Trichomonas vaginalis: 4774796
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Entry
4774796 CDS
T01022
Symbol
TVAGG3_1001110
Name
(RefSeq) tetratricopeptide repeat protein 37 family
KO
K12600
superkiller protein 3
Organism
tva
Trichomonas vaginalis
Pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4774796 (TVAGG3_1001110)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4774796 (TVAGG3_1001110)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
4774796 (TVAGG3_1001110)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_16
ANAPC3
TPR_11
TPR_CcmH_CycH
TPR_17
TPR_15
TPR_TmcB
Motif
Other DBs
NCBI-GeneID:
4774796
NCBI-ProteinID:
XP_001329007
UniProt:
A2DS14
LinkDB
All DBs
Position
I:complement(17280433..17283626)
Genome browser
AA seq
865 aa
AA seq
DB search
MFDQCLKCIEKLPANDLFRLQIEAQFGPNPIESATKHTEKGGTLFKNWLETVNSKNLISI
MREIPKIPNFFAGYRHFTSLDIPNEVKLLWAQAIANNFPKFEVALEYSIDLMEQIGKHND
ALEVIKKLDEISPGKAKIKKFNVYMASGQTDKAVELKDSMNDISGEDKYKLDLEIWKKTR
DDQILYKILDLEDTKELAVIKSKAVNMLGPKLEKDVAIQKFTNLLKLDQENGILFYLFGK
YMINVVKDTQKGEFLLKKSIDLGYNSEDGYDVYTKDLIASGELDKALEYCKRAKAKWSSF
RRGLIFFKQQKFSEAESEILDYLKDKDENADAWVILGFIYLSLGKMMACSQVIEKLDILG
SRNQELVQRFEFFYEKLILTFPLKIEQFEIERTPYLFNIYLKLIIGKIREYRVFNRIESI
SLFIENTNPFIEIYLQKWGHLATVMKIVSDYYIEVFKTTKDASILENCQKLLMKRCENDR
RGESFIDLARVMSLRGADNHALVVLRRAVKAFPDNPNVWLSLAITFINNNRYDFAMHCLT
AASKISQEKEKSVALSMISALSYLLLDDHTTATKAVEESLVLDEMNKFGWEMKAIMNKEN
PLNFLKLAFEYGSEKVTNNLADYSLLNNELNQSLGYAFLSNDKEKISLALENQGNYEMSL
LFTTKESQKHHLRDLESNDEKDASKYIQMNNKYGNLGVASCLLSQGRKEDAIKVLNKTID
LFDSIEIKDMLINMTNQLSQSSQMKFNQKNPLNILRIELLKSNDKLDTYYHAFLEDKQNI
DFLRLFITQCLNSESIPKYMEADLGLAISNIGKVSASRDSIYLQIIYFIRYGKKAKARHA
IQTLSVLSPTKARSLLKLIPKYQLY
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcagtgtttaaagtgcattgagaagcttcctgcaaatgatttgtttagatta
caaattgaagcccaattcgggccaaatccaattgaatctgcaactaaacatacagaaaaa
ggtggtacactattcaaaaattggttagaaaccgtaaattccaaaaatttaatttcaatc
atgagagaaattccaaaaattccaaacttttttgccggatatcgccacttcacatcactt
gacattccaaacgaagtcaaattgttatgggcgcaagcaattgcaaataattttccgaaa
ttcgaagttgcattagaatattctattgatttaatggaacagattggaaaacataatgat
gctcttgaagttatcaaaaaattggatgaaatttccccaggaaaagcgaagattaagaaa
tttaatgtttatatggcatcaggacaaacagataaagccgtagaacttaaagattcaatg
aatgatatcagtggtgaggacaaatataagctagatcttgagatttggaagaaaacaaga
gatgatcaaattttatacaaaattcttgacctcgaagacacgaaagaactggctgttatc
aagtcaaaagccgtcaacatgcttggtccgaagctcgaaaaagacgtagcaattcaaaaa
tttacaaatttgctaaaactcgaccaagaaaacggaattctcttttatcttttcggtaaa
tacatgataaatgttgtaaaggacacccaaaaaggtgaatttctccttaaaaagtcaatt
gatttaggatataattcggaagatggctacgatgtctatacaaaggatctcatagcaagt
ggagaactcgataaagcacttgagtactgcaaacgagccaaagcaaagtggtcttcgttc
agaagaggattaattttcttcaaacaacaaaaattcagtgaagccgagtccgaaatcctt
gactacctgaaagataaagacgaaaacgccgatgcctgggtaattttggggttcatttat
ttatcactcggaaaaatgatggcctgctcacaagtgattgagaaattggatatattaggt
tctagaaaccaagaattggtccaaagattcgaatttttctatgaaaaattaattctgaca
tttcctctcaaaatcgaacaatttgaaattgagaggacaccctatttattcaatatttat
ttgaaattgatcataggaaaaatcagagaatacagagtattcaacagaattgaatcaatt
tcattgtttattgagaatacaaatccattcattgaaatttacttgcaaaaatggggacac
ttagcaacagtcatgaaaattgttagtgactattacattgaagtgttcaaaaccacaaaa
gacgcatcaattcttgagaattgccaaaaattattaatgaaaagatgcgaaaacgacaga
agaggcgaatcattcatcgatctagcacgagtcatgtctcttagaggtgccgataaccac
gcacttgttgtattacgtagagctgtgaaagcatttccagataatccgaatgtttggctc
agtctggccattaccttcataaacaacaacagatatgactttgcaatgcattgcctcaca
gcggcttccaagatttctcaagaaaaagagaaatcagttgcattgtcaatgatttcagct
ctttcttaccttcttctcgatgaccacacaactgctacaaaggctgttgaagagagcttg
gttcttgacgaaatgaacaagttcggatgggaaatgaaagcaataatgaacaaagaaaat
cctttgaatttcttaaaattggcttttgaatatggttctgaaaaagtgacaaataatttg
gccgattactcattattaaacaatgaactaaatcagtcacttggctacgcattcctctct
aatgacaaagaaaaaatttcgttggcattagaaaatcaaggaaattatgaaatgtcactt
ttgtttacaactaaagaaagtcaaaaacatcatttaagagacttagaaagtaatgatgag
aaagatgcaagcaaatacatacaaatgaataacaaatatggaaatttgggtgttgcttct
tgtttgttgagccaaggaagaaaagaagatgcaattaaagtattgaacaaaacaattgat
ttatttgacagtattgaaatcaaggatatgctaattaacatgacaaatcagttgtcacag
tcttctcaaatgaaatttaatcaaaagaatcctttgaacattttgagaattgaattactg
aaatctaatgataaattggatacttactaccacgctttcttagaagataaacagaatatt
gactttttgagattgtttattacacaatgtttgaattctgaaagtattcctaaatacatg
gaagcagatttaggtttggcaatttcaaacattggaaaagtttctgcatcaagagattcc
atttatttgcaaattatttatttcattagatacggaaagaaggctaaagctcgccatgcc
atccaaactctttctgttttatctcctacaaaagctagatcacttctcaaattgattccg
aaatatcaattatattaa
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