  Symbol POLR1A Name (RefSeq) RNA polymerase I subunit A   KO K02999   DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup03020   RNA polymerase Brite KEGG Orthology (KO) [BR:tup00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     102501687 (POLR1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tup03021]     102501687 (POLR1A) Enzymes [BR:tup01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      102501687 (POLR1A) Transcription machinery [BR:tup03021]  Eukaryotic type   RNA polymerase I system    RNA polymerase I     Core subunits      102501687 (POLR1A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  102501687 NCBI-ProteinID:  XP_006168445 LinkDB All DBs Position Un AA seq 1714 aa AA seqDB search MLGSKNVPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS KEVCSTCVQDFNHCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL VCQLRVLAVGALQAVYELERILNRFLEENADPSAFEIQEELEQYTAKIVQNNLLGSQGAH VKNVCESRSNLIAHFWKTHMAAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRKAVQKET EPAAPGIEEAQLGKRGYLTPTSAREHLLAIWKNEGFFLNHLFLGLDDVGMESRFNPSMFF LDFLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDIVLIRKLLALMAQEQKLPREVAAL TTDEEKDSSIVMDRSFLSALPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIR QILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ ELRQAVINGPGVHPGAAMVINEDGSRTALSAVDVTQREAVAKQLLTPATGAPKPQGTKIV CRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHF PQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTIRGCFFTREQYMELVY RGLTDKVGRVKLFPPAILKPFALWTGKQVVSTLLINIIPEDHIPLNLTGKAKISGKAWVK DAPRPVPGFDPNSMCESQVVIRKGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVL TCLARLFTAYLQLYRGFTLGVEDILVKSKADVRRHRIIEESTLCGPRAVRAALNLPEAAS CDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMV QSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTG INPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFL YGEDGLDIPKTQFLQPKQFPFLASNYEVIVKSKHLHEVLSRADPQKALHHFRAIKKWQSR HPSTLLRRGAFLSYSQKVQAAVRALNLEGENRNGRSPETQQMLRMWYELDGQSQRKYQKK AAPCPDPCLSTCRPDIYLGSVSETFERKVDDYSQEWAAQAEQSYEKSELSLDRLKTLLQL KWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAN IKTPMMSVPVLNTRKALRRVKSLRKQLTRVCLGEVLEKIDVQESFCMGEKQDKFRVYQLH FQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMESIRKKNSKASAFRNVNTRRATQQDLD NAEESGRIRGEQEGGEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESAEEEETVGE ENDDEDGQEEGSVRGEGAHKAPEQEEDMGSGPEEDSPQKPSRIRGPQGAEAVERRVQAVC EAHPYIAHYQYDTEESLWCEVTVKLPLMKINFDMTSLVVSLAHSTVVYATKGITRCLLNE TTNSKNEKEFVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRVIEKEIK DVFAVYGIVVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATM MGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR NT seq 5145 nt NT seq  +upstreamnt  +downstreamnt atgttgggctccaagaacgtgccctggcggcggctgcagggcatttccttcgggatgtat tcggctgaagagctcaagaaattaagtgttaaatccattacgaacccgcggtacctggac agcctggggaacccatcagcaaacggcctgtatgatttagctttgggtcctgcggattcc aaagaggtgtgctccacctgcgtgcaggacttcaaccactgctctgggcacctgggccac atcgagctcccactcaccgtgtacaaccctctcctcttcgataaactctacctgctgctc cgaggctcttgcttgaactgccacatgctgacctgtccccgggctgtgattcacctctta gtgtgccagctgagggttctggcagttggggccctacaagcagtctacgagttggagcga attctgaacaggtttctggaagaaaatgctgatccttctgctttcgaaatccaggaagag ttagaacaatacacagccaaaattgtgcagaacaacctgctggggtctcagggtgcacac gtgaagaatgtgtgtgagagcaggagcaacctcattgctcacttctggaagacacacatg gctgccaagcgatgtccccattgcaagactgggcggtcagttgtccgaaaggagcacaac agcaaactgacgatcacgtatccagccatggtgcacaggaaagctgtccagaaagagaca gagcctgcagctccgggaattgaggaagcacagttgggaaaacgagggtacttgacaccc accagtgcccgagaacatttgcttgccatctggaagaatgaaggattcttcctgaatcac ctttttttgggactggatgatgttggcatggagtccagattcaatcccagcatgttcttt ctagacttcttggtggtgccaccctcaagatatcgccctgtcaatcgcctgggggaccag atgtttactaatggccagacggtgaatttgcaggctgtcatgaaggacatagttctgatc cgaaagcttctggcactgatggcccaggaacagaagctgccgcgtgaggttgcagcgctc accacagatgaggaaaaagattcctcgattgtcatggaccgatcctttctaagtgccctt ccaggccagtccctcacagacaagctttacaacatttggattcgtctccagagccatgtc aatatcgtgttcgacagtgaaatggacaaactgatgatggaaaagtaccctggcattagg