Tetranychus urticae (two-spotted spider mite): 107363469
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Entry
107363469 CDS
T04901
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107363469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tut03019
]
107363469
Messenger RNA biogenesis [BR:
tut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107363469
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107363469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
GIDA_C_1st
Motif
Other DBs
NCBI-GeneID:
107363469
NCBI-ProteinID:
XP_015786178
UniProt:
T1KFW3
LinkDB
All DBs
Position
Unknown
AA seq
2652 aa
AA seq
DB search
MMNQDSLQFALNAVSNIVHNSINRKNYKQQLSELQKFVNKFGFECERHLYRCIFDSLLAT
QHTDTLKNSILCQLFSDLGSFFEKPNFSTLIRFSFNKGPFKNKISDSSNTESNTADCSSV
GNSLNGASNNNRSQESSGAAGVTQNNSSDLSVVNKVRELCKCLKLNDTHKLALLLCLDEL
DSAEREVQLSKCDFISIPELTYFMLSQLHSSKEPFAKESIEKIKEDLEASGNHISKDKFL
PIDSPFCDSVEMESNSFGNLSGLSDDQITNMLVNENDVQLSSELMSQFDITPKLCAKILL
ALCEHPKGQDNNLPQRFEEIDTLANLCREFLPSASPLMDILQEIDSETFVNISSKMINNK
HFGKIHPVFSRFWQFCSNLCNTEKQGISLLGMIFFGRLWSNNLEFQLGVIMNCVRNQLVV
KLLSAGPTGPGPGGGNDLSQLVPNLESLKCLPDFEGNPELSNWKYQKLYSIIIEISAANS
SNKQSVTMGSMFYNQIIDLFKWPIHHCPDLVALGLLGCGSVSSICKNDILNMTIPSFLSN
HPNAAIILHTIWSTNDLIGNVQNNCQWAKQVLLQSMCEFYMKSPPEEQQQRLSRILDVAQ
DLKALSLLLNSNCHPFVIDLACLASRREYLKLDKWLMDKIESHGEPFVKACIVFLNRRCN
ALVSGNKTLDVNSLNSALPSETLATILACLQQFICNSASSVTPTSLSQQFPVSPELSETI
LTMVANSSYLLSKTPRSAPPGVISNNVKTPILPTVTSLSDLNDRIGSLTLTGSANSFSQS
RQPFITPSSQSSITPIASTTSIMTPQMQPPVGPKSQKSGQPQASLQPHQQASQQQQSQRG
YVFNVNAIFPETQMVVNPEIEKEADTYFQRIYNQSTTGSMSIDDVLEMLRRFQDSPNKRE
RDIFNCMIKNLFKEYCYFPQYPDKELLITAQLFGGIIQMGLVKYMALVVALRCVLEALRQ
PYSSKMYFFGIAALDRFKSKLKEYPLYCQHLTSIPHFNEFPRPLQEYIQYGASSEDPPSA
RSLPDVVANPAVSAHSPAPGQLNSALPGLIGSYIGNNINSESNRPVMMMSGMLNNSNNIS
NIGSQGITGPIGGQLSQVPSKIFSTSMSSQALINKPITSTPVITTSSTTRSGPSIANATN
IDTLLAAGETIHSIPPESMQDKVGFIINNLSQMNLAQKTEEFKELIGTDDTYHGWIAQYF
VQRRASIENNFHTLYANFLELLKLPELTKLVIRETYRNIKVLLRSDKVIANMGDRTLLKN
LGHWLGMLTLAKNKPILSIDLNLKFLLIEAYHKGTQELLYVVPFIAKVLESCAKSTVFKP
PSPWTMGILKALVELHQEREVKLNLRFEVEVLCRTLNVDINELVGKTTILQEEDIMNKVM
MEQQLGTAGGRQHQSHISSIGLNQANDTLSNSVQNQMHIAQSQSSQGSVSVQQSISSQPP
ISHSSQIIKPPLTQPQSHLPNRLSMSMLSQPLVVGQQSATHSLLQPNSSPTVQIGPIHMP
PTASIPMTPTSSVSPAVQQFNYHDISTNISAIGPHIVTRNDLPLIQLNPNLKIFIKLSVE
RSIQEWVGPVVERSNKISLTTAEQIIKKDFALESDENKMCLAAQYLIRNLTAGMAMITSK
