Tachysurus vachellii: 132841141
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Entry
132841141 CDS
T09596
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132841141 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132841141 (smarcd2)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132841141 (smarcd2)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132841141 (smarcd2)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132841141 (smarcd2)
PBAF complex
132841141 (smarcd2)
GBAF(ncBAF) complex
132841141 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DUF6532
Motif
Other DBs
NCBI-GeneID:
132841141
NCBI-ProteinID:
XP_060719337
LinkDB
All DBs
Position
2:complement(20865946..20876052)
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AA seq
516 aa
AA seq
DB search
MASRAAFPTTPGAPVMNSGINSPGHPRMAAMNPAYRAMPNPVNQYPRPAVPPGRTMPMGS
MGSPMPGPSYSGSMTVRPSMPQTAMDSARKRLLQQQAGAVMGPRRGLKRRKMADKVLPQR
IRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITVTPKSCQKRKLRIYISNSC
TPAKPEGEESEKVASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEW
HRMPTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQA
LWLYIKNNKLQDCHEKEYINCNRYFRQIFACHRMRFSEIPMKLAGLLQHPDPIVINHVIS
VDPNDQKKTACFDIDVEVDDPLKSQMISFLSSTTNQQEIAALEMKIHETIESINQLKTQR
DFMLSFSNNPQDFIQDWLKSQSRDLKLMTDTAGNTEEERRTEFYQAPWIQEAVGRYVFSK
KSVSLSWWFSGPAEETGAGAGTRDPPHLNPRGITVS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagagcggcgttccctactacaccgggcgccccggtgatgaactccggtata
aactctcctggccacccgcggatggcagccatgaatccggcctaccgagcaatgccgaac
ccagttaaccagtatccgcgtcctgctgtccctcctggccgtaccatgccaatgggtagc
atgggttctccgatgcccgggccgtcatacagcgggtctatgaccgttcgacccagcatg
ccccagaccgcgatggactcggcacgcaagagactccttcaacagcaggcaggggcggtg
atgggacctcggagagggctgaaacgacgcaaaatggctgacaaagttctaccccagagg
atccgggacctggttcctgagtctcaggcctacatggaccttctggcttttgagaggaag
ctggaccagaccattgctcgcaagcgaatggagattcaggaggccatcaagaagcctatc
acggtaacaccaaaaagctgtcaaaagcgcaagctgaggatctacatctcaaactcctgc
acacctgccaaacctgagggggaagagtcggagaaagtggcatcatgggagcttagagtg
gagggcaaactcctggaggatcctgggaaacagaaaagaaagttttcttccttctttaaa
agtcttgtcattgagctggataaggagctgtatggtccagacaaccacttggtggagtgg
cataggatgccgaccactcaggagacagacggctttcaggttaagcggcctggagacgtg
agtgtgaaatgcacactgctgctcatgctggaccaccagccaccacagtacaagctggac
ccgcggttagcacggctcctgggcgttcacactcaaacccgagccagcatcatgcaggcg
ctctggctctacatcaagaacaacaaactgcaggactgtcatgagaaagaatatataaac
tgcaaccgctacttcagacagatcttcgcctgccaccgaatgaggttctcagagatcccc
atgaagctggcgggactcctacagcacccggaccccattgtcattaaccacgtcatcagc
gtggacccgaatgaccagaagaagactgcgtgcttcgacatagatgtagaagtggacgat
ccgctgaagagccagatgatcagctttctctcttccaccaccaaccagcaggaaattgca
gccctggagatgaagatccatgagaccattgagtcaataaaccagctgaaaacgcagcga
gactttatgctgagcttcagcaacaaccctcaggactttatccaggactggctcaagtct
cagagccgagaccttaagttgatgacagacactgctgggaacacagaggaggagaggagg
accgagttctaccaggctccctggatccaggaggctgtgggccgctacgtattctccaag
aaatcagtcagcttgtcttggtggttctcaggtccagcagaggagacaggagctggagca
ggtactcgggatccgcctcacctaaaccccagaggaattacagtgtcttaa
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