Trichomonas vaginalis: 5466993
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Entry
5466993 CDS
T01022
Symbol
TVAGG3_0999300
Name
(RefSeq) DNA polymerase alpha catalytic subunit family
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
5466993 (TVAGG3_0999300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tva03032
]
5466993 (TVAGG3_0999300)
Enzymes [BR:
tva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
5466993 (TVAGG3_0999300)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
5466993 (TVAGG3_0999300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
5466993
NCBI-ProteinID:
XP_001582431
UniProt:
A2DDR9
LinkDB
All DBs
Position
I:complement(16967213..16971316)
Genome browser
AA seq
1367 aa
AA seq
DB search
MSEKGQTDETQSYIDSDSEQIADSIIPDEQEQSNPELKAISPLRETIYSDIVTSSLSLKR
SSDNNDQDIDFVCDADGIIPLSLTKTVEKVEKYNFNFGKELTLKQVPKITYDVRLVDENT
IDFFLLHIHEEDNKLFLFGKNVCIDTSTTICIQITNPIYYLYFYPIVGHEDDLIDEIREL
SIEMNGYLISYEYKNLNYCFGTENLDKNTKWLECQLPATCDVKNFPQNGKNYFLLIGRTY
SLTENFEMTQKIKGPQFLRAKNLTQKDPVTFCPMFCVNSIFDVEIIEKKIDRLPPPLNVC
VISIGTYFNEEKKTHEIYLLNVRVFMNHKFHKYQDNIVHTFITSPSPDIKLRTELIFTNL
KSDKSRHHSKSDKSKNTNKHKEKSKNSKSDNTNKNEEISHISKSDINKSDKAKASDTKNQ
NEEKHKIPKSDTNKSDKDKGEKVNDEIFVGNETKCDKFKDDKTQTREVLLEAEEYVEPKQ
EDTKLNANLSERVTFYSSEKKLLKNFVRLIDKLDIDILASYTMFTNDIQVIFDRMKTLNV
EEWFRIGRLNRSTQIKTSKYNASFCLSGRIAVDIRTNLREFLNLPANDLSSVSLQEFGIK
RQQIENVDILKEINDRNKVISLIEFFERDTNILTKLMEKTNLLEITFRLSQISGLLWCKT
LKSKPSYRCESILLHSFKEKNFVLPDKKQKADFAPKSKLGKYRGATVLQPKKGFYDTIIV
LLDFTSLYPSIISEYNLCFTTVDKRNPNSEEAVNCGRKGILPEIMENLTKMRIELKNKMN
TLQDDKFNFDRFLIKQQAIKSLSNSIYGYLGFSLSRFASNEIAALITERGRFVLQKTVET
VESLGKFSVIYGDTDSVMVNTGTKSVEEAKKIANDISEKVTKQYKFLKLTVSGLFTKMLL
VAKKKYAVTVYDDDNKCHREVKGLDMVRRDWCQLTKYLSSFVLDQMMNNDDRSLTVRNCL
SEFHNVAKLLRKSNNDEQNSLFYYDENFSLHNKSNKNDVDKKNDKINSNENEKQNSKNEL
KSDKINSKENDKENSKNSVNENESKSETKDKINSNENDDEQKSVNFLSKSDTESSSIPNY
QEVKSYSSSLKSDKSDTKSDGEESNSSKSFHLKKITKEMLIIYRQLNKKISEYSDKRNNP
HVSIALRMMKRGEKVPQHATIPMIVTSPDVRELCDKVKLPDEVKDMSEIDSQWYLVNQIL
PPIIRLFAPYEHVGSSTIGRSLGLTVMETKKNINDSYENSFNEDIPHQRELFYQCQLCGK
KIRFARDYLCSLRCSNCCETHNWKIVSNLLVQNVREFISESVKDNMNDSELHSTLRYFLG
IFTNKKVLTEDDEDFEEFRCYMERRISSMLDGHIYNHVDISSLISFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaaaggacaaacagacgaaactcaatcttatattgattcagattcagaacag
attgcagatagcataattccagatgagcaagagcaatcaaatccagaattaaaagcaata
tctccattaagagagacaatttatagcgatatcgttacatcatctcttagtttaaagaga
tcatcagataataatgaccaagacattgattttgtctgtgatgcagatggaattattcct
ttatcattgacaaaaacagtcgaaaaagtcgagaaatacaacttcaatttcggaaaagag
ctaactctcaaacaagtaccaaagattacatatgatgtcaggttagttgacgaaaataca
atcgacttcttcttgttacacatacatgaagaagataataagctttttctattcggaaag
aacgtttgtatcgatacatccacaactatttgcatacaaattacgaatccaatttattat
ctctatttttatccgattgtcggccacgaagatgatttaattgatgaaattagagaacta
agtatcgaaatgaatggatatcttatcagttacgagtacaaaaatctaaattattgtttt
ggaacagaaaatttagacaaaaacacgaaatggttggaatgccaacttccagcaacttgt
gatgtgaagaacttccctcagaatggaaagaactacttcttgttgataggaagaacatac
agtttgacagaaaattttgaaatgactcagaaaattaaaggacctcaatttttgagagcg
aaaaatttgacacaaaaagatcctgtcactttttgtccaatgttttgtgttaattctatt
tttgatgtagaaatcattgagaagaagatcgacagattaccaccgccattgaatgtttgt
gttatatctattggaacttattttaatgaagaaaagaaaactcatgagatatatctattg
aatgtcagagttttcatgaaccataaattccataaatatcaggataacattgttcacact