cagatcctggagaagaaggaaggtctgttccgaaagcacatgatgggaaagcgcgtggac tacgcggcccgctcggtcatctgcccagacatgtacatcaacaccaacgagattgggatt cccatggtgtttgctacaaagctgacctaccctcagccagttaccccctggaacgttcag gaactgaggcaggcagtcatcaatggccccggtgtgcacccaggagcagccatggtcatc aacgaggacggcagccgcacagccctgagtgctgtggacgtgacccagcgggaagccgtg gccaagcagctcctgactccagccacaggggcaccaaagccccaggggacaaagattgta tgccggcacgtgaagaatggggacattctcctactgaaccgacagcccaccctgcacaga ccctccatccaggcccatcgtgcccgtatcctgcctgaagagaaagtcctgcggctccac tatgccaactgcaaggcctataacgctgacttcgatggagacgagatgaacgcccacttc ccccagagtgaactgggccgggccgaggcctatgtcctggcctgcaccgatcagcagtac cttgttcccaaagatggccagccattggcaggattgatccaggaccacatggtttcaggt gcaagcatgactattcgaggttgctttttcacccgggaacaatatatggaactggtttac cgaggactcacagacaaagtggggcgcgtgaaactctttcctcctgccatcctgaagccc tttgcattgtggacaggaaaacaggtggtgtcaacactgctcataaacataatcccagag gaccacatcccactgaacttaactggaaaggcgaaaatcagcgggaaagcctgggtgaag gatgctcctcggcccgtccccggctttgaccccaactccatgtgcgagtctcaggtggtc atccggaaaggggagctgctctgcggggtgctggacaaggcgcactacgggagctccgcc tacggcctggtccactgctgctatgagatctacggcggcgagaccagcggcaaggttctc acctgcctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggc gtggaagacattttggttaagtcaaaggcagatgtcaggagacacaggatcatcgaagaa tccaccctctgtgggccccgggccgtcagggctgccttaaacctgccagaagccgcatca tgtgatgaggtccgagggaaatggcaggatgcccatctgggcaaagaccaaagggatttt aacatgattgatctgaagttcaaggaggaagtgaaccattatagcaatgagattaataag gcatgcatgccctttggcctgcacagacagttcccagagaacaacctgcagatgatggtg cagtcgggagccaaaggttccaccgtgaacacgatgcagatctcatgcctgcttggccag attgaactggaaggtcggagacccccgctcatggcatctggcaagtcactgccctgcttc gaaccctatgaattcacccctagggctggcggctttgtcactggcagattcctcaccggc atcaaccctcctgagttcttctttcactgcatggcagggcgagagggcctggtcgacacc gctgtgaaaactagccgctccggctacctccaaaggtgcatcatcaagcacctggagggg ctggtcgtccagtacgacctgaccgtccgcgacagcgatggcagcgtggtgcagttcctg tacggggaagatggcttggacatccccaagacacagttcctgcagcccaagcagttcccc ttcctggccagcaactacgaggttatagtaaaatcgaagcatctccatgaagtcttatcc agagcagatccccaaaaagctctgcaccatttcagagccatcaaaaaatggcagagcagg caccccagcaccctgctgagaagaggcgccttcctgagttactcccagaaagtccaggca gctgtgagagccttgaacctcgagggcgagaaccggaatggccgcagccccgagactcag cagatgttgaggatgtggtatgagttagatgggcagagccaaaggaaataccagaagaag gccgctccttgtcccgacccctgtctgtccacctgccgcccagacatctacttagggtcg gtgtcagaaacgtttgaaagaaaggttgatgactacagtcaagagtgggcagctcaagca gagcaaagttacgagaaatccgagctttctctggacaggttgaagaccctgctgcagctg aagtggcagcgctcactttgtgacccgggcgaggccgtgggcctgctggccgcccagagc attggggagccctccacacagatgaccctgaacaccttccacttcgcaggccgaggcgag atgaatgtcaccctgggcattccgaggctgcgggagattctcatggtggccagtgccaac atcaagacgcccatgatgagtgtgcccgtgctcaacaccaggaaagccctgaggagggtg aagagcctgaggaagcagctcaccagggtgtgcttaggggaggtgttggagaagattgat gtccaggagtccttctgtatgggagagaaacaggacaaattccgggtgtaccagctgcac tttcagttcctgccacacgcgtattaccagcaggagaagtgtctgaggcccgaggacatc ctgcacttcatggaaacaaggttctttaaacttctgatggagtccatcagaaagaagaac agtaaagcatcagccttcagaaatgtgaacacccgaagagctacccagcaggatttggac aacgctgaggagtcagggaggattcggggcgagcaggaaggcggtgaggaagaagagggg cacatcgtagacgccgaagctgaggagggggacgctgatgcttctgatgccaaacgcaag gagaagcaagaggaggaggtcgattacgagagcgcagaggaggaggagacggtgggcgag gagaatgacgatgaggacggacaggaagaaggcagcgtccgtggtgaaggcgcccacaag gccccagagcaagaggaggacatgggctcaggccctgaagaggactcaccccagaagccc tcccgcatccgggggccccagggagctgaggccgtggagcgccgggtccaggccgtgtgc gaggcccacccgtacatagcacactaccagtacgacaccgaggagagcctgtggtgtgag gtaacagtgaagctccctctaatgaagattaactttgacatgacctccctggtcgtgtcc ttggcccacagcaccgtcgtctacgcgaccaagggcatcactcggtgcctcctgaatgaa acaaccaacagtaagaacgagaaggagtttgtgctgaacacggaaggcatcaacctcccg gagctgttcaagtatgccgaggtgctggatctgcgccgcctctattccaacgacatccac gcgatggccaacacgtacggaatcgaagccgcactgcgggtgatcgagaaggagatcaag gacgtgttcgccgtgtatggcattgtggtcgatcctcgccacctctccctggtcgctgac tatatgtgcttcgagggtgtctacaagcctctgaatcgctttgggatccggtcaaactcg tcccctctgcagcagatgacgtttgaaaccagcttccagtttctgaagcaggccaccatg atgggatcccatgatgagctgaggtccccttcagcctgcctcgtggtggggaaggtcgtc aagggcgggacaggcctgttcgagctcaagcagcccctgcgatag

DBGET integrated database retrieval system