Trichomonas vaginalis: 4773112
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Entry
4773112 CDS
T01022
Symbol
TVAGG3_0839590
Name
(RefSeq) tetratricopeptide repeat protein 37 family
KO
K12600
superkiller protein 3
Organism
tva
Trichomonas vaginalis
Pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4773112 (TVAGG3_0839590)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4773112 (TVAGG3_0839590)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
4773112 (TVAGG3_0839590)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_8
TPR_16
ANAPC3
BTAD
TPR_11
Sel1
Motif
Other DBs
NCBI-GeneID:
4773112
NCBI-ProteinID:
XP_001327334
UniProt:
A2DWS9
LinkDB
All DBs
Position
VI:complement(10410238..10413443)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSKDQIQRDKRLIDGGLTDAKQYIAEKKYDECKKILSRITPTARRLEYHVFETCFMTCMM
HMKTENYAEARKFAEECTRLKPDDALPWKSLIQIDIDSKSTNLLNTITRALEICQPDLAI
LKQIAPHLIPLDDENLINQFVRLLDSVDGALMLPITAMLPETPNTLDIRLKMLKLQAPKD
LQACSRLIHTILEESDIFQAPHWIQTLPIDNQDRIYVETLFGDEPLQSAEKHIAGGSYIF
KDFVRAAKKRDLTLLRNSLMVIPPFVSGWMYYINLINDPTVRLQAINDAIMKFPNYVPLL
VKLSETKEELGDTQSAINIINEIIKNDPCKGTPLLIRILIRLGRGQEAEKLLEDDVHNVI
TQEERTMIDLLMYRHDKNKKRLQNILNCKSDSPKIIVAKAEAAYNMIDELGDACEKYFID
AMKADKNDPRGYLYFGKFLLEYKKDEEKAVFLFQKAYDLGLEDKSALEMTSRNLAKQGKF
EESLNLCQKVDSDWSHFRAGLILQKLGRHEEACEEFQKDLKFNPERRTSWSALGQSYVVL
GRAKAAMSVAQEIRKHGEPDLDLEFQLNSLFEAPLEWKEEYSLKENPLRFTAYLQQVITK
LRMFQRFGRFETCHFLTLNVLPLVREFVQIWGSQSSVLKLCGDYFVEEFLIEKDKSFLNE
GQVCFMKRCEIDRRAEAFIDLARVLNLKDLPDQATLVLRRAVKSFTDHSGVWMSLGISFA
LSKQYSYARHCLCVAAKLATSMEMARSYACVAAIALLIDDEKLLDTATNAARSFNPYDPD
VWQILIKTEKVNRFDASKIAFEFGSSRLIIPNLPLFALMSGETSDALNFSFMGEDTNAIS
FAFEALKKYDFALLFANKDDKERIERLNLLNSKSKISKIDKKEENEPLKSLQLAAEKIIN
GNRTEAGEITLSMINENSSCSYSLDLEKSVLEVIPKGSKLDVPHSLSDPVVYLFNAMRTM
STYEAAKDAYQKFNRSAPIVKNLVMEIIKNNREEDYGLALQALNNVAKNQNDREILRLLS
IIQLKLGMKKEALVSLQQLSILSPSFFRKLKSTINKLFIE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaccagattcagcgtgacaagcgcttgattgatgggggacttactgacgca
aaacaatatatagcagagaagaaatatgatgaatgcaagaaaatattatcaagaataact
cctacagctcgaagacttgaatatcatgtatttgaaacatgttttatgacttgtatgatg
cacatgaagacagaaaactacgctgaagcacgaaaatttgctgaagaatgcactcgtctt
aagccagatgatgcattaccatggaaatccctaattcaaatcgatattgactcaaaaagc
acaaatttacttaacacgattacacgtgcattagaaatttgtcaaccagacttagcaatt
ctcaaacaaattgcgccacatttaattcctctcgatgatgagaacttaataaaccaattt
gttcgactattagactcagtagatggtgccttgatgcttccgattactgctatgttacca
gaaacaccaaatacattagatatcagattaaaaatgcttaaacttcaagctcctaaagat
ttacaagcatgctcacgattgatacatactattcttgaagaatccgacatattccaagct
cctcattggattcaaacccttccaatcgataatcaagatcgaatttacgtagaaacacta
tttggcgatgaacccttacaatcagccgaaaagcatattgctggaggttcctatatcttc