DALYGTMVTHLVQAFTRQLGPNSGVTKEMIEESANAIASSNINLACCFIQKTAIEKAIPE
LDKRLQHEYDIRRKARLEGRRYCDASSLTYQAERMPEAIRLKVGSVTPLQFQVYEDIGKN
IPGFISPIVDHSNMGIASSMNNSLPNIGGSIGSTGPSLTNSIGMDQPFLKSLTSNVLPTV
AAMSNSISANINVQPPLFSQQLSGFGPENSSNSIDTGLQTLYDKLVNELDSLFQQFVASM
QPSMLITTMHSILEMVSASRNNPSNIGSAVNLIQRILEALAELIISVESGVVEVLLLTRA
RDLYLVILKALSDPRAYGAQFTTKQITRQVLDRLLSSSTPPLPDDLFDILMRSELINISY
VDATLAQQIDGANPIALAFALQFVKLYGMDLSETQIPNIIAALLKISKSSGPTNPLNLEI
QTSLDVFRTSNAPSALNPSDGSNFLMSSAMSVASREVESDSELLEKTERLMRDWINLYHS
NTPPNKVFHIYVQSMNQHGILKTDDSITRFFRLSTELCVDNCYRILNGQHANNASVLEAR
TKCFQTLDAFAHLIVMLVKHSGSNTGSMSESTPKINLLNKVLGIIGGVAIHDQEIRNEEF
QHLPYYRILIILLMELTLGPNNLGLPAMNNFQHQLGFGINPSQVDPLYESIQYQVLNAFC
QTLKLLKPSKAPSFAFAWLDFIGHRIFMEKCLNGPNSTPSIISTKGWIFYAPLLIEIIKF
LAPFLRNVELPHSIDLLYKGTLKVLLILLHDFPEFLCEYCYELCDAIPPNAIQMRNLVLS
AFPRNMRLPDPFTPNLKIDSLPEIIQSPKGASNTLSALATVPFRKELDSYLRTRSPVTFL
CELRGYLQNPNGSDGNRYNIPLINALVLFVGQSAIQAITPKHISMSSIAHSSHMDIFQNL
AVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYIFAESNTEAIQEQITRVLLERLIV
NRPHPWGLLVTFIELIKNQSFKFWNHEFVRCAPEIEKLFESVARSCMQQQQKNQGTGNSG
QISAELVRSQSS
NT seq
7959 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcaagattctcttcaatttgcccttaatgctgtgtccaatattgtccataat
tcaataaatcggaaaaattacaaacaacaattaagtgaacttcaaaagtttgttaataaa
tttggatttgaatgtgaaagacatctctatcgttgtatattcgattcattgttggcaacc
cagcacaccgatactcttaaaaattcgatcctttgtcaactcttctcggatcttggttca
ttttttgagaagcctaatttttcaactctaatcagattttcttttaataaaggccctttt
aaaaataaaatcagtgacagtagcaatactgaaagcaacaccgctgactgttcatcagtt
ggaaactccttaaacggagctagtaacaacaatcgttcccaggaatcttctggagctgct
ggtgttactcagaataactcaagtgatctaagtgttgttaacaaagtccgagagctttgt
aaatgcttgaaattgaacgatacacataaattagccttgctcttgtgtttagatgaactt
gattcagctgaacgagaagttcaattgagcaagtgtgatttcatcagtatcccagagtta
acatattttatgttatcgcaattgcattcaagcaaagagccttttgccaaagaaagtata
gaaaaaattaaagaagacttggaagctagtggaaatcatatttctaaagataaatttcta
cctatagattctccattctgtgatagtgttgagatggagtccaattcttttggtaatctt
tctggtctctcagatgaccaaataaccaatatgctggtcaatgaaaacgatgtccaatta
agttcagagctgatgagtcaatttgatattacacctaaactttgcgccaagattttgtta
gcactgtgtgaacatcccaaaggccaagataacaatctaccccaaaggtttgaggaaatt
gacactctagcaaatttgtgtcgcgagtttctaccttcagcctcacccttaatggacatc
cttcaagaaatagactctgaaacatttgtaaacataagtagcaaaatgatcaataataag
cattttgggaaaatacatccagttttctccagattctggcaattttgttccaatctttgc
aataccgaaaaacaaggtatctctcttttaggaatgatcttcttcggtagactttggtcc
