Tupaia chinensis (Chinese tree shrew): 102501765
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Entry
102501765 CDS
T02978
Symbol
SCN2A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102501765 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tup04040
]
102501765 (SCN2A)
Ion channels [BR:
tup04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102501765 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
FraC
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
102501765
NCBI-ProteinID:
XP_006160308
LinkDB
All DBs
Position
Un
AA seq
2005 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPFYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITAFFNNSL
DGNGTTFNRTVNMFNWDDYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASTESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHKHGERRHSNVSQASRASRLMPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSIASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGDMFDVSV
VNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIIIQRAYRRY
LLKQKVKKVSCIYKKDKGKECDGTPIKEDVIDKLNENSTPEKTDMTPSTTSPPSYDSVTK
PEKEKYEKDKSEKEDKGKDIRESKK
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtacctccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaggag
cgcaaggatgaggatgatgaaaatggcccaaagccaaatagtgacttggaagcagggaaa
tctcttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccgttctatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ctagctattaagattttggtacattctttattcaatgtgctcatcatgtgcaccattctt
accaactgtgtatttatgaccatgagtaatcctcctgattggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttattaaaatactggcaaggggcttttgt
ttagaagacttcacatttctgcgggatccatggaattggttggatttcacagtcataaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggtctaaagaccattgtgggggcc
ctgatccagtcagtgaagaagctttctgacgtaatgatcctgactgtgttctgtctgagc
gtgtttgcactaataggactacagttgttcatgggcaacctacggaataaatgtttgcaa
tggcccccagataattcttcctttgaaataaatatcactgctttttttaataactcattg
gatggaaatggtactactttcaataggacagtgaacatgtttaactgggatgactatatt
gaagataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaacccc
aactatggctacacgagctttgacacctttagttgggccttcttgtctttatttcgtctc
atgactcaagatttctgggaaaacctttatcaactgacactacgtgctgctggaaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctaccttataaatttgatc
ctggctgtggtggccatggcctatgaggaacagaaccaggcaacactggaagaggcagaa
cagaaagaagctgaatttcagcagatgcttgaacagttaaaaaagcaacaggaagaagct
caggcagcagctgcagcagcatctactgagtccagagacttcagcggtgctggtgggata
ggtgttttctcagagagttcttcagtggcatcaaagttgagttccaagagtgaaaaagaa
ctgaaaaatagaagaaagaaaaagaaacagaaagagcagtctggagaagaagaaaaggaa
gatggagtccgaaaatctgaatctgaagacagcataagaagaaaaggtttccgtttttct
ttagaaggaagtaggctgacgtatgaaaagaggttttcttctccacatcagtctttactg
agcattcgtggctcccttttctctccacgacgcaacagtagggctagccttttcagcttc
agaggtcgtgcaaaggacattggctctgagaacgactttgcagatgatgagcacagcacc
tttgaagacaatgacagtcgaagagattccctatttgtgccacacaaacacggagaacgg
cgccacagcaatgtcagccaggccagccgggcctcccggctgatgcccatcctgcccatg
aatgggaagatgcacagtgctgtggattgcaatggtgtcgtctctctggtggggggcccg
tctgcccttacatctcctgctggccagctcctgccagagggcacaactactgaaacagaa
ataaggaagaggcggtctagttcttaccatgtttccatggatttgttggaagatcctaca
tcaaggcaaagagcaatgagtatagccagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgttggtacaaattcgctaacatgtgtttgatttgg
gattgctgtaaaccatggttaaaggtaaaacaccttgtcaacctggtcgtgatggacccc
tttgttgacttggccatcaccatctgcattgttttgaatacactcttcatggccatggag
cactatcccatgacggagcagttcagcagtgtgctatctgttgggaacctggtcttcact
gggatcttcacagcagaaatgttcctcaagataattgccatggatccatattattacttt
caagaaggctggaatattttcgatggttttattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggactgtcagttcttcgatcattccggctgctccgagttttcaag