aaagattttgtcagagcggctaaaaaacgagatcttactttattaaggaattctttaatg
gtaattccaccttttgtcagtggctggatgtattacatcaatcttattaacgatcctact
gttcgtcttcaagcaattaacgatgcaattatgaaatttccaaattatgttccattatta
gtgaaactcagcgaaacgaaagaagaacttggtgatacgcaatcagccatcaatattata
aacgaaatcatcaagaatgatccatgtaaaggcactcctttgttaataagaattttgatc
agactcgggcgcggccaagaagccgagaaactattagaagatgatgtccataatgtcatc
acacaagaggaacgcacaatgatcgatctccttatgtacagacatgacaaaaacaagaaa
agactccaaaacatattaaattgcaaatctgattcgccaaaaatcattgtagcgaaagcg
gaagcagcttataatatgatagacgaattgggcgatgcatgcgaaaagtatttcatcgat
gcaatgaaagcagataaaaatgatccaagaggttatttgtattttggtaaatttttactg
gaatacaagaaagatgaggagaaagcggtgtttctgttccagaaagcgtatgatttggga
ttggaagataagtctgctttggaaatgacaagcagaaatcttgcaaaacaaggtaaattc
gaggaaagtttaaatctttgccaaaaagtggatagtgattggtcacacttcagggcagga
ttgattttgcagaaattgggaagacatgaagaagcttgcgaagagtttcagaaagatttg
aaatttaatcctgaaagaagaacttcgtggtcggctcttggacagtcctacgtggtcctt
ggacgtgctaaagctgcaatgagtgtcgcacaagaaataagaaagcacggagagccagat
ttggatttggagttccaattaaacagtttattcgaagctccactcgaatggaaggaagaa
tatagcttgaaagagaaccctctgagatttactgcgtacttacagcaagtaattaccaaa
cttcgaatgtttcaaagatttggtagatttgaaacttgtcactttttaaccttaaatgta
cttccattagttcgcgagtttgtacaaatatggggatctcagagcagcgttctaaagctt
tgtggcgactattttgttgaagaatttctgattgaaaaggataaatctttcttaaacgaa
ggccaagtatgtttcatgaagcgttgcgagatagataggagggcagaagcattcatagac
ctcgctcgtgttcttaatctcaaagatttacctgaccaagcaacactcgttctcagaaga
gctgtaaaatcatttacagaccactcaggagtctggatgagccttggaatatcctttgct
ctctcaaaacagtactcttacgcaagacattgcttatgtgttgccgcaaagctcgctacg
tctatggaaatggcaagatcttacgcctgtgttgctgccattgctcttcttatcgatgat
gagaagctccttgatacagcaacgaatgcagcaagatcatttaacccttacgacccagat
gtatggcaaattttgatcaaaaccgagaaagttaatcgattcgatgcatctaagatcgct
ttcgagtttggatcgtccagattaattattccaaatttgccactctttgctttgatgagt
ggagaaacgtctgatgccttaaacttctcatttatgggcgaagatactaacgcaatttca
tttgcgttcgaagctctcaaaaaatacgattttgctcttctttttgcgaacaaagatgac
aaagaaaggattgagagactgaatctcctcaactccaaatctaaaatcagcaaaatcgat
aaaaaggaagaaaatgaacctttgaaatctttacaattagccgcggaaaagataataaac
ggaaacaggacagaagctggagagatcactttatcgatgatcaacgagaactccagttgc
tcatattcacttgacctcgaaaagagcgttttggaggtcattccgaagggatctaaatta
gatgtgcctcattctttatctgatcctgttgtctacttgttcaacgcaatgagaacaatg
agtacgtatgaagctgctaaggatgcctaccagaaattcaacagatctgctccaattgtc
aaaaatctggtaatggagattataaagaataatagagaagaagattatggattggcttta
caggctcttaacaatgtcgcgaaaaatcaaaatgatagagaaattttgagattattgtca
attattcagttgaaactcggaatgaagaaggaagctttggtttctctgcaacaattgtca
attctttcgccaagctttttcagaaaactgaaaagtactattaataaattgtttattgaa
taa
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