Trichomonas vaginalis: 4758319
Help
Entry
4758319 CDS
T01022
Symbol
TVAGG3_0551580
Name
(RefSeq) mRNA 3'-end processing
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4758319 (TVAGG3_0551580)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4758319 (TVAGG3_0551580)
Enzymes [BR:
tva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
4758319 (TVAGG3_0551580)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
4758319 (TVAGG3_0551580)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
nSTAND3
AAA_22
ATP_bind_1
AAA_25
CLP1_N
FtsK_SpoIIIE
Haem_oxygenas_2
WCX
Motif
Other DBs
NCBI-GeneID:
4758319
NCBI-ProteinID:
XP_001313427
UniProt:
A2F3N0
LinkDB
All DBs
Position
II:complement(15722140..15723371)
Genome browser
AA seq
398 aa
AA seq
DB search
MQTTTTTTDPIRKRFDSDSEARFLLTPGQSITLSVDSGSVFYNGWQLPETGQVVFRDKDF
TLMSYKDSYTLKFMGKLPRFYAAKRIPQESVPAYDLISQKSVVAVCGPPLSGKTTACQTI
INSALHGVPQHPKEKPIPIYVNLDPAQAPFCPPGSIGALPITKPIDNTGFKIENPLTYFF
GHTEIDEAHRDRYTDLVHELATYVKQRRQAISQSDGGVVIDLPSPTNEHVLPGIAQAIKD
FEVTHIVCIGDDRLVATFQRSFPWISVWGMPALGAAHDDEISIRTAQRSLDTKRYFDGDD
SADLVSMTYRFTNRDDFKLYKVDKREPEEVPISTSLMASVVAIVQRPHVSNELWKQNVLG
YLTITKVQNEDNIEVLKPKQPLPNNVQFIIGSIKYFIK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacaactactacaacagacccaatacgtaagcgatttgatagcgacagtgaa
gcaagatttctattaacaccaggacagagcattactctatcggttgacagtggatctgtt
ttttacaatggttggcagctaccagaaacaggacaagttgtttttcgtgataaagacttt
acccttatgtcatacaaagacagttatacattgaaattcatgggaaagcttccgagattt
tatgctgcaaaaagaatacctcaagagtctgttcctgcatacgatttaatcagtcaaaaa
tcagttgttgctgtttgtggaccaccactctcaggaaaaactactgcttgccaaacaatt
atcaactcagctcttcatggagttccacaacatcctaaagaaaagccaattcctatttac
gtaaatcttgaccctgcccaggctccattttgccctcctggatcaattggtgcccttcca
attacaaaacctatcgataataccggatttaagattgaaaatccactcacatatttcttt
ggacatacagaaatagacgaagctcatcgtgatcgctacacagatcttgttcacgaactt
gcaacgtatgttaaacaaagaagacaagctatctctcaatctgatggtggagtagtcata
gatttaccttctcctactaatgagcacgttcttccaggaattgctcaagcaattaaagat
ttcgaagttacacacattgtttgcatcggagacgatcgtcttgttgcaacatttcaacgt
tcgttcccttggataagcgtttggggaatgccagctttaggtgctgctcatgatgacgaa
atttctataagaaccgctcaaagaagcctcgatacaaagagatatttcgatggtgatgat
tctgctgatcttgtttcgatgacttacagatttacaaatagagatgacttcaaattatac
aaagttgacaaaagagagcccgaggaagtgccaatatcaacttctttgatggcttctgtg
gtagcaattgtacaaagaccacatgtttcgaatgaattatggaaacaaaatgttttggga
tatttaacaattactaaggtccaaaatgaagataatattgaagttttgaagccaaagcaa
ccattgcctaataatgtacaattcattattggttcaatcaaatattttatcaaataa
DBGET
integrated database retrieval system