ttggcaaaatcttggccaacactgaacatgctgataaagatcattggcaattctgtgggg
gccctagggaacctcaccttggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctcttcggtaagagctacaaagaatgtgtctgcaagatctccaatgattgtgaa
cttccacgctggcacatgcacgacttcttccactccttcctcattgtgttccgtgtgctg
tgtggagagtggatagagaccatgtgggactgtatggaggtcgccggccaaaccatgtgc
cttactgtcttcatgatggtcatggtgattggaaacctagtggttctgaacctctttctg
gccttgctcttgagttccttcagttctgacaatcttgctgccactgatgatgataatgag
atgaacaatcttcagattgctgtgggaaggatgcagaaaggaattgattttgttaaaaga
aaaatacgcgaatttattcagaaagcctttgtcagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaacaacaaaaaagacagctgcatttccaaccataccaccata
gaaataggcaaagaccttaattatctcaaagatggaaacggaactaccagcggtataggc
agcagcgtagaaaagtatgtcgtggatgaaagtgattacatgtcatttataaacaacccc
agcctcactgtgaccgtaccaattgccgttggagaatctgacttcgaaaatttaaatact
gaagaattcagcagcgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgacataggagctcccgctgagggagaacagcctgaggtt
gaacctgaagaatcccttgaacctgaagcctgttttacagaagattgtgtgcgaaagttc
aagtgttgtcagataagcatagaagaaggcaaaggaaaactttggtggaatttgagaaaa
acttgttataagattgtggagcacaattggtttgaaaccttcattgtcttcatgattctg
ctcagcagtggggctctggcctttgaagacatatatattgaacaacgaaaaaccattaag
accatgttagaatatgctgacaaggttttcacttatatattcatcctggaaatgctttta
aagtgggtagcatatggttttcaaatgtattttaccaatgcctggtgctggctagacttc
ctgattgttgatgtttcattggttagcttaacagcaaatgccttgggctactcagaactt
ggtgccatcaaatccctcaggacactaagagctctgaggccactgagagccttatcccgg
tttgaaggaatgagggtcgttgtaaatgctcttttaggagccattccctctataatgaat
gtacttctggtttgtctgatcttctggctaatattcagtatcatgggagtgaatcttttt
gctggcaagttttatcactgtattaattacaccactggagacatgtttgatgtaagtgtg
gtcaacaactatagtgaatgccaagccctcatagagagcaatcaaactgccaggtggaaa
aatgtgaaagtaaactttgataatgtgggacttggatatctttctctgctacaagtagcc
acatttaagggatggatggatatcatgtatgcagctgttgactctcgaaatgtagaattg
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatcttcattattttt
ggttcattcttcaccctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatattacaat
gcaatgaaaaaactgggctcaaagaaaccacaaaaacccattcctcggcctgccaataaa
tttcaaggtatggtctttgactttgtaaccaaacaagtctttgacatcagtattatgatc
ctcatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacatcctgtactggattaacctggtgtttattgttctgttcactggagaatgtgtg
ctgaaactcatctctcttcgttattactatttcaccattggatggaatatttttgacttt
gtggtggtcattctctccattgtagggatgtttctggctgagctgatagaaaagtatttc
gtgtcccctaccctgtttcgagtgatccgtcttgccaggattggccgcatcctgcgtctg
atcaaaggagcgaaggggatccgcacgctgctctttgctctgatgatgtcccttcctgct
ctgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaactttgcctacgttaagagggaagttggaattgacgacatgttcaacttcgagacc
tttggcaacagcatgatctgcctgttccaaatcaccacctctgctggctgggatggattg
ctagcccctattcttaacagtgggcctccagactgtgaccctgaaaaagatcacccggga
agctcagttaagggagactgtgggaacccatctgtcgggattttcttttttgtcagttac
atcatcatatcctttctggtggtggtgaacatgtacattgcggtcatcttggagaacttc
agtgttgctactgaggaaagtgcagagcccctgagtgaggatgactttgagatgttctat
gaggtttgggagaagttcgatccagatgcaactcagtttatagagttctccaagctctct
gactttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggagacaggatccactgcctggacattttattt
gcctttacgaagcgagttttgggcgagagtggagagatggatgcccttcgaatacagatg
gaagagcgattcatggcttcaaacccttccaaagtctcttatgagcccatcacaaccact
ttgaaacgcaaacaggaggaggtgtccgctatcattatccagagggcttacagacgctac
ctcttgaagcaaaaagttaaaaaggtttcttgtatttataagaaagacaaaggcaaagaa
tgtgatggaacacctatcaaagaagatgtcattgataaattaaatgagaattcaactcca
gagaaaaccgatatgacaccttccaccacttctccaccttcatatgatagtgtaaccaaa
ccggaaaaagaaaaatatgagaaagacaaatcagaaaaggaagacaaagggaaagatatc
agggaaagtaaaaagtaa
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integrated database retrieval system