aataacctcgaattccagttaggagttatcatgaactgtgttagaaatcaactagtggtt
aaattactgtcagctggtcccacaggtccaggtccaggcggtggtaatgatctaagtcaa
ttggtacctaacttggaatctctcaagtgtctacccgactttgaaggcaaccccgagctt
tcaaattggaaataccaaaaactctattcgatcattattgaaataagtgctgccaactcc
tcaaataaacagtcggttactatgggttccatgttttataatcaaatcatcgacctgttt
aaatggccaattcatcattgtcctgacctagtagcccttggtttgcttggatgtggaagt
gtctcatccatttgtaaaaatgatattcttaacatgacaattccatccttcctcagcaac
catccaaacgccgccataattttgcacaccatttggagtacaaatgatttgattggcaat
gttcaaaacaattgtcagtgggctaagcaagtacttcttcaatccatgtgcgagttttac
atgaaaagtccacctgaagaacaacaacaacgattgtctagaattttggatgtggctcaa
gatcttaaagcacttagtctattgcttaatagcaattgccatcctttcgtaattgacttg
gcttgcctagcatctagaagagagtacctcaaattagataaatggttaatggacaaaatt
gaatcacacggtgaaccatttgtgaaagcctgtatagtgttcctaaatcgtcgttgcaat
gcactcgtcagtggtaataaaacattggatgttaactcattaaactcagctttaccatct
gaaactctcgccacaattttggcctgcttacagcagtttatctgtaattccgctagctca
gtgacacctacctcgctctcacaacaatttcctgtatcaccagaacttagcgaaacgatt
ctgaccatggtagcaaactcttcataccttttatcgaaaactccccgatcagcacctccc
ggtgtaattagtaacaatgtcaagactccaattcttcccactgtgacttcacttagtgac
cttaacgatcgaatcggtagtctgacattaactggctctgccaactcattcagtcagtct
cgacaaccatttattacaccatcatcccagtcatcaataactccaatagcatctacaaca
tccataatgactcctcaaatgcaaccacctgttggtcctaaatctcaaaaatccggacag
cctcaggcatctttgcagcctcatcaacaagcttctcaacaacaacagtctcaaagaggt
tatgtcttcaatgtaaatgccatttttcctgaaactcagatggttgtcaatccagaaatt
gagaaagaagctgatacctatttccaaaggatctacaatcagtcaactactggaagtatg
agtatcgatgatgttctggaaatgctgaggagattccaagactcacctaataaacgtgaa
agggatatattcaactgtatgataaaaaatctgttcaaagaatactgctatttccctcaa
tatccggacaaagagcttctcattaccgcacaactattcggtggtataattcaaatgggc
ttagttaaatacatggctttagttgttgccttaagatgcgtgcttgaagcccttcgtcaa
ccttacagtagcaagatgtacttttttggtattgctgctttagataggtttaaatcaaag
cttaaagagtatcctctctattgtcaacatttaacttcgatacctcatttcaatgaattt
cctcgtcctcttcaagagtatatccaatatggtgcttcatctgaagatccgccctctgct
cgatctcttcctgatgttgtagctaatcctgctgtgtcagctcactctcctgctcctggt
caattgaattccgctctaccgggtctcataggctcctatattggtaacaatattaattcc
gaatcaaaccgccccgttatgatgatgtctggtatgcttaacaattcaaacaacattagt
aacattggctctcaaggaataactggccccattggtggacagttatctcaagttccatct
aaaatattctcaacctctatgtcaagtcaggctttaatcaataaaccaataacctcaact
ccggtcattactacatcatcaacaacacgaagtggaccttcaattgcaaatgcaactaac
atagatactttattagctgctggtgaaacaattcattctattcctccagaatcaatgcaa