ttcataacttcgcctagtcctgatataaaacttagaactgaattaattttcactaattta
aaaagtgacaaatcacgtcatcattcaaaaagtgacaaatctaagaacacaaacaaacac
aaagagaaatcaaaaaattcaaaaagtgacaacacaaacaaaaatgaagaaatatctcat
atttcaaaaagtgacataaataaaagtgacaaagcaaaagcttctgatactaaaaatcaa
aatgaagaaaaacataaaatcccaaaaagtgacaccaataaaagtgacaaagataaagga
gaaaaagtgaatgatgaaatttttgttggaaatgaaacaaaatgtgacaaatttaaagat
gataaaacacaaacaagagaagtattgttagaagctgaagaatatgttgaaccaaaacaa
gaagatacaaaattgaatgcaaatttgtcagaaagagtcactttttattcatcagagaag
aaacttttgaaaaactttgttagattgattgacaaacttgatattgatattttagcatca
tatacaatgtttaccaatgatatccaagtaatatttgacagaatgaagacattaaatgtc
gaagaatggttcagaattggaagattaaacagatccacacaaataaaaacatcaaaatac
aacgcaagtttctgtttgagtggaagaattgctgtagatattagaactaatttaagagaa
tttctgaatttgccagcaaatgatttatcatctgtttctctccaagaattcggaatcaaa
agacaacaaatagaaaatgttgacattttgaaagaaatcaacgatagaaataaggttatt
tctttgattgaattttttgaaagagatacgaatattttgacgaaattgatggagaaaaca
aatctcttagaaatcacattcagactcagtcagatttctggattgttatggtgtaagacc
ctcaaatctaaaccatcatatagatgcgaatcaattttgttgcattctttcaaagagaaa
aattttgttttaccagataaaaaacaaaaagcggatttcgctcctaaatctaaactcgga
aaatacagaggagcaacagttcttcagccaaagaaaggtttttatgatacaattatcgtt
ttacttgacttcacttcactttatccatccattatttctgaatacaatttatgttttact
actgttgataaaaggaatccgaactctgaagaagcagtgaattgtggaagaaaaggaatt
ttgccagaaatcatggaaaatttgacaaaaatgagaattgaattgaaaaacaaaatgaat
actttacaagacgataaattcaattttgacaggtttttaattaagcagcaagcaattaaa
tccttgtcgaattctatttacggttatttaggtttttctttgtcacgttttgcttcaaat
gaaattgccgcattaattacagaaagaggtcgatttgttttacagaaaacagtggaaact
gttgagagtttgggaaaattttctgttatttatggagatacagattcggtcatggtaaat
acaggaactaaatctgttgaagaagcaaaaaagattgcaaatgatatttctgaaaaagtg
acaaaacaatacaaatttttgaagttaactgttagtggattattcactaaaatgctgtta
gttgcaaagaagaaatacgctgttactgtttatgacgacgataataaatgtcatcgagaa
gtgaaaggattagatatggtcagaagagattggtgccaactaacgaaatatttatcatct
tttgttttggatcagatgatgaataacgacgacagatctttgacagttagaaattgtttg
tctgaattccacaatgttgcaaaattacttagaaaatctaataatgatgaacaaaattca
ttgttttattatgatgaaaatttctctcttcataataaatcaaataaaaatgatgttgac
aaaaagaatgacaaaattaattcaaatgaaaatgaaaaacaaaactctaaaaatgaatta
aaaagtgacaaaataaattcaaaagaaaatgataaagaaaattctaaaaatagtgtgaat
gaaaatgaatcaaaaagtgaaacaaaggataagattaattctaatgaaaatgatgatgaa
caaaaaagtgtcaattttctatcaaaaagtgacacagaatcaagttctattccaaattat
caagaagttaaaagttattcttcttcattaaaaagtgacaaatctgacacaaaaagtgac
ggtgaagaaagcaattcatctaaatcatttcatttgaagaaaattacaaaagagatgttg
attatttacagacaattaaacaagaaaatcagtgagtattcagacaaaagaaataatcct
catgtttctatcgcattgagaatgatgaaaagaggagaaaaagttccacaacatgcgacg
ataccaatgatagtcacttcacctgatgttagagaattatgtgacaaagtgaagttgcca
gatgaagtgaaagacatgtcagaaattgacagtcaatggtatcttgtcaatcaaattttg
ccaccaataattcgcttgtttgctccttatgaacatgttggaagttcaacaattggaagg
agtttgggattgacagtcatggagacaaaaaagaatattaatgattcatatgagaactca
tttaatgaagatattccacatcaacgagaattgttttatcaatgtcaattatgtggtaaa
aagattagatttgcacgagattatttgtgttcattgagatgcagtaattgttgtgaaaca
cataattggaagattgtttcaaatttattagtacaaaatgtacgagaatttatatcagaa
tctgtgaaagataacatgaatgattctgaattacattcaacattgcgatattttcttgga
atattcacaaacaaaaaagtattgaccgaagatgatgaagacttcgaagaattcagatgt
tacatggaacgacgaatttcctcaatgcttgatggacacatttataaccatgttgatatt
tcttctttaatttcttttaaataa
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