Tachysurus vachellii: 132848938
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Entry
132848938 CDS
T09596
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04141
Protein processing in endoplasmic reticulum
tvc04210
Apoptosis
tvc04217
Necroptosis
tvc04218
Cellular senescence
tvc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132848938 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132848938 (capn1)
04217 Necroptosis
132848938 (capn1)
04218 Cellular senescence
132848938 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132848938 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132848938 (capn1)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
132848938 (capn1)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C2: calpain family
132848938 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
132848938
NCBI-ProteinID:
XP_060731032
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All DBs
Position
7:22717432..22743784
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AA seq
704 aa
AA seq
DB search
MEPIYATGMAAKLRSQWDRDEGLGQNHNAVKLYGQDYEMLRVQCLQSRTLFEDSNFPACT
TSLGFKELGPRSSKTQGVRWMRPPEFCSRPQFIMDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQSFSEGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGCE
FWSALVEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELRKPPADLYHIIRRAVERG
SLLGCSIDISNSSDMEAVTFKKLVKGHAYSVTGVEEVSYRGTPTKLVRIRNPWGEMEWTG
AWSDNAREWDSVDASSRSKLHNRSEDGEFWMSFTDFLREFSRLEICNLTADALETSQVKK
WSTSLYQGEWRRGSTAGGCRNYAATFWLNPQFKIKLVHPDMSGQNDCTFLVALMQKDRRK
QRKEGKDMETIGFAIYEVPSQFVGQTGVHLKKDYFLTHGSTARSELFINLREVSSRFRLP
PGEYIIVPSTFEPQKEADFVLRVFSEKPADSVEMDDEIKADLPEVKCLDESQIDAGFKSL
FRQLAGADMEISVTELQTIMNRIISKHKDLKTDGFSQEACRSMINLMDTDGSGKLGLTEF
HVLWEKIKNYLEVFRKFDVDKSGTMSSYEMRMALESAGFKLNNHIFQLIILRYTEQDLTV
DFDNFVTCLVRLETMFKTFYTLDTDSDGIVSLNFNQWLSLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcctatttacgctacgggaatggcggccaagctgcgcagtcagtgggatcgagat
gaaggtttgggacagaaccataacgctgtcaagttatacgggcaggactacgagatgctg
agggtgcagtgcctccagagcagaaccttgtttgaggattccaactttcctgcctgcaca
acttcactgggttttaaagagcttgggccccgctcctccaaaacacaaggtgtacgctgg
atgaggccaccggagttctgctctcgcccccagttcataatggatggagccactcgtaca
gatatctgtcagggagcactgggtgattgttggctcctggctgctattgcctctcttacc
cttaatgataacctgctgcaccgtgtggttccacatggacagagcttcagcgagggctat
gctgggatctttcacttccagttctggcagtttggtgagtgggttgatgtggtgattgac
gacaggctgccggttaaagatgggaagctgctgtttgtgcactctgcggaggggtgcgag
ttctggagtgctctggtggaaaaagcctacgccaagctgaatggctgctacgaggctctg
tcaggtggcagtacatccgaaggctttgaggacttcacaggcggtgtgacggagatgtat
gagctgcgcaaacctcctgctgatctttaccacatcataaggagggctgtggagagagga
tcactgctcggctgctccatagatatcagcaattctagtgacatggaggccgtcaccttt
aagaaactggttaaaggccacgcctactctgtaacaggagtggaggaggtgtcttacaga
ggaacccccaccaagttggtgcgcatcagaaatccctggggagaaatggagtggactgga
gcttggagcgataatgctagagagtgggacagtgtggatgcatccagcaggagcaaactg
cataaccgcagtgaagatggagagttctggatgtctttcacggacttccttcgggagttt
agcaggttggagatctgtaacctgacagctgatgctttagaaaccagtcaggtgaagaag
tggagcacatcattgtaccagggtgaatggaggagaggcagcacagctggaggatgcaga
aactatgcagctacattctggctcaaccctcagtttaagatcaaactggtgcacccagat
atgtcaggacaaaacgattgcactttcctagtggctctcatgcagaaagaccgcagaaaa
cagcgcaaagagggcaaagacatggagaccatcggctttgcgatttacgaggtccccagt
cagtttgtaggccagacaggagttcacttgaagaaagactatttccttacacatggttcc
accgcacgctctgagctcttcatcaacctgcgtgaggtcagctcacgcttccgccttcct
cctggagaatacatcatcgtcccgtccacgtttgagccacagaaagaagctgacttcgtg
ttgcgtgttttctctgaaaaacctgctgactctgtggaaatggatgacgaaatcaaagct
gatcttcctgaagtgaaatgtttggatgagagccaaatcgatgctggattcaagagtctc
ttcagacagctggcaggagcggacatggagatcagtgttacagagctccagaccattatg
aacagaatcatcagcaagcataaagatctgaagacagacggcttcagccaggaagcgtgt
cgcagtatgatcaaccttatggatacagatggcagcggtaagctgggcctcacagagttc
catgtgctgtgggagaaaatcaaaaactatctggaagtgttcaggaagtttgatgtggac
aagtcaggcacaatgagctcatatgagatgcgaatggctcttgaatcagcaggcttcaag
ctgaacaatcatatattccagctgattattctgcgctacacagagcaggacctaacggtc
gacttcgacaactttgtcacctgtctagtgcgcctggagacaatgttcaagactttttac
accttagacactgactcggatggaatcgtgtccctaaacttcaaccagtggctatccttg
accatgtttgcttaa
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