gataaggttggtttcataatcaataacctttctcagatgaacttagcacaaaagactgaa
gaattcaaagaattaatcgggaccgacgacacttatcatggttggattgctcaatatttt
gtccaaagacgagctagtattgagaataacttccataccttatatgccaactttttagag
ctgcttaaactaccagaattgactaaattggttattagagaaacttatcgaaatatcaaa
gttctattgcgaagtgataaagtcattgctaacatgggtgatcgaaccttgctgaagaat
cttggccattggttaggaatgttgactttggctaaaaataagcctatcttatccatcgat
ttgaatcttaaatttttgcttatcgaagcttatcacaaaggcacacaagagctactttat
gttgttccattcatcgcaaaagtattggaaagctgtgctaaatctactgtattcaaacca
cctagtccttggactatgggtatacttaaagctcttgttgagcttcaccaagaaagagaa
gtcaaattgaacttgcgattcgaagtggaagtcctctgtcgaacccttaatgttgacata
aatgaattggttggtaaaactacaatcctccaagaagaagatattatgaataaagtaatg
atggagcagcagttaggaactgctggaggacgtcaacatcaaagtcacattagttccatc
ggcttgaatcaagcaaatgacactctgtctaattcagttcaaaatcaaatgcatattgct
caatctcaatcttctcaaggttcagtttcggttcaacagtctatttcaagccaacctcca
atatctcattcaagccaaattatcaagccaccgctgactcaaccgcaatctcatttacct
aatcgtttatccatgtctatgttatcacagccattagttgttggacaacagtcagcaacg
cattcattacttcaaccaaattcatcacccaccgttcaaattgggcctattcatatgcca
cctactgcttcaataccaatgacaccaacttcatcagtcagtccggctgtccaacagttc
aactatcacgatatctcaacaaatatttcagctatcggacctcatattgtaacacgtaac
gaccttcctctaattcagcttaatccgaatctcaagattttcattaagctctcagtggaa
agatccattcaagaatgggtaggaccagttgttgaaagaagtaacaaaataagcttgaca
acagctgaacaaataatcaaaaaagattttgctctcgaatcagatgaaaacaaaatgtgt
cttgctgctcagtatcttatccgtaatcttacagctggcatggctatgattacgagtaaa
gatgccctttacggtactatggtcactcatcttgtacaagctttcactcgccaattggga
ccgaacagtggagtaactaaagaaatgattgaagaatcagctaatgcaatagctagtagc
aatatcaaccttgcttgctgtttcattcaaaagactgcaattgaaaaggccattccagaa
ctggataaaagactccaacatgaatatgatattcggcgtaaagctagacttgagggtcgt
cgatattgtgatgcaagttcattaacttatcaagctgaacgaatgcctgaagctattcgt
ctaaaagtaggctcagtaactcctcttcaattccaagtttatgaagatataggtaaaaat
atcccaggatttatttcacctattgtggatcattctaacatgggcatagcttcatcaatg
aacaactctcttccaaatattggtggatctattggatccactggacctagtctaactaac
tctattggaatggatcaaccatttttgaaaagtctcacaagcaatgtattaccaacagta
gctgccatgtccaactcaatctctgctaatatcaatgttcaaccacctttgttttctcaa
caactttcgggcttcggacctgaaaactcttccaatagcattgatactggcttacaaacc
ctttatgataaattagtcaatgaattggattctctattccaacaattcgttgcatcgatg
caacctagtatgcttataactaccatgcactcaatattggaaatggtcagtgcttcaaga
aacaatccaagcaacattggaagtgccgttaatttaatccaaagaattttagaagctctc
gctgaattgataattagtgttgaatctggagtcgttgaagttctactccttactcgagct
cgtgacctttatttggtgattctaaaggctctatcagatcctagagcttatggcgctcaa
tttaccaccaaacaaatcactcgacaagttttggatcgccttctcagctcttccactcca
cctttaccggatgatttatttgatatacttatgcggtcagagttgattaatatctcatat
gttgacgctactttagcccagcagattgacggtgcaaacccaatcgcattggcattcgca
ctacaattcgtgaaactttatggtatggacctcagtgaaacacaaattcctaacatcatt
gcagctttactgaagatcagcaaatcatctggtcctaccaatcctctaaatctcgagatt
caaactagcttggatgttttccgaacatcaaatgcaccatcagctctgaatccttcagat
ggatccaatttcttgatgagctcagcaatgagcgttgcctctcgtgaagttgaatcagac
tctgaattattggaaaagaccgaaagattgatgagagattggattaatttatatcattct
aatactccacccaacaaagtttttcacatctatgtacaatcaatgaaccaacatggtatt
ctcaaaacagatgattccattacacgatttttccgactttcaactgagctttgtgtagac
aactgttacagaatcttaaatggtcagcatgctaataatgcatctgtcttggaagctcgt
actaaatgtttccaaacacttgacgcgtttgcacacctcattgtgatgcttgttaaacat
agcggctcaaacactggatctatgtccgaatcaactccaaagatcaatttactgaacaaa
gttttgggtataattggaggtgttgcaattcatgaccaagaaatccgaaatgaagagttt
caacatcttccttattatcgtatcttgattattctgctgatggaattgactctcggtcca
aacaacttaggtttacctgctatgaacaacttccagcatcaattaggatttggtatcaat
ccaagtcaagttgaccccctttacgaaagtattcaataccaagttctcaatgctttctgt
caaactttgaagcttcttaaaccgagtaaagcaccttcttttgcatttgcctggcttgat
ttcattggacatcgcattttcatggaaaagtgtcttaacggaccaaattcaactccgagc
attatctcaactaaaggatggatattttatgcacctctattgattgagataatcaaattc
ttggctccattcttaagaaatgttgaattgcctcattcaatcgatcttctttacaagggt
acactcaaagttctactcatcttgcttcatgatttccctgaattcctgtgtgagtattgt
tatgagctttgtgatgctattccacccaatgcaattcaaatgagaaatctggttctcagc
gctttccctcgtaatatgcgattgcctgatccattcacaccaaatctcaagattgactca
cttccagagattatccaatctcctaaaggagcatcaaacactttatctgctctagcaact
gtaccattcagaaaagaacttgattcttacttgagaacacgaagtcctgtcactttccta
tgtgaactcagaggttatcttcaaaatcctaatggttctgatggtaatcgctacaacata
ccattgattaatgctttggttctctttgtcggtcaatctgctattcaagccattactcca
aaacacatatccatgtctagcattgctcattcatcacatatggatattttccagaattta
gctgtagatttggacactgaaggtcgatatttattccttaatgcgatagctaatcagtta
cgatatcctaactcacatacacactactttagctgtactcttctttacatctttgcggag
agtaatactgaagccattcaggagcaaattactcgagttcttttggagagactcatcgta
aatcgtccacatccatggggtcttttggtaacctttattgaactaattaaaaaccaatca
tttaaattttggaatcacgagtttgttcggtgtgcacctgaaattgaaaaattattcgaa
tctgttgctcgaagctgtatgcagcaacaacaaaaaaatcaaggcaccggcaactctggt
caaatttctgcggagcttgttcgctcacaatcatcataa
DBGET
integrated database retrieval system
